Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS08275

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
1,662,232	+		A4249_RS08265	0.75	-1.3
1,662,232	+		A4249_RS08265	0.75	-0.8
1,662,233	-		A4249_RS08265	0.75	+1.2
1,662,233	-		A4249_RS08265	0.75	-0.4
1,662,233	-		A4249_RS08265	0.75	+0.5
1,662,238	+		A4249_RS08265	0.76	-1.4
1,662,238	+		A4249_RS08265	0.76	-1.0
1,662,238	+		A4249_RS08265	0.76	+1.4
1,662,238	+		A4249_RS08265	0.76	-0.6
1,662,239	-		A4249_RS08265	0.76	-0.3
1,662,239	-		A4249_RS08265	0.76	-0.3
1,662,376	+				-1.3
1,662,389	+				-0.7
1,662,389	+				+0.8
1,662,389	+				+0.3
1,662,389	+				-0.3
1,662,389	+				+0.7
1,662,389	+				+0.9
1,662,389	+				-1.3
1,662,389	+				-0.5
1,662,389	+				-0.7
1,662,389	+				+0.8
1,662,389	+				-0.0
1,662,389	+				-0.8
1,662,389	+				+0.6
1,662,389	+				+1.7
1,662,389	+				+0.2
1,662,389	+				-0.7
1,662,389	+				+0.3
1,662,389	+				+0.7
1,662,390	-				+1.4
1,662,390	-				-0.5
1,662,390	-				-1.2
1,662,390	-				+0.2
1,662,390	-				-0.2
1,662,390	-				-0.6
1,662,390	-				-0.8
1,662,390	-				+0.5
1,662,390	-				+0.7
1,662,390	-				+0.2
1,662,400	+				-0.4
1,662,401	-				-0.5
1,662,401	-				+0.0
1,662,498	+				-0.6
1,662,498	+				-1.3
1,662,498	+				-1.5
1,662,498	+				-0.1
1,662,498	+				-1.3
1,662,498	+				+0.2
1,662,498	+				+0.5
1,662,498	+				-0.7
1,662,498	+				-0.9
1,662,498	+				+0.2
1,662,498	+				-0.6
1,662,499	-				+0.4
1,662,499	-				-0.4
1,662,499	-				+0.2
1,662,499	-				+0.2
1,662,499	-				+1.0
1,662,499	-				+0.3
1,662,499	-				+1.3
1,662,499	-				+0.7
1,662,499	-				+0.3
1,662,499	-				+0.5
1,662,682	+		A4249_RS08270	0.35	-0.0
1,662,683	-		A4249_RS08270	0.35	+0.3
1,662,708	-		A4249_RS08270	0.39	+0.0
1,662,708	-		A4249_RS08270	0.39	+1.5
1,662,769	+		A4249_RS08270	0.48	-0.0
1,662,769	+		A4249_RS08270	0.48	+0.7
1,662,769	+		A4249_RS08270	0.48	-0.0
1,662,770	-		A4249_RS08270	0.48	+1.3
1,662,770	-		A4249_RS08270	0.48	+0.1
1,662,938	-		A4249_RS08270	0.73	+0.3
1,663,045	+		A4249_RS08270	0.90	+2.1
1,663,111	+				+0.5
1,663,111	+				+0.6
1,663,111	+				-0.6
1,663,111	+				+0.9
1,663,112	-				+1.0
1,663,281	-		A4249_RS08275	0.24	+0.7
1,663,385	+		A4249_RS08275	0.36	+0.0
1,663,385	+		A4249_RS08275	0.36	+0.3
1,663,385	+		A4249_RS08275	0.36	-1.2
1,663,385	+		A4249_RS08275	0.36	-0.7
1,663,386	-		A4249_RS08275	0.36	+1.4
1,663,386	-		A4249_RS08275	0.36	-0.6
1,663,386	-		A4249_RS08275	0.36	+0.3
1,663,386	-		A4249_RS08275	0.36	-0.2
1,663,386	-		A4249_RS08275	0.36	+0.1
1,663,434	+		A4249_RS08275	0.42	+0.4
1,663,434	+		A4249_RS08275	0.42	-0.0
1,663,434	+		A4249_RS08275	0.42	-1.2
1,663,434	+		A4249_RS08275	0.42	-0.3
1,663,434	+		A4249_RS08275	0.42	+0.5
1,663,435	-		A4249_RS08275	0.42	-0.7
1,663,435	-		A4249_RS08275	0.42	+0.1
1,663,435	-		A4249_RS08275	0.42	-0.5
1,663,435	-		A4249_RS08275	0.42	-0.9
1,663,435	-		A4249_RS08275	0.42	-0.1
1,663,435	-		A4249_RS08275	0.42	-0.2
1,663,435	-		A4249_RS08275	0.42	-0.1
1,663,476	+		A4249_RS08275	0.47	-0.5
1,663,476	+		A4249_RS08275	0.47	-0.2
1,663,477	-		A4249_RS08275	0.47	+0.5
1,663,519	+		A4249_RS08275	0.52	-0.3
1,663,519	+		A4249_RS08275	0.52	+0.0
1,663,520	-		A4249_RS08275	0.52	-0.6
1,663,521	+		A4249_RS08275	0.52	-0.3
1,663,521	+		A4249_RS08275	0.52	-1.1
