Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS09070

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
1,816,385	+		A4249_RS09060	0.68	-1.2
1,816,385	+		A4249_RS09060	0.68	-0.6
1,816,385	+		A4249_RS09060	0.68	+0.8
1,816,385	+		A4249_RS09060	0.68	-1.3
1,816,385	+		A4249_RS09060	0.68	+0.4
1,816,386	-		A4249_RS09060	0.68	+0.1
1,816,386	-		A4249_RS09060	0.68	-0.1
1,816,433	-		A4249_RS09060	0.72	+0.4
1,816,522	+		A4249_RS09060	0.81	+0.8
1,816,522	+		A4249_RS09060	0.81	+1.0
1,816,607	+		A4249_RS09060	0.90	-0.5
1,816,608	-		A4249_RS09060	0.90	-0.6
1,816,608	-		A4249_RS09060	0.90	+0.1
1,816,608	-		A4249_RS09060	0.90	+0.5
1,816,647	-				+0.8
1,816,947	+		A4249_RS09065	0.21	-0.5
1,816,947	+		A4249_RS09065	0.21	+0.6
1,816,947	+		A4249_RS09065	0.21	-0.3
1,816,947	+		A4249_RS09065	0.21	+0.1
1,816,947	+		A4249_RS09065	0.21	-0.2
1,816,947	+		A4249_RS09065	0.21	-0.5
1,816,948	-		A4249_RS09065	0.21	-0.8
1,816,948	-		A4249_RS09065	0.21	-1.8
1,816,948	-		A4249_RS09065	0.21	-1.3
1,816,948	-		A4249_RS09065	0.21	-1.6
1,816,948	-		A4249_RS09065	0.21	+0.1
1,816,949	+		A4249_RS09065	0.22	+0.1
1,816,950	-		A4249_RS09065	0.22	-1.1
1,816,950	-		A4249_RS09065	0.22	-0.4
1,816,950	-		A4249_RS09065	0.22	+0.4
1,816,950	-		A4249_RS09065	0.22	-0.1
1,816,992	+		A4249_RS09065	0.32	+0.0
1,816,992	+		A4249_RS09065	0.32	-0.7
1,816,993	-		A4249_RS09065	0.33	-0.3
1,816,993	-		A4249_RS09065	0.33	+0.4
1,816,993	-		A4249_RS09065	0.33	-0.5
1,817,027	+		A4249_RS09065	0.41	-1.3
1,817,027	+		A4249_RS09065	0.41	+0.1
1,817,027	+		A4249_RS09065	0.41	-0.0
1,817,027	+		A4249_RS09065	0.41	-0.5
1,817,028	-		A4249_RS09065	0.41	-0.5
1,817,028	-		A4249_RS09065	0.41	+0.8
1,817,028	-		A4249_RS09065	0.41	+0.1
1,817,438	+		A4249_RS09070	0.12	+0.3
1,817,438	+		A4249_RS09070	0.12	-0.4
1,817,438	+		A4249_RS09070	0.12	-0.5
1,817,438	+		A4249_RS09070	0.12	-0.2
1,817,438	+		A4249_RS09070	0.12	-0.0
1,817,438	+		A4249_RS09070	0.12	-0.4
1,817,439	-		A4249_RS09070	0.12	-1.2
1,817,439	-		A4249_RS09070	0.12	-0.5
1,817,561	+		A4249_RS09070	0.20	-0.5
1,817,562	-		A4249_RS09070	0.21	+0.2
1,817,562	-		A4249_RS09070	0.21	+0.6
1,817,562	-		A4249_RS09070	0.21	-0.4
1,817,595	+		A4249_RS09070	0.23	-0.2
1,817,595	+		A4249_RS09070	0.23	-0.3
1,817,595	+		A4249_RS09070	0.23	-0.4
1,817,595	+		A4249_RS09070	0.23	-0.5
1,817,595	+		A4249_RS09070	0.23	+1.1
1,817,596	-		A4249_RS09070	0.23	-0.4
1,817,596	-		A4249_RS09070	0.23	-0.9
1,817,596	-		A4249_RS09070	0.23	+0.6
1,817,633	+		A4249_RS09070	0.26	-0.5
1,817,633	+		A4249_RS09070	0.26	+1.0
1,817,634	-		A4249_RS09070	0.26	-0.9
1,817,667	-		A4249_RS09070	0.28	-0.0
1,817,667	-		A4249_RS09070	0.28	+0.5
1,817,667	-		A4249_RS09070	0.28	-0.1
1,817,667	-		A4249_RS09070	0.28	+0.1
1,817,714	+		A4249_RS09070	0.31	+1.3
1,817,785	-		A4249_RS09070	0.36	+0.6
