Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS08915

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
1,782,897	+		A4249_RS08910	0.52	+0.0
1,782,897	+		A4249_RS08910	0.52	+0.8
1,782,897	+		A4249_RS08910	0.52	+0.4
1,782,897	+		A4249_RS08910	0.52	+1.7
1,782,898	-		A4249_RS08910	0.53	+2.1
1,782,898	-		A4249_RS08910	0.53	-2.0
1,782,898	-		A4249_RS08910	0.53	+0.4
1,782,898	-		A4249_RS08910	0.53	-0.6
1,782,951	+		A4249_RS08910	0.55	-0.9
1,782,951	+		A4249_RS08910	0.55	+0.2
1,782,951	+		A4249_RS08910	0.55	-0.2
1,782,951	+		A4249_RS08910	0.55	-0.5
1,782,951	+		A4249_RS08910	0.55	+1.4
1,782,951	+		A4249_RS08910	0.55	+1.1
1,782,951	+		A4249_RS08910	0.55	-1.3
1,782,952	-		A4249_RS08910	0.55	-0.7
1,782,952	-		A4249_RS08910	0.55	-0.3
1,782,952	-		A4249_RS08910	0.55	+0.6
1,782,952	-		A4249_RS08910	0.55	-0.3
1,782,952	-		A4249_RS08910	0.55	-1.4
1,782,952	-		A4249_RS08910	0.55	-1.1
1,782,952	-		A4249_RS08910	0.55	-0.5
1,783,077	+		A4249_RS08910	0.62	-0.0
1,783,077	+		A4249_RS08910	0.62	+0.3
1,783,077	+		A4249_RS08910	0.62	-1.5
1,783,077	+		A4249_RS08910	0.62	-0.3
1,783,077	+		A4249_RS08910	0.62	+1.0
1,783,078	-		A4249_RS08910	0.62	-1.9
1,783,152	+		A4249_RS08910	0.66	-0.6
1,783,153	-		A4249_RS08910	0.66	-0.2
1,783,153	-		A4249_RS08910	0.66	+0.1
1,783,153	-		A4249_RS08910	0.66	+1.5
1,783,153	-		A4249_RS08910	0.66	+1.3
1,783,153	-		A4249_RS08910	0.66	+0.3
1,783,248	+		A4249_RS08910	0.71	-0.5
1,783,248	+		A4249_RS08910	0.71	-0.3
1,783,248	+		A4249_RS08910	0.71	+0.9
1,783,249	-		A4249_RS08910	0.71	-0.1
1,783,249	-		A4249_RS08910	0.71	-0.3
1,783,249	-		A4249_RS08910	0.71	-0.0
1,783,249	-		A4249_RS08910	0.71	-0.1
1,783,249	-		A4249_RS08910	0.71	+0.6
1,783,249	-		A4249_RS08910	0.71	+0.7
1,783,365	+		A4249_RS08910	0.77	+2.3
1,783,365	+		A4249_RS08910	0.77	-0.9
1,783,365	+		A4249_RS08910	0.77	+0.2
1,783,366	-		A4249_RS08910	0.77	+0.1
1,783,366	-		A4249_RS08910	0.77	-2.0
1,783,367	+		A4249_RS08910	0.77	-0.4
1,783,367	+		A4249_RS08910	0.77	+0.6
1,783,367	+		A4249_RS08910	0.77	-0.5
1,783,367	+		A4249_RS08910	0.77	+0.1
1,783,367	+		A4249_RS08910	0.77	-0.1
1,783,367	+		A4249_RS08910	0.77	-0.8
1,783,367	+		A4249_RS08910	0.77	+0.7
1,783,367	+		A4249_RS08910	0.77	+1.0
1,783,368	-		A4249_RS08910	0.77	+1.2
1,783,368	-		A4249_RS08910	0.77	-0.9
1,783,368	-		A4249_RS08910	0.77	+0.0
1,783,368	-		A4249_RS08910	0.77	+0.0
1,783,368	-		A4249_RS08910	0.77	-0.6
