Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10090

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
2,025,719	-				-0.5
2,025,994	+		A4249_RS10085	0.31	+1.1
2,025,994	+		A4249_RS10085	0.31	-0.2
2,025,994	+		A4249_RS10085	0.31	-0.6
2,025,994	+		A4249_RS10085	0.31	-1.3
2,025,994	+		A4249_RS10085	0.31	+0.2
2,025,994	+		A4249_RS10085	0.31	+1.1
2,025,994	+		A4249_RS10085	0.31	+2.7
2,025,994	+		A4249_RS10085	0.31	-0.8
2,025,995	-		A4249_RS10085	0.32	-0.1
2,025,995	-		A4249_RS10085	0.32	-0.3
2,025,995	-		A4249_RS10085	0.32	+1.5
2,025,995	-		A4249_RS10085	0.32	-0.2
2,025,995	-		A4249_RS10085	0.32	+0.3
2,025,995	-		A4249_RS10085	0.32	-0.6
2,025,995	-		A4249_RS10085	0.32	-0.5
2,026,396	+		A4249_RS10085	0.75	-0.2
2,026,435	+		A4249_RS10085	0.79	-0.2
2,026,435	+		A4249_RS10085	0.79	-0.4
2,026,559	-				+0.8
2,026,559	-				+2.3
2,026,612	+				+0.8
2,026,612	+				-0.1
2,026,613	-				+0.6
2,026,613	-				-0.5
2,026,613	-				-0.4
2,026,613	-				+0.1
2,026,672	+				+0.1
2,026,672	+				-0.4
2,026,673	-				+1.1
2,026,673	-				+0.1
2,026,673	-				-0.1
2,026,673	-				+0.0
2,026,673	-				-0.3
2,026,712	+				-0.1
2,026,712	+				-0.5
2,026,713	-				-0.6
2,026,713	-				-0.0
2,026,713	-				-0.0
2,026,713	-				+0.3
2,026,713	-				+0.1
2,026,743	+				-0.8
2,026,744	-				+0.7
2,026,744	-				-0.3
2,026,744	-				+0.2
2,026,744	-				-0.5
2,026,744	-				+0.2
2,026,744	-				-1.3
2,026,744	-				+0.2
2,026,847	+				+0.4
2,026,847	+				+0.1
2,026,847	+				-0.1
2,026,847	+				+0.3
2,026,848	-				+1.3
2,026,848	-				+0.3
2,026,848	-				+0.6
2,026,852	+				-0.5
2,026,852	+				+0.5
2,026,852	+				+0.9
2,026,852	+				-0.8
2,026,852	+				+0.4
2,026,852	+				-0.1
2,026,852	+				-0.4
2,026,852	+				+0.9
2,026,853	-				-0.6
2,026,853	-				-0.3
2,026,853	-				+0.2
2,026,853	-				-0.9
2,026,853	-				-0.2
2,026,853	-				+0.3
2,026,853	-				+0.9
2,026,853	-				+0.7
2,026,853	-				-1.0
2,026,853	-				-0.4
2,026,931	+				+0.1
2,026,932	-				-0.3
2,026,932	-				-1.0
2,026,932	-				-0.5
2,027,979	+		A4249_RS10090	0.34	-0.0
2,027,980	-		A4249_RS10090	0.34	+0.4
2,027,980	-		A4249_RS10090	0.34	-1.0
2,027,980	-		A4249_RS10090	0.34	-0.2
2,027,998	+		A4249_RS10090	0.35	-0.5
2,027,998	+		A4249_RS10090	0.35	+0.5
2,027,998	+		A4249_RS10090	0.35	+0.6
2,027,998	+		A4249_RS10090	0.35	+0.7
2,027,999	-		A4249_RS10090	0.35	-0.3
