Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06920

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
1,402,221	+				+1.9
1,402,222	-				-0.9
1,402,259	+		A4249_RS16550	0.10	+0.4
1,402,325	-		A4249_RS16550	0.32	+0.7
1,402,408	+		A4249_RS16550	0.59	-0.4
1,402,408	+		A4249_RS16550	0.59	+0.6
1,402,409	-		A4249_RS16550	0.60	+0.3
1,402,409	-		A4249_RS16550	0.60	+0.4
1,402,577	+				-1.1
1,402,577	+				-0.4
1,402,577	+				+0.5
1,402,578	-				-1.1
1,402,578	-				-1.9
1,402,578	-				-2.1
1,402,578	-				-0.3
1,402,655	+		A4249_RS06915	0.20	+1.1
1,402,656	-		A4249_RS06915	0.20	-1.0
1,402,660	+		A4249_RS06915	0.20	-1.9
1,402,660	+		A4249_RS06915	0.20	+0.1
1,402,660	+		A4249_RS06915	0.20	-0.8
1,402,661	-		A4249_RS06915	0.21	+0.2
1,402,698	+		A4249_RS06915	0.27	-0.2
1,402,698	+		A4249_RS06915	0.27	-0.4
1,402,699	-		A4249_RS06915	0.27	+0.5
1,402,699	-		A4249_RS06915	0.27	-0.2
1,402,699	-		A4249_RS06915	0.27	+0.5
1,402,713	+		A4249_RS06915	0.29	-0.5
1,402,714	-		A4249_RS06915	0.30	-2.6
1,402,714	-		A4249_RS06915	0.30	+0.3
1,402,727	+		A4249_RS06915	0.32	-0.2
1,402,727	+		A4249_RS06915	0.32	+0.7
1,402,727	+		A4249_RS06915	0.32	+0.5
1,402,728	-		A4249_RS06915	0.32	-1.1
1,402,772	+		A4249_RS06915	0.39	-0.9
1,402,791	+		A4249_RS06915	0.43	-0.8
1,402,791	+		A4249_RS06915	0.43	+0.6
1,402,792	-		A4249_RS06915	0.43	-0.2
1,402,792	-		A4249_RS06915	0.43	-0.2
1,402,792	-		A4249_RS06915	0.43	+1.1
1,402,792	-		A4249_RS06915	0.43	+0.3
1,402,892	+		A4249_RS06915	0.60	-0.6
1,402,892	+		A4249_RS06915	0.60	+1.4
1,402,893	-		A4249_RS06915	0.60	-0.8
1,402,915	+		A4249_RS06915	0.64	+0.2
1,402,915	+		A4249_RS06915	0.64	+0.4
1,402,916	-		A4249_RS06915	0.64	-0.7
1,402,916	-		A4249_RS06915	0.64	+0.2
1,402,916	-		A4249_RS06915	0.64	-0.1
1,402,948	+		A4249_RS06915	0.69	+0.4
1,402,948	+		A4249_RS06915	0.69	-0.3
1,402,948	+		A4249_RS06915	0.69	-0.7
1,402,948	+		A4249_RS06915	0.69	+0.5
1,402,948	+		A4249_RS06915	0.69	+0.0
1,402,949	-		A4249_RS06915	0.69	-1.0
1,402,949	-		A4249_RS06915	0.69	+0.0
1,402,957	+		A4249_RS06915	0.71	-0.1
1,402,958	-		A4249_RS06915	0.71	-1.3
1,402,981	+		A4249_RS06915	0.75	+0.1
1,402,981	+		A4249_RS06915	0.75	+0.4
1,402,981	+		A4249_RS06915	0.75	-1.0
1,402,981	+		A4249_RS06915	0.75	+1.2
1,402,981	+		A4249_RS06915	0.75	+0.4
1,402,981	+		A4249_RS06915	0.75	-1.2
1,402,982	-		A4249_RS06915	0.75	-0.1
1,402,982	-		A4249_RS06915	0.75	+0.0
1,402,982	-		A4249_RS06915	0.75	-0.0
1,402,982	-		A4249_RS06915	0.75	+0.6
1,402,982	-		A4249_RS06915	0.75	-1.4
1,402,982	-		A4249_RS06915	0.75	-0.2
1,402,982	-		A4249_RS06915	0.75	-0.6
1,402,982	-		A4249_RS06915	0.75	-0.2
1,403,023	+		A4249_RS06915	0.82	+0.2
1,403,023	+		A4249_RS06915	0.82	-1.4
1,403,023	+		A4249_RS06915	0.82	+0.1
1,403,023	+		A4249_RS06915	0.82	+0.3
1,403,023	+		A4249_RS06915	0.82	-0.3
1,403,023	+		A4249_RS06915	0.82	-0.2
1,403,023	+		A4249_RS06915	0.82	+0.6