1,783,497	+		A4249_RS08910	0.84	+1.5
1,783,497	+		A4249_RS08910	0.84	+0.8
1,783,497	+		A4249_RS08910	0.84	-0.0
1,783,497	+		A4249_RS08910	0.84	-0.9
1,783,497	+		A4249_RS08910	0.84	+1.4
1,783,497	+		A4249_RS08910	0.84	-2.1
1,783,497	+		A4249_RS08910	0.84	-0.4
1,783,497	+		A4249_RS08910	0.84	+0.7
1,783,497	+		A4249_RS08910	0.84	+0.5
1,783,497	+		A4249_RS08910	0.84	-2.0
1,783,497	+		A4249_RS08910	0.84	+0.3
1,783,497	+		A4249_RS08910	0.84	+1.0
1,783,498	-		A4249_RS08910	0.84	-0.8
1,783,498	-		A4249_RS08910	0.84	-0.3
1,783,498	-		A4249_RS08910	0.84	-1.6
1,783,498	-		A4249_RS08910	0.84	+1.3
1,783,498	-		A4249_RS08910	0.84	+0.2
1,783,498	-		A4249_RS08910	0.84	-1.0
1,783,498	-		A4249_RS08910	0.84	+0.3
1,783,498	-		A4249_RS08910	0.84	+1.4
1,783,498	-		A4249_RS08910	0.84	-0.3
1,783,498	-		A4249_RS08910	0.84	-0.1
1,783,498	-		A4249_RS08910	0.84	-0.5
1,783,498	-		A4249_RS08910	0.84	+0.0
1,783,499	+		A4249_RS08910	0.84	-0.8
1,783,542	+		A4249_RS08910	0.87	+1.4
1,783,543	-		A4249_RS08910	0.87	-1.5
1,783,543	-		A4249_RS08910	0.87	+0.4
1,783,767	+				-0.4
1,783,767	+				+0.6
1,783,767	+				+0.1
1,783,767	+				-0.9
1,783,767	+				+1.9
1,783,768	-				+0.0
1,783,768	-				-0.7
1,783,768	-				-0.7
1,783,791	+				-0.7
1,783,792	-				-0.5
1,783,792	-				-1.3
1,783,839	-				-0.3
1,784,074	+		A4249_RS08915	0.22	-0.8
1,784,074	+		A4249_RS08915	0.22	-0.6
1,784,074	+		A4249_RS08915	0.22	+0.1
1,784,074	+		A4249_RS08915	0.22	+0.3
1,784,074	+		A4249_RS08915	0.22	-2.3
1,784,075	-		A4249_RS08915	0.22	-1.1
1,784,075	-		A4249_RS08915	0.22	-1.3
1,784,075	-		A4249_RS08915	0.22	-0.7
1,784,120	+		A4249_RS08915	0.27	-0.1
1,784,120	+		A4249_RS08915	0.27	-1.1
1,784,121	-		A4249_RS08915	0.27	+0.1
1,784,122	+		A4249_RS08915	0.27	-0.8
1,784,122	+		A4249_RS08915	0.27	+0.4
1,784,122	+		A4249_RS08915	0.27	-1.2
1,784,123	-		A4249_RS08915	0.27	-1.0
1,784,414	-		A4249_RS08915	0.58	-0.7
1,784,544	+		A4249_RS08915	0.71	+0.8
1,784,544	+		A4249_RS08915	0.71	-1.0
1,784,544	+		A4249_RS08915	0.71	-0.5
1,784,545	-		A4249_RS08915	0.71	+0.4
1,784,697	+		A4249_RS08915	0.87	-0.2
1,784,697	+		A4249_RS08915	0.87	+0.4
1,784,698	-		A4249_RS08915	0.88	-0.5
1,784,845	+				-0.1
1,784,845	+				-0.6
1,784,845	+				-0.7
1,784,845	+				-1.6
1,784,845	+				+0.3
1,784,846	-				-0.4
1,784,846	-				+1.4
1,784,846	-				-0.2
1,784,846	-				+0.1
1,784,846	-				-0.7
1,784,855	-				-0.6
1,784,855	-				+0.1