2,027,999	-		A4249_RS10090	0.35	-0.7
2,028,238	+		A4249_RS10090	0.41	-1.4
2,028,238	+		A4249_RS10090	0.41	-0.3
2,028,238	+		A4249_RS10090	0.41	+0.5
2,028,238	+		A4249_RS10090	0.41	-1.6
2,028,239	-		A4249_RS10090	0.41	-0.2
2,028,239	-		A4249_RS10090	0.41	-0.9
2,028,472	+		A4249_RS10090	0.47	-0.8
2,028,472	+		A4249_RS10090	0.47	-1.6
2,028,472	+		A4249_RS10090	0.47	+0.3
2,028,472	+		A4249_RS10090	0.47	-0.3
2,028,472	+		A4249_RS10090	0.47	+0.4
2,028,472	+		A4249_RS10090	0.47	-1.7
2,028,473	-		A4249_RS10090	0.47	-0.9
2,028,473	-		A4249_RS10090	0.47	+0.1
2,028,473	-		A4249_RS10090	0.47	-1.0
2,028,473	-		A4249_RS10090	0.47	-0.2
2,028,473	-		A4249_RS10090	0.47	-0.9
2,028,508	+		A4249_RS10090	0.48	+0.4
2,028,508	+		A4249_RS10090	0.48	-0.0
2,028,508	+		A4249_RS10090	0.48	+1.3
2,028,509	-		A4249_RS10090	0.48	-0.1
2,028,509	-		A4249_RS10090	0.48	-0.3
2,028,767	+		A4249_RS10090	0.55	-0.1
2,028,768	-		A4249_RS10090	0.55	-0.2
2,028,768	-		A4249_RS10090	0.55	+1.3
2,028,777	+		A4249_RS10090	0.56	-0.5
2,028,777	+		A4249_RS10090	0.56	+0.4
2,028,778	-		A4249_RS10090	0.56	-0.8
2,028,850	+		A4249_RS10090	0.58	-0.1
2,028,851	-		A4249_RS10090	0.58	+1.2
2,028,851	-		A4249_RS10090	0.58	-0.4
2,028,851	-		A4249_RS10090	0.58	-0.2
2,028,853	+		A4249_RS10090	0.58	+0.3
2,028,853	+		A4249_RS10090	0.58	-1.0
2,028,853	+		A4249_RS10090	0.58	+1.1
2,028,853	+		A4249_RS10090	0.58	+0.1
2,028,854	-		A4249_RS10090	0.58	-0.5
2,028,896	-		A4249_RS10090	0.59	-0.6
2,028,896	-		A4249_RS10090	0.59	-0.2
2,028,896	-		A4249_RS10090	0.59	+0.6
2,028,896	-		A4249_RS10090	0.59	-1.6
2,028,974	-		A4249_RS10090	0.61	+0.3
2,029,064	-		A4249_RS10090	0.63	-0.2
2,029,064	-		A4249_RS10090	0.63	+0.1
2,029,064	-		A4249_RS10090	0.63	+0.7
2,029,084	+		A4249_RS10090	0.64	+0.9
2,029,084	+		A4249_RS10090	0.64	+0.0
2,029,084	+		A4249_RS10090	0.64	-0.7
2,029,084	+		A4249_RS10090	0.64	+2.2
2,029,084	+		A4249_RS10090	0.64	+1.4
2,029,085	-		A4249_RS10090	0.64	-0.7
2,029,085	-		A4249_RS10090	0.64	-0.2
2,029,085	-		A4249_RS10090	0.64	+0.1
2,029,085	-		A4249_RS10090	0.64	+0.9
2,029,252	+		A4249_RS10090	0.68	+0.2
2,029,252	+		A4249_RS10090	0.68	-1.1
2,029,253	-		A4249_RS10090	0.69	-2.7
2,029,393	+		A4249_RS10090	0.72	-0.5
2,029,393	+		A4249_RS10090	0.72	-0.4
2,029,472	-		A4249_RS10090	0.74	-0.7
2,029,504	+		A4249_RS10090	0.75	+0.6
