Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS09470

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
1,890,979	+		A4249_RS09460	0.77	-1.2
1,890,979	+		A4249_RS09460	0.77	+0.1
1,890,979	+		A4249_RS09460	0.77	+0.8
1,890,979	+		A4249_RS09460	0.77	-1.1
1,890,979	+		A4249_RS09460	0.77	+1.1
1,890,979	+		A4249_RS09460	0.77	-1.5
1,890,980	-		A4249_RS09460	0.78	-0.4
1,891,132	+				+0.5
1,891,132	+				-0.0
1,891,132	+				+0.4
1,891,133	-				-1.0
1,891,133	-				-0.1
1,891,133	-				+0.4
1,891,133	-				-0.5
1,891,133	-				-0.1
1,891,184	+				-0.2
1,891,184	+				-0.2
1,891,184	+				+0.2
1,891,184	+				-0.4
1,891,184	+				+0.8
1,891,184	+				-0.1
1,891,184	+				-0.1
1,891,184	+				-0.4
1,891,184	+				-0.3
1,891,184	+				-1.1
1,891,185	-				-0.1
1,891,185	-				+1.3
1,891,185	-				+0.1
1,891,185	-				+1.1
1,891,185	-				+0.9
1,891,185	-				+0.3
1,891,185	-				-0.2
1,891,185	-				-0.7
1,891,185	-				-0.6
1,891,194	+				-0.3
1,891,194	+				-0.1
1,891,195	-				-0.1
1,891,195	-				-0.1
1,891,195	-				-0.4
1,891,389	-		A4249_RS09465	0.21	-0.3
1,891,578	+		A4249_RS09465	0.47	+0.2
1,891,578	+		A4249_RS09465	0.47	-0.9
1,891,578	+		A4249_RS09465	0.47	-1.6
1,891,578	+		A4249_RS09465	0.47	-1.4
1,891,579	-		A4249_RS09465	0.47	-0.1
1,891,745	+		A4249_RS09465	0.71	-0.6
1,891,745	+		A4249_RS09465	0.71	-0.3
1,891,746	-		A4249_RS09465	0.71	-1.4
1,891,746	-		A4249_RS09465	0.71	-0.1
1,891,746	-		A4249_RS09465	0.71	+0.2
1,893,334	+				-0.5
1,893,334	+				+1.2
1,893,334	+				-0.3
1,893,334	+				-0.7
1,893,334	+				+0.6
1,893,334	+				-0.6
1,893,334	+				+0.9
1,893,334	+				-0.3
1,893,334	+				-0.8
1,893,334	+				+1.2
1,893,334	+				+0.5
1,893,334	+				+0.6
1,893,335	-				+0.7
1,893,335	-				+0.3
1,893,335	-				+1.5
1,893,335	-				-0.4
1,893,335	-				+0.2
1,893,335	-				-1.0
1,893,335	-				-0.1
1,893,337	+				+0.1
1,893,337	+				-0.4
1,893,337	+				-1.1
1,893,337	+				-1.5
1,893,337	+				-0.5
1,893,337	+				+0.8
1,893,337	+				-0.8
1,893,337	+				-1.3
1,893,337	+				-0.2
1,893,337	+				+0.2
1,893,337	+				-0.1
1,893,338	-				+0.5
1,893,338	-				+1.2
1,893,338	-				-1.9
1,893,338	-				+0.2
1,893,338	-				+0.2
1,893,338	-				+0.0
1,893,338	-				-1.4
1,893,338	-				+0.5
1,893,339	+				-1.1
1,893,339	+				+0.4
1,893,339	+				+0.2
1,893,339	+				+1.6
1,893,339	+				-0.1
1,893,339	+				-0.9
1,893,339	+				+0.0
1,893,340	-				-0.4
1,893,340	-				+0.0
1,893,340	-				-0.5
1,893,340	-				-0.5
1,893,340	-				+0.1
1,893,340	-				-1.1
1,893,340	-				+0.5
1,893,340	-				+0.5
1,893,408	-				+0.2
1,893,418	+				+0.9
1,893,419	-				-0.3
1,893,419	-				-0.3
1,893,419	-				+0.6