1,817,897	+		A4249_RS09070	0.44	-0.5
1,817,897	+		A4249_RS09070	0.44	+1.3
1,817,897	+		A4249_RS09070	0.44	-0.5
1,817,897	+		A4249_RS09070	0.44	-0.6
1,817,897	+		A4249_RS09070	0.44	-0.0
1,817,897	+		A4249_RS09070	0.44	-0.8
1,817,897	+		A4249_RS09070	0.44	+2.1
1,817,897	+		A4249_RS09070	0.44	-0.9
1,817,897	+		A4249_RS09070	0.44	-1.2
1,817,897	+		A4249_RS09070	0.44	-0.7
1,817,898	-		A4249_RS09070	0.44	-0.5
1,817,898	-		A4249_RS09070	0.44	-0.7
1,817,898	-		A4249_RS09070	0.44	-0.6
1,817,898	-		A4249_RS09070	0.44	-2.1
1,817,898	-		A4249_RS09070	0.44	-1.4
1,817,898	-		A4249_RS09070	0.44	-0.5
1,817,898	-		A4249_RS09070	0.44	+0.9
1,817,898	-		A4249_RS09070	0.44	-1.0
1,817,898	-		A4249_RS09070	0.44	-0.8
1,817,898	-		A4249_RS09070	0.44	-0.4
1,817,898	-		A4249_RS09070	0.44	+0.6
1,817,898	-		A4249_RS09070	0.44	-0.2
1,817,898	-		A4249_RS09070	0.44	-0.4
1,817,898	-		A4249_RS09070	0.44	+0.2
1,817,898	-		A4249_RS09070	0.44	+0.7
1,817,953	-		A4249_RS09070	0.48	-0.6
1,817,996	+		A4249_RS09070	0.51	-0.1
1,817,996	+		A4249_RS09070	0.51	-0.1
1,817,997	-		A4249_RS09070	0.51	-0.1
1,817,997	-		A4249_RS09070	0.51	+1.3
1,817,997	-		A4249_RS09070	0.51	+0.5
1,817,997	-		A4249_RS09070	0.51	+0.6
1,818,356	+		A4249_RS09070	0.76	+0.2
1,818,356	+		A4249_RS09070	0.76	+1.1
1,818,356	+		A4249_RS09070	0.76	+0.2
1,818,356	+		A4249_RS09070	0.76	+0.6
1,818,356	+		A4249_RS09070	0.76	+0.2
1,818,356	+		A4249_RS09070	0.76	+0.1
1,818,356	+		A4249_RS09070	0.76	-1.0
1,818,356	+		A4249_RS09070	0.76	-0.2
1,818,356	+		A4249_RS09070	0.76	+0.1
1,818,356	+		A4249_RS09070	0.76	-0.6
1,818,357	-		A4249_RS09070	0.76	+0.1
1,818,357	-		A4249_RS09070	0.76	-0.7
1,818,357	-		A4249_RS09070	0.76	-1.7
1,818,357	-		A4249_RS09070	0.76	+0.0
1,818,357	-		A4249_RS09070	0.76	-0.8
1,818,357	-		A4249_RS09070	0.76	-0.6
1,818,357	-		A4249_RS09070	0.76	+0.4
1,818,357	-		A4249_RS09070	0.76	-0.3
1,818,357	-		A4249_RS09070	0.76	-0.4
1,818,357	-		A4249_RS09070	0.76	-0.1
1,818,357	-		A4249_RS09070	0.76	+0.7
1,818,357	-		A4249_RS09070	0.76	+0.0
1,818,357	-		A4249_RS09070	0.76	+0.5
1,818,644	-				-0.1
1,818,665	+				-0.4
1,818,665	+				-0.8
1,818,665	+				+0.6
1,818,665	+				-0.8
1,818,666	-				-0.2
1,818,666	-				+0.2
1,818,666	-				-0.9
1,818,666	-				-1.3
1,818,900	+		A4249_RS09075	0.72	+1.2
1,818,901	-		A4249_RS09075	0.73	-0.5
1,818,901	-		A4249_RS09075	0.73	+0.6
1,818,901	-		A4249_RS09075	0.73	+1.4
1,819,020	-		A4249_RS09080	0.16	-1.2
1,819,020	-		A4249_RS09080	0.16	+0.5
1,819,020	-		A4249_RS09080	0.16	+0.1
1,819,030	+		A4249_RS09080	0.19	-1.1
1,819,030	+		A4249_RS09080	0.19	+0.0
1,819,031	-		A4249_RS09080	0.20	-1.1
1,819,031	-		A4249_RS09080	0.20	-0.9
1,819,039	+		A4249_RS09080	0.22	+0.4
1,819,039	+		A4249_RS09080	0.22	+0.4
1,819,039	+		A4249_RS09080	0.22	+0.8
