Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS08725

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
1,751,324	+		A4249_RS08715	0.29	-0.8
1,751,325	-		A4249_RS08715	0.29	-0.1
1,751,325	-		A4249_RS08715	0.29	+0.7
1,751,484	+		A4249_RS08715	0.61	-1.1
1,751,484	+		A4249_RS08715	0.61	+1.2
1,751,484	+		A4249_RS08715	0.61	-0.8
1,751,484	+		A4249_RS08715	0.61	-1.9
1,751,484	+		A4249_RS08715	0.61	+0.5
1,751,484	+		A4249_RS08715	0.61	-1.7
1,751,484	+		A4249_RS08715	0.61	+0.7
1,751,484	+		A4249_RS08715	0.61	+0.7
1,751,485	-		A4249_RS08715	0.61	-0.3
1,751,485	-		A4249_RS08715	0.61	-1.2
1,751,485	-		A4249_RS08715	0.61	-1.1
1,751,485	-		A4249_RS08715	0.61	-0.7
1,751,622	+		A4249_RS08715	0.89	-0.5
1,751,622	+		A4249_RS08715	0.89	-1.0
1,751,622	+		A4249_RS08715	0.89	-0.4
1,751,622	+		A4249_RS08715	0.89	+0.1
1,751,622	+		A4249_RS08715	0.89	-1.1
1,751,622	+		A4249_RS08715	0.89	-0.3
1,751,622	+		A4249_RS08715	0.89	+0.3
1,751,622	+		A4249_RS08715	0.89	-0.6
1,751,622	+		A4249_RS08715	0.89	+0.3
1,751,622	+		A4249_RS08715	0.89	+0.5
1,751,623	-		A4249_RS08715	0.89	-0.2
1,751,623	-		A4249_RS08715	0.89	-0.9
1,751,623	-		A4249_RS08715	0.89	-0.6
1,751,623	-		A4249_RS08715	0.89	-0.1
1,751,623	-		A4249_RS08715	0.89	+0.2
1,751,623	-		A4249_RS08715	0.89	-0.4
1,751,623	-		A4249_RS08715	0.89	+0.4
1,751,623	-		A4249_RS08715	0.89	-0.7
1,751,623	-		A4249_RS08715	0.89	-0.3
1,751,624	+		A4249_RS08715	0.89	-0.5
1,751,624	+		A4249_RS08715	0.89	-0.6
1,751,624	+		A4249_RS08715	0.89	+0.2
1,751,624	+		A4249_RS08715	0.89	-0.4
1,751,625	-		A4249_RS08715	0.89	+0.1
1,751,625	-		A4249_RS08715	0.89	-0.3
1,751,625	-		A4249_RS08715	0.89	-0.3
1,751,703	-				-1.1
1,751,912	+		A4249_RS08720	0.60	-0.1
1,751,913	-		A4249_RS08720	0.60	-0.8
1,752,025	+		A4249_RS08720	0.88	-0.7
1,752,025	+		A4249_RS08720	0.88	-0.6
1,752,025	+		A4249_RS08720	0.88	+1.1
1,752,025	+		A4249_RS08720	0.88	+0.5
1,752,025	+		A4249_RS08720	0.88	+1.4
1,752,025	+		A4249_RS08720	0.88	-1.1
1,752,025	+		A4249_RS08720	0.88	+0.4
1,752,026	-		A4249_RS08720	0.89	+1.5
1,752,026	-		A4249_RS08720	0.89	-0.9
1,752,037	+				+1.0
1,752,206	+				-0.3
1,752,223	+				-0.5
1,752,224	-				-0.4
1,752,224	-				+0.1
1,752,224	-				-0.6
1,752,224	-				-0.1
1,752,511	+		A4249_RS08725	0.77	+0.8
1,752,511	+		A4249_RS08725	0.77	-0.9
1,752,511	+		A4249_RS08725	0.77	-0.8
1,752,512	-		A4249_RS08725	0.77	-0.7
1,752,512	-		A4249_RS08725	0.77	-0.5
1,752,512	-		A4249_RS08725	0.77	-1.6
1,752,512	-		A4249_RS08725	0.77	-0.1
1,752,512	-		A4249_RS08725	0.77	-0.8
1,752,598	-				-0.5
1,752,629	+				+0.0
1,752,630	-				-2.0
1,752,630	-				-0.7
1,752,689	-				-2.4