1,893,478	+				+1.6
1,893,478	+				+0.8
1,893,478	+				-1.3
1,893,478	+				+0.1
1,893,478	+				-1.2
1,893,478	+				+2.2
1,893,478	+				+0.7
1,893,478	+				-0.2
1,893,478	+				+0.8
1,893,479	-				-0.2
1,893,479	-				+0.4
1,893,479	-				-0.7
1,893,479	-				-0.7
1,893,479	-				-0.2
1,893,479	-				+1.1
1,893,542	+				+0.8
1,893,542	+				-0.1
1,893,542	+				-0.7
1,893,542	+				-0.2
1,893,542	+				-0.5
1,893,542	+				-0.1
1,893,542	+				-0.5
1,893,542	+				-0.5
1,893,542	+				-0.1
1,893,542	+				-0.3
1,893,542	+				+1.0
1,893,543	-				+0.1
1,893,543	-				+1.0
1,893,543	-				-0.8
1,893,543	-				+0.8
1,893,543	-				-0.7
1,893,543	-				+0.4
1,893,543	-				-0.5
1,893,543	-				+1.3
1,893,543	-				+1.2
1,893,543	-				+0.2
1,893,543	-				+0.8
1,893,543	-				+0.8
1,893,543	-				-1.0
1,893,543	-				+0.1
1,893,543	-				-1.1
1,893,592	+		A4249_RS09475	0.12	+0.0
1,893,592	+		A4249_RS09475	0.12	-0.9
1,893,592	+		A4249_RS09475	0.12	-1.1
1,893,593	-		A4249_RS09475	0.12	-0.4
1,893,593	-		A4249_RS09475	0.12	-1.1
1,893,593	-		A4249_RS09475	0.12	+0.5
1,893,593	-		A4249_RS09475	0.12	-0.9
1,893,593	-		A4249_RS09475	0.12	-0.0
1,893,593	-		A4249_RS09475	0.12	+0.5
1,893,593	-		A4249_RS09475	0.12	-1.2
1,893,593	-		A4249_RS09475	0.12	-1.3
1,893,593	-		A4249_RS09475	0.12	+0.5
1,893,724	+		A4249_RS09475	0.26	-0.5
1,893,724	+		A4249_RS09475	0.26	+1.3
1,893,724	+		A4249_RS09475	0.26	-0.7
1,893,724	+		A4249_RS09475	0.26	-0.7
1,893,724	+		A4249_RS09475	0.26	+0.2
1,893,725	-		A4249_RS09475	0.26	-0.4
1,893,725	-		A4249_RS09475	0.26	-1.5
1,893,725	-		A4249_RS09475	0.26	-0.7
1,893,725	-		A4249_RS09475	0.26	+0.7
1,893,725	-		A4249_RS09475	0.26	+1.1
1,893,725	-		A4249_RS09475	0.26	-0.0
1,893,919	+		A4249_RS09475	0.46	-1.0
1,894,042	+		A4249_RS09475	0.58	-0.6
1,894,042	+		A4249_RS09475	0.58	-1.2
1,894,042	+		A4249_RS09475	0.58	-0.4
1,894,042	+		A4249_RS09475	0.58	+0.8
1,894,042	+		A4249_RS09475	0.58	-1.1
1,894,042	+		A4249_RS09475	0.58	-1.9
1,894,042	+		A4249_RS09475	0.58	+1.2
1,894,042	+		A4249_RS09475	0.58	-0.3
1,894,042	+		A4249_RS09475	0.58	-0.5
1,894,042	+		A4249_RS09475	0.58	+0.1
1,894,042	+		A4249_RS09475	0.58	-0.6
1,894,042	+		A4249_RS09475	0.58	-0.8
1,894,042	+		A4249_RS09475	0.58	+1.0
1,894,042	+		A4249_RS09475	0.58	-0.8
1,894,042	+		A4249_RS09475	0.58	-0.6
1,894,043	-		A4249_RS09475	0.59	-0.4
1,894,043	-		A4249_RS09475	0.59	+0.1
1,894,043	-		A4249_RS09475	0.59	+1.3
1,894,043	-		A4249_RS09475	0.59	-0.5
1,894,043	-		A4249_RS09475	0.59	+0.9
1,894,043	-		A4249_RS09475	0.59	-0.4
1,894,043	-		A4249_RS09475	0.59	+1.0
1,894,043	-		A4249_RS09475	0.59	+0.9
1,894,289	+		A4249_RS09475	0.84	-0.7