Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11940

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
2,397,465	+		A4249_RS11935	0.15	+0.4
2,397,465	+		A4249_RS11935	0.15	+0.2
2,397,466	-		A4249_RS11935	0.15	-0.1
2,397,475	+		A4249_RS11935	0.16	-0.2
2,397,475	+		A4249_RS11935	0.16	-0.2
2,397,475	+		A4249_RS11935	0.16	-0.8
2,397,475	+		A4249_RS11935	0.16	+0.1
2,397,475	+		A4249_RS11935	0.16	-0.0
2,397,475	+		A4249_RS11935	0.16	+0.4
2,397,476	-		A4249_RS11935	0.16	+0.5
2,397,476	-		A4249_RS11935	0.16	-0.5
2,397,476	-		A4249_RS11935	0.16	-0.4
2,397,476	-		A4249_RS11935	0.16	+1.1
2,397,476	-		A4249_RS11935	0.16	-0.4
2,397,476	-		A4249_RS11935	0.16	-0.6
2,397,476	-		A4249_RS11935	0.16	+0.0
2,397,476	-		A4249_RS11935	0.16	-1.4
2,397,476	-		A4249_RS11935	0.16	+0.9
2,397,476	-		A4249_RS11935	0.16	-0.1
2,397,476	-		A4249_RS11935	0.16	-0.4
2,397,476	-		A4249_RS11935	0.16	-0.9
2,397,476	-		A4249_RS11935	0.16	-0.5
2,397,592	+		A4249_RS11935	0.28	+0.8
2,397,592	+		A4249_RS11935	0.28	+0.5
2,397,651	+		A4249_RS11935	0.34	-2.0
2,397,652	-		A4249_RS11935	0.34	-0.2
2,397,652	-		A4249_RS11935	0.34	+0.0
2,397,747	+		A4249_RS11935	0.43	-0.3
2,397,747	+		A4249_RS11935	0.43	-0.9
2,397,747	+		A4249_RS11935	0.43	+0.5
2,397,747	+		A4249_RS11935	0.43	-0.9
2,397,747	+		A4249_RS11935	0.43	-0.7
2,397,747	+		A4249_RS11935	0.43	+1.1
2,397,747	+		A4249_RS11935	0.43	-0.1
2,397,747	+		A4249_RS11935	0.43	+0.0
2,397,747	+		A4249_RS11935	0.43	-0.3
2,397,747	+		A4249_RS11935	0.43	+0.0
2,397,747	+		A4249_RS11935	0.43	-1.3
2,397,748	-		A4249_RS11935	0.43	-0.5
2,397,748	-		A4249_RS11935	0.43	-1.3
2,397,748	-		A4249_RS11935	0.43	-0.6
2,397,748	-		A4249_RS11935	0.43	-0.3
2,397,748	-		A4249_RS11935	0.43	-1.0
2,397,748	-		A4249_RS11935	0.43	-0.6
2,397,748	-		A4249_RS11935	0.43	+0.1
2,397,748	-		A4249_RS11935	0.43	-1.2
2,397,748	-		A4249_RS11935	0.43	+1.0
2,397,748	-		A4249_RS11935	0.43	-0.5
2,397,765	+		A4249_RS11935	0.45	-0.5
2,397,765	+		A4249_RS11935	0.45	+0.0
2,397,765	+		A4249_RS11935	0.45	-0.7
2,397,765	+		A4249_RS11935	0.45	-0.2
2,397,766	-		A4249_RS11935	0.45	-0.2
2,397,766	-		A4249_RS11935	0.45	+0.6
2,397,766	-		A4249_RS11935	0.45	+0.3
2,397,766	-		A4249_RS11935	0.45	-0.9
2,397,766	-		A4249_RS11935	0.45	+0.3
2,398,011	+		A4249_RS11935	0.69	+0.8
2,398,011	+		A4249_RS11935	0.69	-0.0
2,398,011	+		A4249_RS11935	0.69	-0.1
2,398,011	+		A4249_RS11935	0.69	+2.2
2,398,012	-		A4249_RS11935	0.69	+0.8
2,398,012	-		A4249_RS11935	0.69	-0.4
2,398,012	-		A4249_RS11935	0.69	-0.8
2,398,012	-		A4249_RS11935	0.69	-0.4
2,398,012	-		A4249_RS11935	0.69	+0.4
2,398,012	-		A4249_RS11935	0.69	+0.2
2,398,012	-		A4249_RS11935	0.69	-0.2
2,398,357	+				+0.3
2,398,357	+				+0.0
2,398,357	+				+1.4
2,398,358	-				+1.6
2,398,358	-				-0.9
2,398,365	+				+0.5
2,398,365	+				-0.5
2,398,366	-				-0.7
2,398,366	-				-0.1
2,398,366	-				-1.0
2,398,366	-				-0.0
2,398,366	-				-1.7
2,398,366	-				-0.3
2,398,372	+				-1.3
2,398,372	+				+0.4
2,398,373	-				+0.1
2,398,373	-				+0.7
2,398,373	-				+0.1
2,398,373	-				-0.1
