Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07930

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
1,584,637	+				+0.5
1,584,637	+				+0.3
1,584,859	+		A4249_RS07925	0.22	+0.8
1,584,859	+		A4249_RS07925	0.22	+0.2
1,584,997	+		A4249_RS07925	0.36	-0.4
1,584,997	+		A4249_RS07925	0.36	-0.3
1,584,997	+		A4249_RS07925	0.36	+2.0
1,584,997	+		A4249_RS07925	0.36	-0.1
1,584,998	-		A4249_RS07925	0.36	-1.0
1,584,998	-		A4249_RS07925	0.36	+0.4
1,585,072	+		A4249_RS07925	0.44	-0.7
1,585,072	+		A4249_RS07925	0.44	-0.6
1,585,073	-		A4249_RS07925	0.44	-0.5
1,585,073	-		A4249_RS07925	0.44	-1.7
1,585,094	-		A4249_RS07925	0.46	-0.3
1,585,162	+		A4249_RS07925	0.53	+0.4
1,585,398	+		A4249_RS07925	0.78	-1.3
1,585,531	+				-0.6
1,585,531	+				-0.3
1,585,532	-				-1.8
1,585,532	-				-0.4
1,585,532	-				-1.5
1,585,558	+				+0.1
1,585,558	+				-0.3
1,585,558	+				-0.5
1,585,558	+				-0.2
1,585,558	+				+0.2
1,585,558	+				-0.1
1,585,559	-				+1.0
1,585,752	+		A4249_RS07930	0.14	-0.4
1,585,752	+		A4249_RS07930	0.14	+0.8
1,585,753	-		A4249_RS07930	0.14	-1.2
1,585,753	-		A4249_RS07930	0.14	-0.1
1,585,753	-		A4249_RS07930	0.14	-0.6
1,585,836	+		A4249_RS07930	0.21	-0.3
1,585,836	+		A4249_RS07930	0.21	-0.2
1,585,836	+		A4249_RS07930	0.21	-0.2
1,585,858	+		A4249_RS07930	0.23	-0.8
1,585,858	+		A4249_RS07930	0.23	-0.2
1,585,858	+		A4249_RS07930	0.23	+0.3
1,585,858	+		A4249_RS07930	0.23	-1.9
1,585,858	+		A4249_RS07930	0.23	+0.7
1,585,859	-		A4249_RS07930	0.23	+1.0
1,585,859	-		A4249_RS07930	0.23	+0.8
1,585,905	+		A4249_RS07930	0.28	-1.3
1,585,905	+		A4249_RS07930	0.28	-0.4
1,585,905	+		A4249_RS07930	0.28	-2.5
1,585,905	+		A4249_RS07930	0.28	-0.8
1,585,905	+		A4249_RS07930	0.28	-0.5
1,585,905	+		A4249_RS07930	0.28	-0.7
1,585,905	+		A4249_RS07930	0.28	+1.0
1,585,906	-		A4249_RS07930	0.28	-0.9
1,585,906	-		A4249_RS07930	0.28	+1.5
1,585,906	-		A4249_RS07930	0.28	+0.0
1,585,906	-		A4249_RS07930	0.28	+0.1
1,586,106	+		A4249_RS07930	0.46	-0.5
1,586,106	+		A4249_RS07930	0.46	+0.5
1,586,106	+		A4249_RS07930	0.46	-0.7
1,586,106	+		A4249_RS07930	0.46	+0.8
1,586,106	+		A4249_RS07930	0.46	-1.1
1,586,107	-		A4249_RS07930	0.46	-0.6
1,586,107	-		A4249_RS07930	0.46	-0.5
1,586,107	-		A4249_RS07930	0.46	-0.5
1,586,107	-		A4249_RS07930	0.46	+1.3
1,586,115	+		A4249_RS07930	0.47	-1.0
1,586,161	-		A4249_RS07930	0.51	-1.3
1,586,332	+		A4249_RS07930	0.67	-0.9
1,586,333	-		A4249_RS07930	0.67	-0.9
1,586,333	-		A4249_RS07930	0.67	-0.2
1,586,333	-		A4249_RS07930	0.67	-0.8
