Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10000

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
2,006,515	+		A4249_RS09995	0.36	-2.1
2,006,556	+		A4249_RS09995	0.40	+0.5
2,006,737	+		A4249_RS09995	0.56	-1.0
2,006,737	+		A4249_RS09995	0.56	-0.0
2,006,737	+		A4249_RS09995	0.56	-0.9
2,006,737	+		A4249_RS09995	0.56	-0.3
2,006,737	+		A4249_RS09995	0.56	+1.4
2,006,738	-		A4249_RS09995	0.56	+0.1
2,006,738	-		A4249_RS09995	0.56	-2.1
2,006,738	-		A4249_RS09995	0.56	-0.3
2,006,788	+		A4249_RS09995	0.61	-0.5
2,006,788	+		A4249_RS09995	0.61	-0.4
2,006,789	-		A4249_RS09995	0.61	-1.0
2,007,109	+		A4249_RS09995	0.90	+1.6
2,007,109	+		A4249_RS09995	0.90	-1.7
2,007,109	+		A4249_RS09995	0.90	+0.3
2,007,109	+		A4249_RS09995	0.90	-0.2
2,007,109	+		A4249_RS09995	0.90	+0.1
2,007,109	+		A4249_RS09995	0.90	+1.2
2,007,109	+		A4249_RS09995	0.90	-0.1
2,007,109	+		A4249_RS09995	0.90	-1.3
2,007,109	+		A4249_RS09995	0.90	-0.8
2,007,109	+		A4249_RS09995	0.90	+0.1
2,007,109	+		A4249_RS09995	0.90	+0.8
2,007,109	+		A4249_RS09995	0.90	+0.2
2,007,109	+		A4249_RS09995	0.90	+1.3
2,007,110	-		A4249_RS09995	0.90	+0.3
2,007,110	-		A4249_RS09995	0.90	+1.2
2,007,110	-		A4249_RS09995	0.90	+0.5
2,007,110	-		A4249_RS09995	0.90	-0.4
2,007,110	-		A4249_RS09995	0.90	-1.3
2,007,110	-		A4249_RS09995	0.90	-0.7
2,007,110	-		A4249_RS09995	0.90	-0.4
2,007,110	-		A4249_RS09995	0.90	-0.1
2,007,110	-		A4249_RS09995	0.90	-0.3
2,007,110	-		A4249_RS09995	0.90	-1.0
2,007,110	-		A4249_RS09995	0.90	-0.5
2,007,110	-		A4249_RS09995	0.90	+1.2
2,007,110	-		A4249_RS09995	0.90	-0.1
2,007,110	-		A4249_RS09995	0.90	-0.8
2,007,110	-		A4249_RS09995	0.90	-0.6
2,007,110	-		A4249_RS09995	0.90	+0.7
2,007,110	-		A4249_RS09995	0.90	-1.0
2,007,110	-		A4249_RS09995	0.90	-0.6
2,007,110	-		A4249_RS09995	0.90	-0.2
2,007,196	+				-1.0
2,007,196	+				+0.5
2,007,196	+				+1.8
2,007,196	+				+1.8
2,007,196	+				+1.2
2,007,196	+				-0.3
2,007,197	-				+1.1
2,007,197	-				-1.1
2,007,197	-				-0.0
2,007,197	-				-2.2
2,007,224	+				-0.6
2,007,224	+				-1.1
2,007,224	+				-1.7
2,007,224	+				+0.7
2,007,224	+				-2.0
2,007,224	+				+0.4
2,007,224	+				+0.3
2,007,224	+				-0.1
2,007,224	+				-0.2
2,007,224	+				+2.1
2,007,224	+				-1.0
2,007,224	+				+1.2
2,007,225	-				-1.1
2,007,225	-				-0.8
2,007,225	-				-0.4
2,007,225	-				+1.1
2,007,225	-				-0.1
2,007,225	-				-0.8
2,007,225	-				-1.9
2,007,246	+				-0.6
2,007,246	+				-0.8
2,007,246	+				-1.5
2,007,246	+				+0.5
2,007,246	+				+0.4
2,007,247	-				-0.1
2,007,247	-				+1.1
2,007,247	-				+0.3
2,007,482	-		A4249_RS10000	0.45	-0.7
2,007,526	-		A4249_RS10000	0.52	-1.9
2,007,660	+		A4249_RS10000	0.75	-0.6
2,007,672	+		A4249_RS10000	0.77	-0.4
2,007,672	+		A4249_RS10000	0.77	+1.1
2,007,672	+		A4249_RS10000	0.77	-0.0
2,007,672	+		A4249_RS10000	0.77	-1.4
2,007,672	+		A4249_RS10000	0.77	-1.8