1,752,689	-				-0.4
1,752,703	+				-0.9
1,752,704	-				+1.1
1,752,735	+		A4249_RS08730	0.12	-1.3
1,752,771	+		A4249_RS08730	0.21	+0.0
1,752,771	+		A4249_RS08730	0.21	+0.2
1,752,771	+		A4249_RS08730	0.21	-0.5
1,752,771	+		A4249_RS08730	0.21	-0.3
1,752,772	-		A4249_RS08730	0.21	+2.1
1,752,785	+		A4249_RS08730	0.24	+0.0
1,752,786	-		A4249_RS08730	0.24	-0.5
1,752,786	-		A4249_RS08730	0.24	+1.0
1,752,786	-		A4249_RS08730	0.24	+0.2
1,752,942	+		A4249_RS08730	0.59	+1.5
1,752,942	+		A4249_RS08730	0.59	+0.1
1,752,942	+		A4249_RS08730	0.59	+1.5
1,752,942	+		A4249_RS08730	0.59	+0.4
1,752,942	+		A4249_RS08730	0.59	-0.1
1,752,967	+		A4249_RS08730	0.65	-0.9
1,752,967	+		A4249_RS08730	0.65	-0.1
1,752,967	+		A4249_RS08730	0.65	-0.2
1,752,967	+		A4249_RS08730	0.65	-0.6
1,752,967	+		A4249_RS08730	0.65	-0.1
1,752,967	+		A4249_RS08730	0.65	+0.4
1,752,968	-		A4249_RS08730	0.65	-0.1
1,752,968	-		A4249_RS08730	0.65	+1.3
1,752,968	-		A4249_RS08730	0.65	+0.2
1,752,968	-		A4249_RS08730	0.65	-0.6
1,752,968	-		A4249_RS08730	0.65	-0.6
1,752,968	-		A4249_RS08730	0.65	-0.6
1,752,979	+		A4249_RS08730	0.68	-0.3
1,752,979	+		A4249_RS08730	0.68	-0.3
1,752,980	-		A4249_RS08730	0.68	+1.1
1,752,980	-		A4249_RS08730	0.68	-0.1
1,753,010	+		A4249_RS08730	0.75	+0.4
1,753,012	+		A4249_RS08730	0.75	-0.0
1,753,012	+		A4249_RS08730	0.75	+1.3
1,753,012	+		A4249_RS08730	0.75	-0.1
1,753,012	+		A4249_RS08730	0.75	-1.0
1,753,012	+		A4249_RS08730	0.75	+1.1
1,753,012	+		A4249_RS08730	0.75	-0.6
1,753,013	-		A4249_RS08730	0.76	-0.1
1,753,013	-		A4249_RS08730	0.76	-0.7
1,753,013	-		A4249_RS08730	0.76	+0.1
1,753,013	-		A4249_RS08730	0.76	-2.7
1,753,013	-		A4249_RS08730	0.76	+0.3
1,753,034	+		A4249_RS08730	0.80	+0.3
1,753,034	+		A4249_RS08730	0.80	-0.5
1,753,035	-		A4249_RS08730	0.80	-0.0
1,753,035	-		A4249_RS08730	0.80	-1.1
1,753,035	-		A4249_RS08730	0.80	-0.3
1,753,035	-		A4249_RS08730	0.80	+1.2
1,753,035	-		A4249_RS08730	0.80	-1.3
1,753,039	+		A4249_RS08730	0.81	+0.1
1,753,039	+		A4249_RS08730	0.81	+0.2
1,753,059	+		A4249_RS08730	0.86	-0.1
1,753,059	+		A4249_RS08730	0.86	-1.6
1,753,059	+		A4249_RS08730	0.86	+0.6
1,753,059	+		A4249_RS08730	0.86	+0.2
1,753,060	-		A4249_RS08730	0.86	-0.6
1,753,060	-		A4249_RS08730	0.86	-0.8
1,753,070	+		A4249_RS08730	0.88	-1.0
1,753,070	+		A4249_RS08730	0.88	+0.1
1,753,070	+		A4249_RS08730	0.88	-0.2
1,753,105	-				+1.1
1,753,109	-				-0.2
1,753,131	+				-0.2
1,753,131	+				-0.6
1,753,131	+				+0.5
1,753,131	+				-0.1
1,753,131	+				-0.1
1,753,132	-				+0.5
1,753,132	-				+0.5
1,753,132	-				+1.3
1,753,132	-				+0.5
1,753,132	-				+0.2
1,753,132	-				-1.2