Experiment: Cytidine 0.41115 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10075 and A4249_RS10080 are separated by 75 nucleotides A4249_RS10080 and A4249_RS10085 are separated by 46 nucleotides
A4249_RS10075: A4249_RS10075 - adenylosuccinate synthase, at 2,023,124 to 2,024,419
_RS10075
A4249_RS10080: A4249_RS10080 - phosphoserine transaminase, at 2,024,495 to 2,025,655
_RS10080
A4249_RS10085: A4249_RS10085 - DnaJ C-terminal domain-containing protein, at 2,025,702 to 2,026,628
_RS10085
Position (kb)
2024
2025
2026 Strain fitness (log2 ratio)
-1
0
1
2 at 2024.496 kb on + strand at 2024.497 kb on - strand at 2024.497 kb on - strand at 2025.716 kb on + strand at 2025.716 kb on + strand at 2025.716 kb on + strand at 2025.716 kb on + strand at 2025.716 kb on + strand at 2025.716 kb on + strand at 2025.717 kb on - strand at 2025.717 kb on - strand at 2025.717 kb on - strand at 2025.717 kb on - strand at 2025.717 kb on - strand at 2025.717 kb on - strand at 2025.717 kb on - strand at 2025.718 kb on + strand at 2025.719 kb on - strand at 2025.994 kb on + strand, within A4249_RS10085 at 2025.994 kb on + strand, within A4249_RS10085 at 2025.994 kb on + strand, within A4249_RS10085 at 2025.994 kb on + strand, within A4249_RS10085 at 2025.994 kb on + strand, within A4249_RS10085 at 2025.994 kb on + strand, within A4249_RS10085 at 2025.994 kb on + strand, within A4249_RS10085 at 2025.994 kb on + strand, within A4249_RS10085 at 2025.995 kb on - strand, within A4249_RS10085 at 2025.995 kb on - strand, within A4249_RS10085 at 2025.995 kb on - strand, within A4249_RS10085 at 2025.995 kb on - strand, within A4249_RS10085 at 2025.995 kb on - strand, within A4249_RS10085 at 2025.995 kb on - strand, within A4249_RS10085 at 2025.995 kb on - strand, within A4249_RS10085 at 2026.396 kb on + strand, within A4249_RS10085 at 2026.435 kb on + strand, within A4249_RS10085 at 2026.435 kb on + strand, within A4249_RS10085 at 2026.559 kb on - strand at 2026.559 kb on - strand at 2026.612 kb on + strand at 2026.612 kb on + strand at 2026.613 kb on - strand at 2026.613 kb on - strand at 2026.613 kb on - strand at 2026.613 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cytidine 0.41115 mM (C) remove 2,024,496 + -0.6 2,024,497 - +0.5 2,024,497 - +0.0 2,025,716 + +1.5 2,025,716 + +0.4 2,025,716 + +1.2 2,025,716 + -0.5 2,025,716 + -0.4 2,025,716 + +0.7 2,025,717 - -0.4 2,025,717 - -0.5 2,025,717 - -0.8 2,025,717 - -0.5 2,025,717 - -1.2 2,025,717 - -0.1 2,025,717 - +1.9 2,025,718 + -1.0 2,025,719 - -0.5 2,025,994 + A4249_RS10085 0.31 +1.1 2,025,994 + A4249_RS10085 0.31 -0.2 2,025,994 + A4249_RS10085 0.31 -0.6 2,025,994 + A4249_RS10085 0.31 -1.3 2,025,994 + A4249_RS10085 0.31 +0.2 2,025,994 + A4249_RS10085 0.31 +1.1 2,025,994 + A4249_RS10085 0.31 +2.7 2,025,994 + A4249_RS10085 0.31 -0.8 2,025,995 - A4249_RS10085 0.32 -0.1 2,025,995 - A4249_RS10085 0.32 -0.3 2,025,995 - A4249_RS10085 0.32 +1.5 2,025,995 - A4249_RS10085 0.32 -0.2 2,025,995 - A4249_RS10085 0.32 +0.3 2,025,995 - A4249_RS10085 0.32 -0.6 2,025,995 - A4249_RS10085 0.32 -0.5 2,026,396 + A4249_RS10085 0.75 -0.2 2,026,435 + A4249_RS10085 0.79 -0.2 2,026,435 + A4249_RS10085 0.79 -0.4 2,026,559 - +0.8 2,026,559 - +2.3 2,026,612 + +0.8 2,026,612 + -0.1 2,026,613 - +0.6 2,026,613 - -0.5 2,026,613 - -0.4 2,026,613 - +0.1
Or see this region's nucleotide sequence