1,403,024	-		A4249_RS06915	0.82	-1.2
1,403,024	-		A4249_RS06915	0.82	-0.6
1,403,024	-		A4249_RS06915	0.82	+1.4
1,403,024	-		A4249_RS06915	0.82	-0.9
1,403,024	-		A4249_RS06915	0.82	+0.2
1,403,024	-		A4249_RS06915	0.82	-0.4
1,403,024	-		A4249_RS06915	0.82	-1.4
1,403,026	+		A4249_RS06915	0.82	-0.1
1,403,027	-		A4249_RS06915	0.83	+0.2
1,403,027	-		A4249_RS06915	0.83	-0.5
1,403,027	-		A4249_RS06915	0.83	-1.0
1,403,027	-		A4249_RS06915	0.83	-0.2
1,403,027	-		A4249_RS06915	0.83	-0.1
1,403,085	-				+0.2
1,403,099	+				-0.8
1,403,099	+				-0.1
1,403,099	+				+1.0
1,403,100	-				-0.5
1,403,100	-				+0.6
1,403,101	+				-0.8
1,403,101	+				-1.6
1,403,189	-		A4249_RS06920	0.14	+0.0
1,403,189	-		A4249_RS06920	0.14	+0.7
1,403,189	-		A4249_RS06920	0.14	+1.4
1,403,217	+		A4249_RS06920	0.26	+1.0
1,403,218	-		A4249_RS06920	0.27	-0.1
1,403,262	+		A4249_RS06920	0.45	-0.4
1,403,298	+		A4249_RS06920	0.60	-0.4
1,403,299	-		A4249_RS06920	0.61	-0.5
1,403,371	-				+0.3
1,403,371	-				-0.5
1,403,393	-				-1.2
1,403,423	+				+0.4
1,403,424	-				-0.8
1,403,466	+				+0.8
1,403,467	-				+0.2
1,403,480	+				-0.3
1,403,508	+				+0.3
1,403,508	+				+0.5
1,403,508	+				-0.7
1,403,508	+				+0.1
1,403,508	+				-0.2
1,403,508	+				-0.6
1,403,509	-				-0.7
1,403,509	-				+0.2
1,403,762	+				+0.5
1,403,762	+				-1.2
1,403,784	+				-0.4
1,403,785	-				-0.5
1,403,785	-				+0.1
1,404,038	-		A4249_RS06925	0.71	+0.2
1,404,065	+		A4249_RS06925	0.82	+0.4
1,404,066	-		A4249_RS06925	0.82	+0.1
1,404,077	+		A4249_RS06925	0.87	+0.1
1,404,077	+		A4249_RS06925	0.87	+0.3
1,404,077	+		A4249_RS06925	0.87	+1.0
1,404,077	+		A4249_RS06925	0.87	-0.0
1,404,077	+		A4249_RS06925	0.87	+1.1
1,404,077	+		A4249_RS06925	0.87	-1.1
1,404,077	+		A4249_RS06925	0.87	+0.4
1,404,077	+		A4249_RS06925	0.87	+0.0
1,404,077	+		A4249_RS06925	0.87	-0.8
1,404,077	+		A4249_RS06925	0.87	+0.6
1,404,077	+		A4249_RS06925	0.87	-0.4
1,404,077	+		A4249_RS06925	0.87	-0.7
1,404,077	+		A4249_RS06925	0.87	-0.1
1,404,077	+		A4249_RS06925	0.87	+0.0
1,404,077	+		A4249_RS06925	0.87	+0.9
1,404,077	+		A4249_RS06925	0.87	-0.5
1,404,078	-		A4249_RS06925	0.87	-1.1
1,404,078	-		A4249_RS06925	0.87	+0.5
1,404,078	-		A4249_RS06925	0.87	-0.1
1,404,078	-		A4249_RS06925	0.87	+0.3
1,404,078	-		A4249_RS06925	0.87	-0.8
1,404,078	-		A4249_RS06925	0.87	-0.3
1,404,078	-		A4249_RS06925	0.87	-1.2
1,404,078	-		A4249_RS06925	0.87	-1.7
1,404,078	-		A4249_RS06925	0.87	+1.0
1,404,078	-		A4249_RS06925	0.87	-0.6
1,404,078	-		A4249_RS06925	0.87	-0.2
1,404,116	+				+0.0
1,404,116	+				-0.2
1,404,116	+				+0.9
1,404,116	+				-0.3
1,404,116	+				-0.2
1,404,116	+				-0.3
1,404,116	+				+0.4
1,404,116	+				+0.9
1,404,116	+				-0.5
1,404,116	+				-0.5
1,404,117	-				+0.3
1,404,117	-				-1.2
1,404,117	-				+1.5
1,404,117	-				-1.0
1,404,117	-				+0.1
1,404,117	-				-2.1
1,404,117	-				-1.3
1,404,156	+				-0.2
1,404,156	+				+2.0
1,404,156	+				+0.9