Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS09855

Experiment: Cytidine 0.41115 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS09845 and A4249_RS09850 are separated by 73 nucleotidesA4249_RS09850 and A4249_RS09855 are separated by 173 nucleotidesA4249_RS09855 and A4249_RS09860 overlap by 4 nucleotides A4249_RS09845: A4249_RS09845 - YbjN domain-containing protein, at 1,961,541 to 1,962,044 _RS09845 A4249_RS09850: A4249_RS09850 - accessory factor UbiK family protein, at 1,962,118 to 1,962,405 _RS09850 A4249_RS09855: A4249_RS09855 - prolipoprotein diacylglyceryl transferase, at 1,962,579 to 1,963,454 _RS09855 A4249_RS09860: A4249_RS09860 - SAM-dependent methyltransferase, at 1,963,451 to 1,964,536 _RS09860 Position (kb) 1962 1963 1964Strain fitness (log2 ratio) -1 0 1at 1962.447 kb on + strandat 1962.448 kb on - strandat 1963.445 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Cytidine 0.41115 mM (C)
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1,962,447 + +1.3
1,962,448 - +0.9
1,963,445 + +0.2

Or see this region's nucleotide sequence