1,819,070	+		A4249_RS09080	0.32	+1.5
1,819,070	+		A4249_RS09080	0.32	-1.3
1,819,071	-		A4249_RS09080	0.33	+0.7
1,819,071	-		A4249_RS09080	0.33	+0.3
1,819,208	-		A4249_RS09080	0.77	-0.8
1,819,219	+		A4249_RS09080	0.81	-0.2
1,819,219	+		A4249_RS09080	0.81	-0.8
1,819,219	+		A4249_RS09080	0.81	-1.1
1,819,219	+		A4249_RS09080	0.81	-0.2
1,819,220	-		A4249_RS09080	0.81	-0.2
1,819,220	-		A4249_RS09080	0.81	+0.1
1,819,220	-		A4249_RS09080	0.81	-0.4
1,819,220	-		A4249_RS09080	0.81	-0.7
1,819,220	-		A4249_RS09080	0.81	-0.1
1,819,225	+		A4249_RS09080	0.83	+0.2
1,819,225	+		A4249_RS09080	0.83	-0.5
1,819,225	+		A4249_RS09080	0.83	-0.0
1,819,225	+		A4249_RS09080	0.83	+1.1
1,819,225	+		A4249_RS09080	0.83	-0.3
1,819,226	-		A4249_RS09080	0.83	+0.8
1,819,226	-		A4249_RS09080	0.83	+0.1
1,819,226	-		A4249_RS09080	0.83	+0.3
1,819,226	-		A4249_RS09080	0.83	-0.7
1,819,318	+		A4249_RS09085	0.13	+0.3
1,819,318	+		A4249_RS09085	0.13	+0.1
1,819,318	+		A4249_RS09085	0.13	-0.9
1,819,318	+		A4249_RS09085	0.13	+0.2
1,819,318	+		A4249_RS09085	0.13	-0.3
1,819,319	-		A4249_RS09085	0.13	-2.8
1,819,319	-		A4249_RS09085	0.13	+0.2
1,819,319	-		A4249_RS09085	0.13	+0.2
1,819,319	-		A4249_RS09085	0.13	+0.1
1,819,331	+		A4249_RS09085	0.17	-0.4
1,819,331	+		A4249_RS09085	0.17	-0.9
1,819,331	+		A4249_RS09085	0.17	+0.2
1,819,331	+		A4249_RS09085	0.17	-0.2
1,819,331	+		A4249_RS09085	0.17	+0.0
1,819,331	+		A4249_RS09085	0.17	-0.9
1,819,331	+		A4249_RS09085	0.17	+0.3
1,819,331	+		A4249_RS09085	0.17	-1.6
1,819,332	-		A4249_RS09085	0.17	-0.2
1,819,332	-		A4249_RS09085	0.17	-0.3
1,819,332	-		A4249_RS09085	0.17	-0.8
1,819,514	+		A4249_RS09085	0.71	-0.1
1,819,514	+		A4249_RS09085	0.71	+0.3
1,819,514	+		A4249_RS09085	0.71	+0.2
1,819,515	-		A4249_RS09085	0.71	+0.9
1,819,515	-		A4249_RS09085	0.71	-1.4
1,819,515	-		A4249_RS09085	0.71	+0.5
1,819,515	-		A4249_RS09085	0.71	-0.3
1,819,546	+		A4249_RS09085	0.80	-0.2
1,819,546	+		A4249_RS09085	0.80	-1.3
1,819,546	+		A4249_RS09085	0.80	-0.2
1,819,546	+		A4249_RS09085	0.80	-0.8
1,819,546	+		A4249_RS09085	0.80	-0.7
1,819,546	+		A4249_RS09085	0.80	+0.2
1,819,546	+		A4249_RS09085	0.80	+1.4
1,819,546	+		A4249_RS09085	0.80	-1.5
1,819,546	+		A4249_RS09085	0.80	-0.4
1,819,546	+		A4249_RS09085	0.80	+0.3
1,819,547	-		A4249_RS09085	0.80	-1.2
1,819,547	-		A4249_RS09085	0.80	-0.3
1,819,547	-		A4249_RS09085	0.80	-1.6
1,819,547	-		A4249_RS09085	0.80	-0.4
1,819,547	-		A4249_RS09085	0.80	+1.0
1,819,547	-		A4249_RS09085	0.80	-0.9
1,819,547	-		A4249_RS09085	0.80	-0.5
1,819,547	-		A4249_RS09085	0.80	+0.5
1,819,547	-		A4249_RS09085	0.80	-2.2
1,819,547	-		A4249_RS09085	0.80	+0.6
1,819,547	-		A4249_RS09085	0.80	-0.0
1,819,549	+		A4249_RS09085	0.81	+0.6
1,819,550	-		A4249_RS09085	0.81	-0.6
1,819,550	-		A4249_RS09085	0.81	-0.5
1,819,550	-		A4249_RS09085	0.81	+0.8