Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11065

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
2,225,812	-				-0.4
2,225,818	+				+0.4
2,225,862	-				+0.4
2,225,892	+				+1.4
2,225,892	+				+0.1
2,225,893	-				-1.6
2,225,893	-				-0.3
2,226,119	+		A4249_RS11060	0.34	-0.2
2,226,119	+		A4249_RS11060	0.34	-0.7
2,226,119	+		A4249_RS11060	0.34	+0.5
2,226,119	+		A4249_RS11060	0.34	-0.9
2,226,119	+		A4249_RS11060	0.34	+0.1
2,226,119	+		A4249_RS11060	0.34	-0.3
2,226,120	-		A4249_RS11060	0.34	-0.2
2,226,120	-		A4249_RS11060	0.34	+0.0
2,226,120	-		A4249_RS11060	0.34	+0.9
2,226,141	-		A4249_RS11060	0.37	+0.2
2,226,294	-		A4249_RS11060	0.54	-0.2
2,226,294	-		A4249_RS11060	0.54	-0.3
2,226,384	+		A4249_RS11060	0.64	-0.4
2,226,384	+		A4249_RS11060	0.64	-2.2
2,226,384	+		A4249_RS11060	0.64	-0.2
2,226,384	+		A4249_RS11060	0.64	-0.2
2,226,384	+		A4249_RS11060	0.64	-1.3
2,226,384	+		A4249_RS11060	0.64	-0.8
2,226,384	+		A4249_RS11060	0.64	+0.0
2,226,384	+		A4249_RS11060	0.64	+0.5
2,226,384	+		A4249_RS11060	0.64	-0.2
2,226,384	+		A4249_RS11060	0.64	-0.4
2,226,384	+		A4249_RS11060	0.64	+0.0
2,226,385	-		A4249_RS11060	0.64	-0.8
2,226,385	-		A4249_RS11060	0.64	-1.5
2,226,385	-		A4249_RS11060	0.64	+0.1
2,226,385	-		A4249_RS11060	0.64	+0.9
2,226,385	-		A4249_RS11060	0.64	-0.5
2,226,385	-		A4249_RS11060	0.64	-1.1
2,226,385	-		A4249_RS11060	0.64	-0.4
2,226,385	-		A4249_RS11060	0.64	+0.6
2,226,385	-		A4249_RS11060	0.64	-0.8
2,226,444	-		A4249_RS11060	0.71	+0.3
2,226,575	+		A4249_RS11060	0.86	+0.0
2,226,575	+		A4249_RS11060	0.86	+0.2
2,226,575	+		A4249_RS11060	0.86	-1.0
2,226,576	-		A4249_RS11060	0.86	+0.3
2,226,576	-		A4249_RS11060	0.86	+0.6
2,226,576	-		A4249_RS11060	0.86	+0.3
2,226,757	+				-1.4
2,226,758	-				-0.1
2,226,758	-				+0.1
2,226,785	+				-0.5
2,226,785	+				-0.8
2,226,786	-				+1.2
2,226,787	+				-0.8
2,226,787	+				+0.8
2,226,787	+				+1.3
2,226,787	+				-1.1
2,226,787	+				+0.5
2,226,787	+				+1.1
2,226,787	+				-1.3
2,226,787	+				-0.3
2,226,787	+				-0.2
2,226,788	-				-2.3
2,226,788	-				-0.5
2,226,788	-				+0.4
2,226,788	-				+0.2
2,226,788	-				-0.1
2,226,788	-				-0.1
2,226,871	+		A4249_RS11065	0.19	-0.1
2,226,871	+		A4249_RS11065	0.19	-0.0
2,226,872	-		A4249_RS11065	0.19	-0.5
2,226,872	-		A4249_RS11065	0.19	-1.4
2,226,872	-		A4249_RS11065	0.19	+0.6
2,226,872	-		A4249_RS11065	0.19	-0.5
2,226,872	-		A4249_RS11065	0.19	-0.8
2,226,872	-		A4249_RS11065	0.19	-0.1
2,226,931	+		A4249_RS11065	0.29	-0.1
2,226,931	+		A4249_RS11065	0.29	+0.0
2,226,932	-		A4249_RS11065	0.29	+0.2
2,226,932	-		A4249_RS11065	0.29	-0.1
2,226,949	+		A4249_RS11065	0.32	-2.2
2,226,949	+		A4249_RS11065	0.32	-1.9
2,226,949	+		A4249_RS11065	0.32	-1.2
2,226,949	+		A4249_RS11065	0.32	+0.6
2,226,949	+		A4249_RS11065	0.32	-0.2
2,226,950	-		A4249_RS11065	0.32	+0.5
2,226,958	+		A4249_RS11065	0.33	-1.7
2,226,958	+		A4249_RS11065	0.33	+0.4
2,226,958	+		A4249_RS11065	0.33	-0.6
2,226,958	+		A4249_RS11065	0.33	-0.6
2,226,958	+		A4249_RS11065	0.33	-0.5
2,226,959	-		A4249_RS11065	0.33	+0.4
2,226,959	-		A4249_RS11065	0.33	+0.9
2,226,959	-		A4249_RS11065	0.33	-0.2
2,226,959	-		A4249_RS11065	0.33	-1.8
2,227,121	+		A4249_RS11065	0.60	+1.9
2,227,121	+		A4249_RS11065	0.60	+0.5
