Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS05995

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
1,220,046	+		A4249_RS05985	0.35	-0.7
1,220,046	+		A4249_RS05985	0.35	+0.1
1,220,047	-		A4249_RS05985	0.35	+0.1
1,220,047	-		A4249_RS05985	0.35	+1.6
1,220,047	-		A4249_RS05985	0.35	-0.3
1,220,154	+		A4249_RS05985	0.56	+0.7
1,220,154	+		A4249_RS05985	0.56	+1.0
1,220,154	+		A4249_RS05985	0.56	-0.7
1,220,154	+		A4249_RS05985	0.56	-0.1
1,220,154	+		A4249_RS05985	0.56	+0.6
1,220,154	+		A4249_RS05985	0.56	+0.7
1,220,154	+		A4249_RS05985	0.56	+1.3
1,220,155	-		A4249_RS05985	0.56	+1.6
1,220,155	-		A4249_RS05985	0.56	+1.0
1,220,155	-		A4249_RS05985	0.56	+0.2
1,220,155	-		A4249_RS05985	0.56	-0.7
1,220,155	-		A4249_RS05985	0.56	-2.2
1,220,155	-		A4249_RS05985	0.56	-1.2
1,220,155	-		A4249_RS05985	0.56	+0.4
1,220,155	-		A4249_RS05985	0.56	-0.3
1,220,155	-		A4249_RS05985	0.56	-0.7
1,220,155	-		A4249_RS05985	0.56	+0.2
1,220,155	-		A4249_RS05985	0.56	+0.3
1,220,155	-		A4249_RS05985	0.56	-0.3
1,220,245	-		A4249_RS05985	0.73	+1.2
1,220,245	-		A4249_RS05985	0.73	-0.3
1,220,292	+		A4249_RS05985	0.82	-1.0
1,220,292	+		A4249_RS05985	0.82	+1.2
1,220,292	+		A4249_RS05985	0.82	+0.4
1,220,293	-		A4249_RS05985	0.82	+2.6
1,220,293	-		A4249_RS05985	0.82	-0.1
1,220,293	-		A4249_RS05985	0.82	+0.0
1,220,293	-		A4249_RS05985	0.82	+0.6
1,220,293	-		A4249_RS05985	0.82	-0.9
1,220,331	+		A4249_RS05985	0.89	+0.2
1,220,332	-		A4249_RS05985	0.90	+1.8
1,220,955	+				-1.2
1,220,956	-				-0.4
1,221,015	+				-0.3
1,221,030	-				-0.3
1,221,030	-				-0.3
1,221,030	-				-0.6
1,221,034	+				-0.3
1,221,034	+				+1.1
1,221,125	+				+0.0
1,221,125	+				-1.9
1,221,125	+				+0.7
1,221,125	+				+0.1
1,221,125	+				-0.7
1,221,125	+				-0.5
1,221,125	+				-0.0
1,221,125	+				+0.2
1,221,125	+				+0.4
1,221,125	+				-0.6
1,221,125	+				-0.3
1,221,125	+				-0.6
1,221,125	+				-1.9
1,221,125	+				-0.5
1,221,125	+				-0.1
1,221,126	-				-0.1
1,221,126	-				-0.6
1,221,126	-				-0.5
1,221,126	-				-0.5
1,221,126	-				-0.5
1,221,126	-				+0.0
1,221,126	-				-0.0
1,221,126	-				+0.1
1,221,126	-				+0.5
1,221,126	-				+0.6
1,221,131	+				+0.1
1,221,131	+				+0.1
1,221,131	+				+0.3
1,221,131	+				-0.1
1,221,131	+				-1.4
1,221,132	-				-0.3
1,221,132	-				+0.9
1,221,132	-				+0.9
1,221,132	-				-0.5
1,221,132	-				+0.8
1,221,133	+				-0.5
1,221,133	+				+0.5
1,221,133	+				-0.5
1,221,134	-				+0.2
1,221,134	-				-1.5