1,785,239	+		A4249_RS08920	0.31	+1.1
1,785,239	+		A4249_RS08920	0.31	+0.3
1,785,239	+		A4249_RS08920	0.31	+0.1
1,785,240	-		A4249_RS08920	0.31	-0.4
1,785,240	-		A4249_RS08920	0.31	+0.0
1,785,772	+		A4249_RS08920	0.71	-2.4
1,785,772	+		A4249_RS08920	0.71	+0.0
1,785,773	-		A4249_RS08920	0.71	+0.1
1,785,784	+		A4249_RS08920	0.72	-1.3
1,785,784	+		A4249_RS08920	0.72	-0.3
1,785,784	+		A4249_RS08920	0.72	-0.4
1,785,784	+		A4249_RS08920	0.72	+0.7
1,785,784	+		A4249_RS08920	0.72	-0.2
1,785,784	+		A4249_RS08920	0.72	-1.1
1,785,784	+		A4249_RS08920	0.72	+1.7
1,785,784	+		A4249_RS08920	0.72	-0.2
1,785,784	+		A4249_RS08920	0.72	+0.1
1,785,785	-		A4249_RS08920	0.72	+0.3
1,785,785	-		A4249_RS08920	0.72	-0.8
1,785,785	-		A4249_RS08920	0.72	+0.3
1,785,785	-		A4249_RS08920	0.72	-1.2
1,785,785	-		A4249_RS08920	0.72	+0.5
1,785,785	-		A4249_RS08920	0.72	-0.1
1,785,785	-		A4249_RS08920	0.72	-1.0
1,785,786	+		A4249_RS08920	0.72	+0.2
1,785,786	+		A4249_RS08920	0.72	-1.2
1,785,786	+		A4249_RS08920	0.72	-1.2
1,785,786	+		A4249_RS08920	0.72	+0.4
1,785,786	+		A4249_RS08920	0.72	+0.7
1,785,786	+		A4249_RS08920	0.72	-0.0
1,785,786	+		A4249_RS08920	0.72	+0.6
1,785,786	+		A4249_RS08920	0.72	+0.1
1,785,787	-		A4249_RS08920	0.72	-1.1
1,785,787	-		A4249_RS08920	0.72	-0.6
1,785,787	-		A4249_RS08920	0.72	+0.4
1,785,787	-		A4249_RS08920	0.72	-0.7
1,785,787	-		A4249_RS08920	0.72	-0.9
1,785,808	+		A4249_RS08920	0.73	+0.4
1,785,808	+		A4249_RS08920	0.73	-0.1
1,785,808	+		A4249_RS08920	0.73	+0.1
1,785,808	+		A4249_RS08920	0.73	-0.2
1,785,808	+		A4249_RS08920	0.73	+1.2
1,785,808	+		A4249_RS08920	0.73	-1.6
1,785,808	+		A4249_RS08920	0.73	-1.1
1,785,808	+		A4249_RS08920	0.73	+0.7
1,785,808	+		A4249_RS08920	0.73	-0.7
1,785,808	+		A4249_RS08920	0.73	-0.4
1,785,808	+		A4249_RS08920	0.73	-1.7
1,785,808	+		A4249_RS08920	0.73	-0.5
1,785,808	+		A4249_RS08920	0.73	+0.7
1,785,808	+		A4249_RS08920	0.73	-1.0
1,785,808	+		A4249_RS08920	0.73	-0.2
1,785,808	+		A4249_RS08920	0.73	-0.3
1,785,809	-		A4249_RS08920	0.73	+1.0
1,785,809	-		A4249_RS08920	0.73	+0.9
1,785,809	-		A4249_RS08920	0.73	-0.2
1,785,809	-		A4249_RS08920	0.73	-1.5
1,785,809	-		A4249_RS08920	0.73	-0.4
1,785,809	-		A4249_RS08920	0.73	-0.1
1,785,809	-		A4249_RS08920	0.73	-1.5
1,785,809	-		A4249_RS08920	0.73	-0.6
1,785,809	-		A4249_RS08920	0.73	-0.5
1,785,809	-		A4249_RS08920	0.73	-0.1
1,785,809	-		A4249_RS08920	0.73	+0.9