2,029,504	+		A4249_RS10090	0.75	+0.8
2,029,504	+		A4249_RS10090	0.75	+0.4
2,029,504	+		A4249_RS10090	0.75	-1.1
2,029,505	-		A4249_RS10090	0.75	+1.7
2,029,505	-		A4249_RS10090	0.75	+0.2
2,029,927	+		A4249_RS10090	0.87	-2.2
2,029,927	+		A4249_RS10090	0.87	+0.7
2,029,927	+		A4249_RS10090	0.87	+0.7
2,029,927	+		A4249_RS10090	0.87	-0.2
2,029,927	+		A4249_RS10090	0.87	-0.2
2,029,927	+		A4249_RS10090	0.87	+0.3
2,029,927	+		A4249_RS10090	0.87	-0.2
2,029,927	+		A4249_RS10090	0.87	+0.3
2,029,927	+		A4249_RS10090	0.87	+0.5
2,029,927	+		A4249_RS10090	0.87	+0.6
2,029,927	+		A4249_RS10090	0.87	+0.4
2,029,927	+		A4249_RS10090	0.87	+0.6
2,029,927	+		A4249_RS10090	0.87	+1.2
2,029,928	-		A4249_RS10090	0.87	-0.2
2,029,928	-		A4249_RS10090	0.87	-0.5
2,029,928	-		A4249_RS10090	0.87	-1.1
2,029,928	-		A4249_RS10090	0.87	-0.4
2,029,928	-		A4249_RS10090	0.87	-1.4
2,029,928	-		A4249_RS10090	0.87	+1.3
2,029,928	-		A4249_RS10090	0.87	+1.3
2,029,928	-		A4249_RS10090	0.87	-1.1
2,029,928	-		A4249_RS10090	0.87	-1.4
2,029,928	-		A4249_RS10090	0.87	+0.0
2,029,928	-		A4249_RS10090	0.87	-1.0
2,029,928	-		A4249_RS10090	0.87	-1.2
2,029,928	-		A4249_RS10090	0.87	-0.6
2,029,928	-		A4249_RS10090	0.87	-0.5
2,030,116	+				+0.5
2,030,122	+				-0.1
2,030,122	+				+0.9
2,030,122	+				+1.5
2,030,122	+				-0.6
2,030,123	-				-2.0
2,030,123	-				+0.4
2,030,123	-				-0.4
2,030,123	-				+0.1
2,030,123	-				-0.2
2,030,123	-				-0.3
2,030,123	-				-2.8
2,030,123	-				-1.6
2,030,123	-				+0.5
2,030,123	-				+1.4
2,030,123	-				-0.5
2,030,162	+				+0.5
2,030,163	-				+0.7
2,030,196	+				+0.1
2,030,196	+				+0.5
2,030,196	+				-0.4
2,030,196	+				-0.6
2,030,197	-				+0.1
2,030,197	-				-0.6
2,030,423	+				-0.4
2,030,423	+				+0.6
2,030,423	+				-1.2
2,030,424	-				+0.6
2,030,424	-				-0.8
2,030,558	+		A4249_RS10095	0.29	-0.6
2,030,559	-		A4249_RS10095	0.29	+0.6
2,030,858	+				-0.5
2,030,951	-				+2.0
2,031,115	+		A4249_RS10100	0.32	+1.5
2,031,115	+		A4249_RS10100	0.32	-0.6
2,031,115	+		A4249_RS10100	0.32	+1.4
2,031,115	+		A4249_RS10100	0.32	-1.2
2,031,115	+		A4249_RS10100	0.32	+0.3
2,031,116	-		A4249_RS10100	0.32	+1.7
2,031,116	-		A4249_RS10100	0.32	-0.2
2,031,116	-		A4249_RS10100	0.32	-0.1
2,031,193	-		A4249_RS10100	0.44	-2.1
2,031,193	-		A4249_RS10100	0.44	-0.7
2,031,259	-		A4249_RS10100	0.54	-0.8
2,031,308	+		A4249_RS10100	0.62	-1.7