1,221,134	-				-0.0
1,221,134	-				+0.0
1,221,134	-				+0.1
1,221,134	-				+0.2
1,221,134	-				-0.1
1,221,463	+		A4249_RS05995	0.20	-1.1
1,221,481	+		A4249_RS05995	0.21	+0.4
1,221,481	+		A4249_RS05995	0.21	+1.0
1,221,481	+		A4249_RS05995	0.21	-0.4
1,221,481	+		A4249_RS05995	0.21	-1.0
1,221,481	+		A4249_RS05995	0.21	-1.0
1,221,481	+		A4249_RS05995	0.21	-0.4
1,221,481	+		A4249_RS05995	0.21	-0.5
1,221,482	-		A4249_RS05995	0.21	-0.1
1,221,482	-		A4249_RS05995	0.21	+0.2
1,221,482	-		A4249_RS05995	0.21	+1.0
1,221,482	-		A4249_RS05995	0.21	-0.1
1,221,482	-		A4249_RS05995	0.21	-0.6
1,221,482	-		A4249_RS05995	0.21	-0.2
1,221,482	-		A4249_RS05995	0.21	+1.0
1,221,482	-		A4249_RS05995	0.21	-1.8
1,221,482	-		A4249_RS05995	0.21	+0.5
1,221,482	-		A4249_RS05995	0.21	+0.5
1,221,482	-		A4249_RS05995	0.21	-0.1
1,221,579	+		A4249_RS05995	0.25	-1.5
1,221,580	-		A4249_RS05995	0.25	-0.7
1,221,580	-		A4249_RS05995	0.25	-0.3
1,221,580	-		A4249_RS05995	0.25	-0.4
1,221,622	+		A4249_RS05995	0.27	-0.8
1,221,622	+		A4249_RS05995	0.27	-0.3
1,221,622	+		A4249_RS05995	0.27	-0.5
1,221,622	+		A4249_RS05995	0.27	-0.3
1,221,623	-		A4249_RS05995	0.27	-1.4
1,221,623	-		A4249_RS05995	0.27	+0.5
1,221,674	-		A4249_RS05995	0.30	+0.6
1,221,674	-		A4249_RS05995	0.30	-2.0
1,221,674	-		A4249_RS05995	0.30	-1.5
1,221,697	+		A4249_RS05995	0.31	+0.2
1,221,697	+		A4249_RS05995	0.31	-0.1
1,221,697	+		A4249_RS05995	0.31	-1.4
1,221,697	+		A4249_RS05995	0.31	+0.1
1,221,697	+		A4249_RS05995	0.31	-0.6
1,221,698	-		A4249_RS05995	0.31	+0.2
1,221,698	-		A4249_RS05995	0.31	+0.4
1,221,698	-		A4249_RS05995	0.31	-0.0
1,221,698	-		A4249_RS05995	0.31	+0.1
1,221,698	-		A4249_RS05995	0.31	-1.3
1,221,713	+		A4249_RS05995	0.32	-0.3
1,221,713	+		A4249_RS05995	0.32	-0.4
1,221,713	+		A4249_RS05995	0.32	+0.1
1,221,713	+		A4249_RS05995	0.32	-0.4
1,221,713	+		A4249_RS05995	0.32	-0.1
1,221,713	+		A4249_RS05995	0.32	-1.0
1,221,714	-		A4249_RS05995	0.32	-0.4
1,221,714	-		A4249_RS05995	0.32	-1.2
1,221,714	-		A4249_RS05995	0.32	+0.9
1,221,714	-		A4249_RS05995	0.32	-1.0
1,221,715	+		A4249_RS05995	0.32	+0.3
1,221,715	+		A4249_RS05995	0.32	+1.1
1,221,715	+		A4249_RS05995	0.32	+0.1
1,221,715	+		A4249_RS05995	0.32	-0.1
1,221,716	-		A4249_RS05995	0.32	+0.2
1,221,716	-		A4249_RS05995	0.32	-0.3
1,221,763	+		A4249_RS05995	0.34	+0.0
1,221,763	+		A4249_RS05995	0.34	-1.1
1,222,117	+		A4249_RS05995	0.50	-0.1
1,222,117	+		A4249_RS05995	0.50	-0.5
