Experiment: Cytidine 0.41115 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10010 and A4249_RS10015 overlap by 1 nucleotides A4249_RS10015 and A4249_RS10020 are separated by 1 nucleotides
A4249_RS10010: A4249_RS10010 - 2-isopropylmalate synthase, at 2,009,203 to 2,010,453
_RS10010
A4249_RS10015: A4249_RS10015 - ACT domain-containing protein, at 2,010,453 to 2,010,704
_RS10015
A4249_RS10020: A4249_RS10020 - acetolactate synthase 2 catalytic subunit, at 2,010,706 to 2,012,418
_RS10020
Position (kb)
2010
2011 Strain fitness (log2 ratio)
-2
-1
0
1 at 2009.453 kb on + strand, within A4249_RS10010 at 2009.453 kb on + strand, within A4249_RS10010 at 2009.453 kb on + strand, within A4249_RS10010 at 2009.453 kb on + strand, within A4249_RS10010 at 2009.454 kb on - strand, within A4249_RS10010 at 2009.454 kb on - strand, within A4249_RS10010 at 2009.454 kb on - strand, within A4249_RS10010 at 2009.454 kb on - strand, within A4249_RS10010 at 2009.454 kb on - strand, within A4249_RS10010 at 2009.454 kb on - strand, within A4249_RS10010 at 2009.454 kb on - strand, within A4249_RS10010 at 2009.454 kb on - strand, within A4249_RS10010 at 2009.621 kb on + strand, within A4249_RS10010 at 2010.005 kb on + strand, within A4249_RS10010 at 2010.005 kb on + strand, within A4249_RS10010 at 2010.005 kb on + strand, within A4249_RS10010 at 2010.418 kb on + strand at 2010.427 kb on + strand at 2010.434 kb on - strand at 2010.434 kb on - strand at 2010.447 kb on + strand at 2010.932 kb on + strand, within A4249_RS10020 at 2010.932 kb on + strand, within A4249_RS10020 at 2010.932 kb on + strand, within A4249_RS10020 at 2010.933 kb on - strand, within A4249_RS10020 at 2010.933 kb on - strand, within A4249_RS10020 at 2011.292 kb on + strand, within A4249_RS10020 at 2011.292 kb on + strand, within A4249_RS10020 at 2011.292 kb on + strand, within A4249_RS10020 at 2011.292 kb on + strand, within A4249_RS10020 at 2011.292 kb on + strand, within A4249_RS10020 at 2011.293 kb on - strand, within A4249_RS10020 at 2011.293 kb on - strand, within A4249_RS10020 at 2011.293 kb on - strand, within A4249_RS10020 at 2011.293 kb on - strand, within A4249_RS10020 at 2011.293 kb on - strand, within A4249_RS10020 at 2011.293 kb on - strand, within A4249_RS10020 at 2011.293 kb on - strand, within A4249_RS10020 at 2011.293 kb on - strand, within A4249_RS10020
Per-strain Table
Position Strand Gene LocusTag Fraction Cytidine 0.41115 mM (C) remove 2,009,453 + A4249_RS10010 0.20 -0.8 2,009,453 + A4249_RS10010 0.20 -0.5 2,009,453 + A4249_RS10010 0.20 +0.4 2,009,453 + A4249_RS10010 0.20 -1.0 2,009,454 - A4249_RS10010 0.20 -1.8 2,009,454 - A4249_RS10010 0.20 -0.3 2,009,454 - A4249_RS10010 0.20 -0.1 2,009,454 - A4249_RS10010 0.20 -0.0 2,009,454 - A4249_RS10010 0.20 -0.1 2,009,454 - A4249_RS10010 0.20 -0.5 2,009,454 - A4249_RS10010 0.20 +0.5 2,009,454 - A4249_RS10010 0.20 -0.4 2,009,621 + A4249_RS10010 0.33 -0.6 2,010,005 + A4249_RS10010 0.64 -0.3 2,010,005 + A4249_RS10010 0.64 -0.9 2,010,005 + A4249_RS10010 0.64 -0.6 2,010,418 + -0.8 2,010,427 + +0.1 2,010,434 - +1.1 2,010,434 - +0.9 2,010,447 + -1.2 2,010,932 + A4249_RS10020 0.13 -0.4 2,010,932 + A4249_RS10020 0.13 -1.3 2,010,932 + A4249_RS10020 0.13 -1.0 2,010,933 - A4249_RS10020 0.13 +0.2 2,010,933 - A4249_RS10020 0.13 -0.6 2,011,292 + A4249_RS10020 0.34 -0.4 2,011,292 + A4249_RS10020 0.34 -0.4 2,011,292 + A4249_RS10020 0.34 -0.7 2,011,292 + A4249_RS10020 0.34 -0.1 2,011,292 + A4249_RS10020 0.34 +0.3 2,011,293 - A4249_RS10020 0.34 +0.6 2,011,293 - A4249_RS10020 0.34 +0.1 2,011,293 - A4249_RS10020 0.34 -0.3 2,011,293 - A4249_RS10020 0.34 -1.6 2,011,293 - A4249_RS10020 0.34 -0.3 2,011,293 - A4249_RS10020 0.34 -1.2 2,011,293 - A4249_RS10020 0.34 +0.8 2,011,293 - A4249_RS10020 0.34 -0.3
Or see this region's nucleotide sequence