1,586,333	-		A4249_RS07930	0.67	-0.2
1,586,333	-		A4249_RS07930	0.67	-0.7
1,586,478	+		A4249_RS07930	0.81	-0.5
1,586,479	-		A4249_RS07930	0.81	-0.7
1,586,479	-		A4249_RS07930	0.81	-0.2
1,586,543	+		A4249_RS07930	0.87	+0.5
1,586,544	-		A4249_RS07930	0.87	-0.6
1,586,685	+				-1.4
1,586,685	+				-0.5
1,586,685	+				-0.0
1,586,685	+				+0.1
1,586,685	+				+0.0
1,586,685	+				-0.9
1,586,685	+				+1.8
1,586,685	+				-0.8
1,586,685	+				+0.4
1,586,685	+				-0.1
1,586,686	-				+1.7
1,586,686	-				-0.4
1,586,686	-				+0.8
1,586,686	-				-1.0
1,586,686	-				-0.5
1,586,686	-				+0.1
1,586,686	-				+1.3
1,586,686	-				-1.9
1,586,686	-				-0.3
1,586,686	-				-1.8
1,586,686	-				-0.6
1,586,772	+				-1.3
1,586,773	-				+0.8
1,586,838	-				-0.7
1,586,838	-				-2.2
1,587,060	+		A4249_RS07935	0.14	-0.1
1,587,147	+		A4249_RS07935	0.17	-1.0
1,587,147	+		A4249_RS07935	0.17	-0.2
1,587,147	+		A4249_RS07935	0.17	-0.6
1,587,147	+		A4249_RS07935	0.17	-0.7
1,587,147	+		A4249_RS07935	0.17	-0.1
1,587,148	-		A4249_RS07935	0.17	-0.6
1,587,148	-		A4249_RS07935	0.17	-1.1
1,587,148	-		A4249_RS07935	0.17	-0.3
1,587,148	-		A4249_RS07935	0.17	+0.3
1,587,148	-		A4249_RS07935	0.17	-0.6
1,587,188	+		A4249_RS07935	0.19	+1.5
1,587,189	-		A4249_RS07935	0.19	-0.1
1,587,189	-		A4249_RS07935	0.19	-0.4
1,587,246	+		A4249_RS07935	0.21	-1.5
1,587,246	+		A4249_RS07935	0.21	-0.1
1,587,246	+		A4249_RS07935	0.21	-1.6
1,587,246	+		A4249_RS07935	0.21	-0.3
1,587,246	+		A4249_RS07935	0.21	-0.8
1,587,246	+		A4249_RS07935	0.21	+0.6
1,587,246	+		A4249_RS07935	0.21	-0.1
1,587,246	+		A4249_RS07935	0.21	-0.6
1,587,247	-		A4249_RS07935	0.21	-0.8
1,587,247	-		A4249_RS07935	0.21	+0.6
1,587,247	-		A4249_RS07935	0.21	-1.6
1,587,247	-		A4249_RS07935	0.21	-0.7
1,587,247	-		A4249_RS07935	0.21	-0.9
1,587,247	-		A4249_RS07935	0.21	+0.1
1,587,247	-		A4249_RS07935	0.21	-1.4
1,587,297	+		A4249_RS07935	0.23	-0.2
1,587,387	+		A4249_RS07935	0.26	+0.1
1,587,388	-		A4249_RS07935	0.26	+0.9
1,587,447	+		A4249_RS07935	0.28	-1.3
1,587,447	+		A4249_RS07935	0.28	+0.1
1,587,448	-		A4249_RS07935	0.28	-2.0
1,587,448	-		A4249_RS07935	0.28	+0.1
1,587,448	-		A4249_RS07935	0.28	+0.9
1,587,448	-		A4249_RS07935	0.28	-0.1
1,587,448	-		A4249_RS07935	0.28	+0.1
1,587,527	+		A4249_RS07935	0.31	-1.0
1,587,527	+		A4249_RS07935	0.31	+0.3
1,587,558	+		A4249_RS07935	0.33	-0.4
1,587,558	+		A4249_RS07935	0.33	-0.5
1,587,559	-		A4249_RS07935	0.33	+0.7
1,587,559	-		A4249_RS07935	0.33	-0.6
1,587,559	-		A4249_RS07935	0.33	+0.2
1,587,559	-		A4249_RS07935	0.33	-0.5