2,007,672	+		A4249_RS10000	0.77	-0.5
2,007,673	-		A4249_RS10000	0.77	+0.1
2,007,673	-		A4249_RS10000	0.77	-1.1
2,007,673	-		A4249_RS10000	0.77	+0.5
2,007,673	-		A4249_RS10000	0.77	-0.3
2,007,673	-		A4249_RS10000	0.77	-1.6
2,007,673	-		A4249_RS10000	0.77	-0.6
2,007,673	-		A4249_RS10000	0.77	-0.9
2,007,673	-		A4249_RS10000	0.77	+0.5
2,007,673	-		A4249_RS10000	0.77	+0.6
2,007,673	-		A4249_RS10000	0.77	-0.1
2,007,673	-		A4249_RS10000	0.77	-0.6
2,007,673	-		A4249_RS10000	0.77	-2.5
2,008,007	+		A4249_RS10005	0.15	+1.1
2,008,007	+		A4249_RS10005	0.15	-1.1
2,008,007	+		A4249_RS10005	0.15	+0.1
2,008,008	-		A4249_RS10005	0.15	-0.4
2,008,008	-		A4249_RS10005	0.15	-1.3
2,008,241	+		A4249_RS10005	0.31	-0.0
2,008,241	+		A4249_RS10005	0.31	-1.1
2,008,241	+		A4249_RS10005	0.31	-0.3
2,008,242	-		A4249_RS10005	0.31	-0.9
2,008,242	-		A4249_RS10005	0.31	-0.6
2,008,242	-		A4249_RS10005	0.31	-0.5
2,008,242	-		A4249_RS10005	0.31	-1.6
2,008,242	-		A4249_RS10005	0.31	-0.9
2,008,243	+		A4249_RS10005	0.31	-1.5
2,008,243	+		A4249_RS10005	0.31	-0.8
2,008,243	+		A4249_RS10005	0.31	-0.7
2,008,243	+		A4249_RS10005	0.31	+0.9
2,008,243	+		A4249_RS10005	0.31	+0.3
2,008,243	+		A4249_RS10005	0.31	-0.6
2,008,243	+		A4249_RS10005	0.31	-1.4
2,008,243	+		A4249_RS10005	0.31	+0.8
2,008,243	+		A4249_RS10005	0.31	-1.0
2,008,244	-		A4249_RS10005	0.32	+0.1
2,008,244	-		A4249_RS10005	0.32	-0.1
2,008,244	-		A4249_RS10005	0.32	-0.6
2,008,244	-		A4249_RS10005	0.32	-0.5
2,008,244	-		A4249_RS10005	0.32	-1.2
2,008,244	-		A4249_RS10005	0.32	-1.8
2,008,244	-		A4249_RS10005	0.32	-0.8
2,008,244	-		A4249_RS10005	0.32	-2.1
2,008,244	-		A4249_RS10005	0.32	+0.1
2,008,244	-		A4249_RS10005	0.32	-0.3
2,008,244	-		A4249_RS10005	0.32	-0.2
2,008,432	+		A4249_RS10005	0.45	-1.2
2,008,432	+		A4249_RS10005	0.45	-0.5
2,008,433	-		A4249_RS10005	0.45	-0.5
2,008,433	-		A4249_RS10005	0.45	-0.6
2,008,518	+		A4249_RS10005	0.51	-0.1
2,008,518	+		A4249_RS10005	0.51	-0.4
2,008,518	+		A4249_RS10005	0.51	-0.4
2,008,518	+		A4249_RS10005	0.51	-0.3
2,008,518	+		A4249_RS10005	0.51	-0.9
2,008,518	+		A4249_RS10005	0.51	+0.0
2,008,518	+		A4249_RS10005	0.51	+0.4
2,008,518	+		A4249_RS10005	0.51	+0.5
2,008,519	-		A4249_RS10005	0.51	-1.2
2,008,519	-		A4249_RS10005	0.51	-1.4
2,008,519	-		A4249_RS10005	0.51	+0.9
2,008,519	-		A4249_RS10005	0.51	-2.6
2,008,582	+		A4249_RS10005	0.55	+0.2
2,008,583	-		A4249_RS10005	0.56	-0.0
2,008,583	-		A4249_RS10005	0.56	-1.2
2,008,583	-		A4249_RS10005	0.56	+0.4
2,008,583	-		A4249_RS10005	0.56	-2.0
2,008,594	+		A4249_RS10005	0.56	-1.1
2,008,594	+		A4249_RS10005	0.56	-0.7
2,008,594	+		A4249_RS10005	0.56	+1.1
2,008,594	+		A4249_RS10005	0.56	+1.7
2,008,595	-		A4249_RS10005	0.56	-1.8
2,008,595	-		A4249_RS10005	0.56	-0.2
2,008,800	-		A4249_RS10005	0.71	-2.1
2,008,800	-		A4249_RS10005	0.71	+0.6
2,008,800	-		A4249_RS10005	0.71	-0.5