2,398,442	+				-0.5
2,398,443	-				+0.8
2,398,509	+		A4249_RS11940	0.17	+0.7
2,398,509	+		A4249_RS11940	0.17	-0.1
2,398,510	-		A4249_RS11940	0.18	-1.6
2,398,510	-		A4249_RS11940	0.18	+0.1
2,398,510	-		A4249_RS11940	0.18	+0.2
2,398,524	+		A4249_RS11940	0.19	+0.5
2,398,525	-		A4249_RS11940	0.19	+0.8
2,398,525	-		A4249_RS11940	0.19	-0.6
2,398,525	-		A4249_RS11940	0.19	-0.5
2,398,525	-		A4249_RS11940	0.19	-1.4
2,398,525	-		A4249_RS11940	0.19	+0.4
2,398,569	+		A4249_RS11940	0.25	+1.2
2,398,569	+		A4249_RS11940	0.25	-0.4
2,398,569	+		A4249_RS11940	0.25	-0.5
2,398,569	+		A4249_RS11940	0.25	+2.3
2,398,569	+		A4249_RS11940	0.25	-1.4
2,398,569	+		A4249_RS11940	0.25	+2.8
2,398,569	+		A4249_RS11940	0.25	-0.9
2,398,570	-		A4249_RS11940	0.25	+1.7
2,398,807	+		A4249_RS11940	0.53	+0.9
2,398,808	-		A4249_RS11940	0.53	-0.7
2,399,020	+		A4249_RS11940	0.79	+0.2
2,399,020	+		A4249_RS11940	0.79	+0.6
2,399,020	+		A4249_RS11940	0.79	+0.2
2,399,020	+		A4249_RS11940	0.79	+0.3
2,399,020	+		A4249_RS11940	0.79	-1.6
2,399,021	-		A4249_RS11940	0.79	+0.8
2,399,021	-		A4249_RS11940	0.79	-1.4
2,399,021	-		A4249_RS11940	0.79	+1.1
2,399,021	-		A4249_RS11940	0.79	+0.6
2,399,021	-		A4249_RS11940	0.79	+0.6
2,399,021	-		A4249_RS11940	0.79	+0.6
2,399,021	-		A4249_RS11940	0.79	+0.6
2,399,021	-		A4249_RS11940	0.79	+0.3
2,399,021	-		A4249_RS11940	0.79	-0.2
2,399,021	-		A4249_RS11940	0.79	+0.4
2,399,021	-		A4249_RS11940	0.79	+1.9
2,399,022	+		A4249_RS11940	0.79	+0.9
2,399,022	+		A4249_RS11940	0.79	-0.4
2,399,022	+		A4249_RS11940	0.79	-0.1
2,399,022	+		A4249_RS11940	0.79	-0.4
2,399,022	+		A4249_RS11940	0.79	-1.0
2,399,022	+		A4249_RS11940	0.79	+0.3
2,399,022	+		A4249_RS11940	0.79	+0.8
2,399,022	+		A4249_RS11940	0.79	+0.4
2,399,022	+		A4249_RS11940	0.79	+0.3
2,399,023	-		A4249_RS11940	0.79	-0.1
2,399,023	-		A4249_RS11940	0.79	-0.2
2,399,023	-		A4249_RS11940	0.79	-1.2
2,399,023	-		A4249_RS11940	0.79	+1.8
2,399,023	-		A4249_RS11940	0.79	+0.3
2,399,023	-		A4249_RS11940	0.79	-0.5
2,399,023	-		A4249_RS11940	0.79	-0.2
2,399,023	-		A4249_RS11940	0.79	+0.5
2,399,066	+		A4249_RS11940	0.84	-1.1
2,399,067	-		A4249_RS11940	0.85	-0.5
2,399,097	+		A4249_RS11940	0.88	+0.5
2,399,097	+		A4249_RS11940	0.88	-1.4
2,399,097	+		A4249_RS11940	0.88	-1.2
2,399,098	-		A4249_RS11940	0.88	-0.6
2,399,098	-		A4249_RS11940	0.88	+1.7
2,399,098	-		A4249_RS11940	0.88	+0.3
2,399,185	+				-0.6
2,399,224	+				+0.2
2,399,224	+				+1.7
2,399,224	+				+0.4
2,399,225	-				+0.3
2,399,246	+				+0.0
2,399,363	+				+0.3
2,399,408	+				+0.2
2,399,426	+				+1.2
2,399,426	+				+0.4
2,399,427	-				+0.7
2,399,432	+				+0.3
2,399,433	-				-0.4
2,399,464	+				-0.1
2,399,464	+				-0.3
2,399,465	-				-0.5
2,399,468	+				-0.7
2,399,468	+				+2.1
2,399,468	+				+1.5
2,399,526	-				+1.3
2,399,932	+		A4249_RS11945	0.81	+1.3
2,399,932	+		A4249_RS11945	0.81	+1.1
2,399,932	+		A4249_RS11945	0.81	+3.1
2,400,026	-				+0.3
2,400,031	+				+0.3
2,400,031	+				-2.2
2,400,124	+				-0.7
2,400,124	+				-0.1
2,400,124	+				+0.3
2,400,124	+				-1.2
2,400,125	-				+0.1
2,400,125	-				-2.2