Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10875

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
2,184,392	+		A4249_RS10870	0.19	-0.4
2,184,392	+		A4249_RS10870	0.19	-0.5
2,184,392	+		A4249_RS10870	0.19	-0.4
2,184,392	+		A4249_RS10870	0.19	+0.4
2,184,392	+		A4249_RS10870	0.19	+0.7
2,184,393	-		A4249_RS10870	0.19	+0.6
2,184,393	-		A4249_RS10870	0.19	-0.3
2,184,393	-		A4249_RS10870	0.19	-0.7
2,184,393	-		A4249_RS10870	0.19	-0.2
2,184,394	+		A4249_RS10870	0.19	-0.5
2,184,394	+		A4249_RS10870	0.19	+0.3
2,184,394	+		A4249_RS10870	0.19	+1.2
2,184,394	+		A4249_RS10870	0.19	-0.6
2,184,395	-		A4249_RS10870	0.19	+0.4
2,184,395	-		A4249_RS10870	0.19	-0.2
2,184,395	-		A4249_RS10870	0.19	-0.1
2,184,395	-		A4249_RS10870	0.19	+1.1
2,184,395	-		A4249_RS10870	0.19	-0.4
2,184,395	-		A4249_RS10870	0.19	-0.3
2,184,395	-		A4249_RS10870	0.19	-0.9
2,184,432	+		A4249_RS10870	0.23	+0.6
2,184,432	+		A4249_RS10870	0.23	-0.2
2,184,433	-		A4249_RS10870	0.23	+0.6
2,184,573	+		A4249_RS10870	0.39	-0.5
2,184,708	+		A4249_RS10870	0.53	+0.6
2,184,709	-		A4249_RS10870	0.54	-0.4
2,184,813	+		A4249_RS10870	0.65	+0.0
2,184,813	+		A4249_RS10870	0.65	-0.8
2,184,813	+		A4249_RS10870	0.65	-0.9
2,184,813	+		A4249_RS10870	0.65	+0.1
2,184,813	+		A4249_RS10870	0.65	-0.4
2,184,813	+		A4249_RS10870	0.65	-0.7
2,184,813	+		A4249_RS10870	0.65	-1.0
2,184,813	+		A4249_RS10870	0.65	-0.2
2,184,814	-		A4249_RS10870	0.65	+0.2
2,184,814	-		A4249_RS10870	0.65	-0.3
2,184,814	-		A4249_RS10870	0.65	-1.2
2,184,814	-		A4249_RS10870	0.65	+0.8
2,184,814	-		A4249_RS10870	0.65	+0.5
2,184,814	-		A4249_RS10870	0.65	-0.7
2,184,814	-		A4249_RS10870	0.65	+1.5
2,184,814	-		A4249_RS10870	0.65	-0.8
2,185,143	-				+1.5
2,185,143	-				+0.5
2,185,152	-				+1.3
2,185,152	-				-0.4
2,185,175	+				-1.1
2,185,209	+				-1.7
2,185,210	-				+0.4
2,185,210	-				+1.3
2,185,223	+				+0.2
2,185,223	+				+1.2
2,185,223	+				-0.3
2,185,224	-				-1.1
2,185,260	+				-0.2
2,185,261	-				-0.3
2,185,261	-				-2.0
2,185,511	+				+0.1
2,185,512	-				-0.1
2,185,732	-		A4249_RS10875	0.20	-0.1
2,185,827	+		A4249_RS10875	0.24	+0.4
2,185,827	+		A4249_RS10875	0.24	-0.3
2,185,827	+		A4249_RS10875	0.24	+0.8
2,185,827	+		A4249_RS10875	0.24	+0.2
2,185,827	+		A4249_RS10875	0.24	-0.1
2,185,828	-		A4249_RS10875	0.25	-1.9
2,185,828	-		A4249_RS10875	0.25	+0.2
2,185,828	-		A4249_RS10875	0.25	-0.7
2,185,828	-		A4249_RS10875	0.25	-0.2
2,185,828	-		A4249_RS10875	0.25	-1.2
2,185,828	-		A4249_RS10875	0.25	-0.2
2,185,828	-		A4249_RS10875	0.25	+0.5
2,185,828	-		A4249_RS10875	0.25	-0.8
2,185,828	-		A4249_RS10875	0.25	+0.1
2,185,828	-		A4249_RS10875	0.25	-0.8
2,185,828	-		A4249_RS10875	0.25	-2.5
2,185,828	-		A4249_RS10875	0.25	-0.2
2,185,828	-		A4249_RS10875	0.25	-0.5
2,185,828	-		A4249_RS10875	0.25	-0.6
2,185,839	+		A4249_RS10875	0.25	-0.8
2,185,840	-		A4249_RS10875	0.25	+0.4
2,185,840	-		A4249_RS10875	0.25	+0.2
2,185,840	-		A4249_RS10875	0.25	-0.6
2,185,840	-		A4249_RS10875	0.25	-0.0
2,185,974	+		A4249_RS10875	0.32	+0.0
2,186,019	+		A4249_RS10875	0.34	-0.4
2,186,019	+		A4249_RS10875	0.34	-1.4
2,186,019	+		A4249_RS10875	0.34	-0.4
2,186,019	+		A4249_RS10875	0.34	+0.1
2,186,019	+		A4249_RS10875	0.34	-0.6
2,186,019	+		A4249_RS10875	0.34	+0.0
2,186,020	-		A4249_RS10875	0.34	-0.0