2,227,121	+		A4249_RS11065	0.60	-0.1
2,227,121	+		A4249_RS11065	0.60	-0.2
2,227,121	+		A4249_RS11065	0.60	+0.7
2,227,122	-		A4249_RS11065	0.60	+0.3
2,227,122	-		A4249_RS11065	0.60	-1.3
2,227,122	-		A4249_RS11065	0.60	-1.4
2,227,123	+		A4249_RS11065	0.60	+0.8
2,227,123	+		A4249_RS11065	0.60	+0.1
2,227,123	+		A4249_RS11065	0.60	-0.5
2,227,123	+		A4249_RS11065	0.60	-0.7
2,227,123	+		A4249_RS11065	0.60	-0.1
2,227,123	+		A4249_RS11065	0.60	-0.4
2,227,123	+		A4249_RS11065	0.60	-0.8
2,227,123	+		A4249_RS11065	0.60	+0.5
2,227,124	-		A4249_RS11065	0.60	-0.8
2,227,124	-		A4249_RS11065	0.60	-0.3
2,227,124	-		A4249_RS11065	0.60	+0.2
2,227,124	-		A4249_RS11065	0.60	-0.0
2,227,237	+		A4249_RS11065	0.79	-0.4
2,227,237	+		A4249_RS11065	0.79	-2.1
2,227,238	-		A4249_RS11065	0.79	-1.3
2,227,238	-		A4249_RS11065	0.79	-0.9
2,227,478	-				-0.4
2,227,614	+				-0.2
2,227,614	+				-1.5
2,227,614	+				+0.1
2,227,615	-				-0.2
2,227,649	+		A4249_RS11070	0.12	-0.6
2,227,772	+		A4249_RS11070	0.21	-0.4
2,227,772	+		A4249_RS11070	0.21	+0.6
2,227,772	+		A4249_RS11070	0.21	+0.9
2,227,772	+		A4249_RS11070	0.21	+1.0
2,227,772	+		A4249_RS11070	0.21	+0.6
2,227,773	-		A4249_RS11070	0.21	-1.0
2,227,773	-		A4249_RS11070	0.21	+1.4
2,227,773	-		A4249_RS11070	0.21	-0.0
2,227,773	-		A4249_RS11070	0.21	-0.6
2,227,773	-		A4249_RS11070	0.21	-1.5
2,227,773	-		A4249_RS11070	0.21	+0.5
2,227,773	-		A4249_RS11070	0.21	+0.3
2,227,875	-		A4249_RS11070	0.29	-0.5
2,228,060	+		A4249_RS11070	0.42	+0.1
2,228,060	+		A4249_RS11070	0.42	+0.3
2,228,060	+		A4249_RS11070	0.42	-0.1
2,228,061	-		A4249_RS11070	0.42	+0.0
2,228,081	+		A4249_RS11070	0.44	+0.8
2,228,081	+		A4249_RS11070	0.44	+0.0
2,228,081	+		A4249_RS11070	0.44	-1.6
2,228,081	+		A4249_RS11070	0.44	-1.1
2,228,081	+		A4249_RS11070	0.44	-0.1
2,228,081	+		A4249_RS11070	0.44	-1.2
2,228,081	+		A4249_RS11070	0.44	-1.1
2,228,082	-		A4249_RS11070	0.44	+1.2
2,228,082	-		A4249_RS11070	0.44	+1.0
2,228,082	-		A4249_RS11070	0.44	+0.3
2,228,082	-		A4249_RS11070	0.44	+1.1
2,228,082	-		A4249_RS11070	0.44	+0.5
2,228,082	-		A4249_RS11070	0.44	+2.3
2,228,082	-		A4249_RS11070	0.44	+0.1
2,228,082	-		A4249_RS11070	0.44	+0.1
2,228,082	-		A4249_RS11070	0.44	-0.2
2,228,082	-		A4249_RS11070	0.44	-1.2
2,228,082	-		A4249_RS11070	0.44	+0.3
2,228,082	-		A4249_RS11070	0.44	-0.4
2,228,082	-		A4249_RS11070	0.44	+0.5
2,228,082	-		A4249_RS11070	0.44	-2.0
2,228,082	-		A4249_RS11070	0.44	-0.2
2,228,162	+		A4249_RS11070	0.50	-0.7
2,228,162	+		A4249_RS11070	0.50	+0.6
2,228,162	+		A4249_RS11070	0.50	+0.1
2,228,163	-		A4249_RS11070	0.50	-0.6
2,228,163	-		A4249_RS11070	0.50	+0.1
2,228,163	-		A4249_RS11070	0.50	-0.4
2,228,163	-		A4249_RS11070	0.50	+1.1
2,228,183	+		A4249_RS11070	0.52	-0.0
2,228,183	+		A4249_RS11070	0.52	+2.1
2,228,184	-		A4249_RS11070	0.52	-0.2
2,228,184	-		A4249_RS11070	0.52	-0.2
2,228,186	+		A4249_RS11070	0.52	+0.0
2,228,186	+		A4249_RS11070	0.52	-0.5
2,228,186	+		A4249_RS11070	0.52	+1.2
2,228,186	+		A4249_RS11070	0.52	+1.5
2,228,186	+		A4249_RS11070	0.52	+0.5
2,228,186	+		A4249_RS11070	0.52	+0.9
2,228,186	+		A4249_RS11070	0.52	+0.8
2,228,187	-		A4249_RS11070	0.52	-0.8
2,228,187	-		A4249_RS11070	0.52	-1.9
2,228,187	-		A4249_RS11070	0.52	-1.5
2,228,187	-		A4249_RS11070	0.52	+0.9