1,663,521	+		A4249_RS08275	0.52	+0.3
1,663,521	+		A4249_RS08275	0.52	-0.8
1,663,521	+		A4249_RS08275	0.52	-0.0
1,663,521	+		A4249_RS08275	0.52	-1.0
1,663,521	+		A4249_RS08275	0.52	-0.2
1,663,522	-		A4249_RS08275	0.53	-1.2
1,663,522	-		A4249_RS08275	0.53	+0.1
1,663,522	-		A4249_RS08275	0.53	-0.8
1,663,522	-		A4249_RS08275	0.53	+0.7
1,663,522	-		A4249_RS08275	0.53	+1.4
1,663,522	-		A4249_RS08275	0.53	+0.8
1,663,522	-		A4249_RS08275	0.53	-0.4
1,663,522	-		A4249_RS08275	0.53	-1.1
1,663,522	-		A4249_RS08275	0.53	-0.6
1,663,522	-		A4249_RS08275	0.53	+0.0
1,663,522	-		A4249_RS08275	0.53	-0.1
1,663,539	+		A4249_RS08275	0.55	+0.2
1,663,539	+		A4249_RS08275	0.55	-0.7
1,663,539	+		A4249_RS08275	0.55	+2.4
1,663,539	+		A4249_RS08275	0.55	-0.2
1,663,539	+		A4249_RS08275	0.55	-1.3
1,663,539	+		A4249_RS08275	0.55	-0.8
1,663,539	+		A4249_RS08275	0.55	-0.6
1,663,539	+		A4249_RS08275	0.55	-0.3
1,663,540	-		A4249_RS08275	0.55	+0.5
1,663,540	-		A4249_RS08275	0.55	+0.3
1,663,540	-		A4249_RS08275	0.55	+0.7
1,663,540	-		A4249_RS08275	0.55	-0.3
1,663,540	-		A4249_RS08275	0.55	-0.3
1,663,540	-		A4249_RS08275	0.55	+0.0
1,663,540	-		A4249_RS08275	0.55	+0.4
1,663,540	-		A4249_RS08275	0.55	-0.8
1,663,540	-		A4249_RS08275	0.55	+0.1
1,663,597	-		A4249_RS08275	0.62	-1.2
1,663,597	-		A4249_RS08275	0.62	+0.3
1,663,746	+		A4249_RS08275	0.80	-0.2
1,663,747	-		A4249_RS08275	0.80	-0.0
1,663,863	+				+0.8
1,663,863	+				-0.1
1,663,863	+				+1.2
1,663,863	+				+0.3
1,663,863	+				-0.1
1,663,864	-				+0.7
1,663,963	+				-0.4
1,663,963	+				-0.4
1,663,963	+				+0.1
1,663,964	-				-0.7
1,664,031	+				+0.9
1,664,031	+				+1.3
1,664,032	-				-0.6
1,664,088	+				-1.1
1,664,089	-				-0.4
1,664,115	+				-0.0
1,664,115	+				-1.2
1,664,115	+				+0.7
1,664,115	+				+2.1
1,664,116	-				+0.7
1,664,116	-				+1.0
1,664,116	-				+0.2
1,664,116	-				-0.5
1,664,133	+				-0.3
1,664,133	+				+0.0
1,664,134	-				+0.7
1,664,215	+		A4249_RS08280	0.13	-0.6
1,664,271	+		A4249_RS08280	0.20	-1.3
1,664,271	+		A4249_RS08280	0.20	+1.4
1,664,271	+		A4249_RS08280	0.20	-0.6
1,664,272	-		A4249_RS08280	0.20	+0.4
1,664,272	-		A4249_RS08280	0.20	-0.2
1,664,272	-		A4249_RS08280	0.20	-1.6
1,664,290	+		A4249_RS08280	0.23	-1.7
1,664,290	+		A4249_RS08280	0.23	+0.4
1,664,291	-		A4249_RS08280	0.23	+1.5
1,664,291	-		A4249_RS08280	0.23	-0.6
1,664,306	+		A4249_RS08280	0.25	-0.7
1,664,306	+		A4249_RS08280	0.25	+0.8
1,664,307	-		A4249_RS08280	0.25	-0.0
1,664,307	-		A4249_RS08280	0.25	+1.3
1,664,307	-		A4249_RS08280	0.25	-1.0
1,664,307	-		A4249_RS08280	0.25	-0.6
1,664,346	+		A4249_RS08280	0.30	-0.8
1,664,398	+		A4249_RS08280	0.37	-2.5
1,664,398	+		A4249_RS08280	0.37	+0.6
1,664,399	-		A4249_RS08280	0.37	-0.5
1,664,399	-		A4249_RS08280	0.37	-0.4
1,664,399	-		A4249_RS08280	0.37	-0.8
1,664,399	-		A4249_RS08280	0.37	-0.6
1,664,399	-		A4249_RS08280	0.37	+1.2
1,664,439	+		A4249_RS08280	0.42	-0.2
1,664,440	-		A4249_RS08280	0.42	+1.1
1,664,533	+		A4249_RS08280	0.54	+0.4
1,664,534	-		A4249_RS08280	0.54	+0.4
1,664,534	-		A4249_RS08280	0.54	+0.3
1,664,800	+		A4249_RS08280	0.89	+1.3
1,664,800	+		A4249_RS08280	0.89	+0.5
1,664,800	+		A4249_RS08280	0.89	-1.3
1,664,800	+		A4249_RS08280	0.89	-1.1
1,664,801	-		A4249_RS08280	0.89	+0.9