2,186,020	-		A4249_RS10875	0.34	+0.3
2,186,020	-		A4249_RS10875	0.34	-0.5
2,186,020	-		A4249_RS10875	0.34	+0.6
2,186,020	-		A4249_RS10875	0.34	+0.4
2,186,065	-		A4249_RS10875	0.36	-1.0
2,186,079	+		A4249_RS10875	0.37	-0.2
2,186,079	+		A4249_RS10875	0.37	-0.9
2,186,079	+		A4249_RS10875	0.37	-1.7
2,186,079	+		A4249_RS10875	0.37	+0.2
2,186,080	-		A4249_RS10875	0.37	-0.9
2,186,080	-		A4249_RS10875	0.37	-0.5
2,186,080	-		A4249_RS10875	0.37	-0.2
2,186,080	-		A4249_RS10875	0.37	-1.2
2,186,130	+		A4249_RS10875	0.39	-0.1
2,186,131	-		A4249_RS10875	0.39	-0.4
2,186,131	-		A4249_RS10875	0.39	+0.3
2,186,264	-		A4249_RS10875	0.46	+0.2
2,186,391	+		A4249_RS10875	0.52	-0.4
2,186,391	+		A4249_RS10875	0.52	+1.3
2,186,391	+		A4249_RS10875	0.52	-0.1
2,186,391	+		A4249_RS10875	0.52	+0.4
2,186,392	-		A4249_RS10875	0.52	+0.6
2,186,392	-		A4249_RS10875	0.52	+0.5
2,186,396	+		A4249_RS10875	0.52	-0.5
2,186,396	+		A4249_RS10875	0.52	-0.7
2,186,396	+		A4249_RS10875	0.52	-0.4
2,186,396	+		A4249_RS10875	0.52	-1.1
2,186,396	+		A4249_RS10875	0.52	-0.2
2,186,396	+		A4249_RS10875	0.52	-0.1
2,186,396	+		A4249_RS10875	0.52	+0.1
2,186,396	+		A4249_RS10875	0.52	+0.3
2,186,396	+		A4249_RS10875	0.52	+0.2
2,186,396	+		A4249_RS10875	0.52	+0.3
2,186,396	+		A4249_RS10875	0.52	-0.4
2,186,396	+		A4249_RS10875	0.52	-0.2
2,186,396	+		A4249_RS10875	0.52	-1.6
2,186,396	+		A4249_RS10875	0.52	-0.3
2,186,396	+		A4249_RS10875	0.52	+0.4
2,186,396	+		A4249_RS10875	0.52	+0.4
2,186,396	+		A4249_RS10875	0.52	+0.1
2,186,396	+		A4249_RS10875	0.52	+0.0
2,186,396	+		A4249_RS10875	0.52	+0.6
2,186,397	-		A4249_RS10875	0.52	+0.4
2,186,397	-		A4249_RS10875	0.52	+0.0
2,186,397	-		A4249_RS10875	0.52	+0.3
2,186,397	-		A4249_RS10875	0.52	-0.2
2,186,397	-		A4249_RS10875	0.52	+0.4
2,186,397	-		A4249_RS10875	0.52	+0.1
2,186,397	-		A4249_RS10875	0.52	-2.0
2,186,397	-		A4249_RS10875	0.52	-0.4
2,186,794	-		A4249_RS10875	0.71	-0.5
2,187,159	+		A4249_RS10875	0.89	-0.2
2,187,159	+		A4249_RS10875	0.89	-0.6
2,187,159	+		A4249_RS10875	0.89	-0.7
2,187,160	-		A4249_RS10875	0.89	-0.8
2,187,198	+				+0.4
2,187,199	-				-0.4
2,187,199	-				-0.3
2,187,199	-				+0.4
2,187,199	-				-0.5
2,187,219	+				-1.2
2,187,219	+				-1.2
2,187,219	+				+0.0
2,187,219	+				-0.1
2,187,219	+				-0.9
2,187,219	+				-0.5
2,187,219	+				-0.7
2,187,219	+				-0.3
2,187,220	-				-0.1
2,187,220	-				+0.5
2,187,220	-				-0.6
2,187,220	-				+0.2
2,187,220	-				-1.4
2,187,294	+				+1.4
2,187,294	+				+0.3
2,187,295	-				-0.6
2,187,737	+		A4249_RS10880	0.14	+0.2
2,187,737	+		A4249_RS10880	0.14	+0.2
2,187,737	+		A4249_RS10880	0.14	+0.7
2,187,737	+		A4249_RS10880	0.14	+1.3
2,187,737	+		A4249_RS10880	0.14	+2.1
2,187,738	-		A4249_RS10880	0.14	+0.8
2,187,738	-		A4249_RS10880	0.14	-0.2
2,187,738	-		A4249_RS10880	0.14	-1.3
2,187,738	-		A4249_RS10880	0.14	-0.1
2,187,738	-		A4249_RS10880	0.14	+0.4
2,187,866	+		A4249_RS10880	0.21	-1.0
2,187,867	-		A4249_RS10880	0.21	+2.0
2,187,867	-		A4249_RS10880	0.21	+1.1
2,187,867	-		A4249_RS10880	0.21	-0.2
2,187,867	-		A4249_RS10880	0.21	-0.6
2,187,867	-		A4249_RS10880	0.21	-0.2
2,187,867	-		A4249_RS10880	0.21	-0.1
2,188,213	-		A4249_RS10880	0.39	-0.4
2,188,349	+		A4249_RS10880	0.46	-1.1
2,188,350	-		A4249_RS10880	0.46	-0.8