1,222,117	+		A4249_RS05995	0.50	+0.0
1,222,118	-		A4249_RS05995	0.51	+0.0
1,222,118	-		A4249_RS05995	0.51	-0.9
1,222,118	-		A4249_RS05995	0.51	+0.6
1,222,118	-		A4249_RS05995	0.51	-1.1
1,222,118	-		A4249_RS05995	0.51	-0.7
1,222,118	-		A4249_RS05995	0.51	-1.7
1,222,118	-		A4249_RS05995	0.51	+0.3
1,222,118	-		A4249_RS05995	0.51	+1.0
1,222,118	-		A4249_RS05995	0.51	+0.1
1,222,120	+		A4249_RS05995	0.51	-1.0
1,222,120	+		A4249_RS05995	0.51	-0.3
1,222,120	+		A4249_RS05995	0.51	-1.0
1,222,120	+		A4249_RS05995	0.51	-0.7
1,222,121	-		A4249_RS05995	0.51	+0.5
1,222,121	-		A4249_RS05995	0.51	-0.6
1,222,121	-		A4249_RS05995	0.51	-0.2
1,222,121	-		A4249_RS05995	0.51	+0.5
1,222,286	+		A4249_RS05995	0.58	-2.0
1,222,287	-		A4249_RS05995	0.58	-0.5
1,222,297	+		A4249_RS05995	0.59	-0.0
1,222,297	+		A4249_RS05995	0.59	+0.7
1,222,297	+		A4249_RS05995	0.59	-0.6
1,222,298	-		A4249_RS05995	0.59	-1.1
1,222,298	-		A4249_RS05995	0.59	-1.0
1,222,298	-		A4249_RS05995	0.59	+0.3
1,222,298	-		A4249_RS05995	0.59	-0.5
1,222,298	-		A4249_RS05995	0.59	+0.8
1,222,298	-		A4249_RS05995	0.59	+1.3
1,222,414	+		A4249_RS05995	0.64	+0.1
1,222,414	+		A4249_RS05995	0.64	-1.6
1,222,414	+		A4249_RS05995	0.64	-1.3
1,222,414	+		A4249_RS05995	0.64	-0.6
1,222,414	+		A4249_RS05995	0.64	-0.6
1,222,415	-		A4249_RS05995	0.64	-0.4
1,222,415	-		A4249_RS05995	0.64	-0.3
1,222,415	-		A4249_RS05995	0.64	+0.4
1,222,474	+		A4249_RS05995	0.67	+0.6
1,222,474	+		A4249_RS05995	0.67	+0.6
1,222,474	+		A4249_RS05995	0.67	+2.3
1,222,474	+		A4249_RS05995	0.67	-0.3
1,222,474	+		A4249_RS05995	0.67	+1.1
1,222,475	-		A4249_RS05995	0.67	+0.6
1,222,475	-		A4249_RS05995	0.67	-0.0
1,222,475	-		A4249_RS05995	0.67	+0.4
1,222,475	-		A4249_RS05995	0.67	+0.5
1,222,475	-		A4249_RS05995	0.67	-0.2
1,222,475	-		A4249_RS05995	0.67	-0.4
1,222,475	-		A4249_RS05995	0.67	+0.8
1,222,475	-		A4249_RS05995	0.67	+1.2
1,222,475	-		A4249_RS05995	0.67	+0.8
1,222,574	+		A4249_RS05995	0.72	-0.3
1,222,750	+		A4249_RS05995	0.80	-1.5
1,222,750	+		A4249_RS05995	0.80	+0.2
1,222,750	+		A4249_RS05995	0.80	-1.1
1,222,750	+		A4249_RS05995	0.80	-0.8
1,222,750	+		A4249_RS05995	0.80	-0.4
1,222,750	+		A4249_RS05995	0.80	-0.2
1,222,750	+		A4249_RS05995	0.80	+0.8
1,222,750	+		A4249_RS05995	0.80	-1.0
1,222,750	+		A4249_RS05995	0.80	-0.7
1,222,750	+		A4249_RS05995	0.80	+0.1
1,222,750	+		A4249_RS05995	0.80	-0.3
1,222,750	+		A4249_RS05995	0.80	+0.6
1,222,750	+		A4249_RS05995	0.80	-1.2
1,222,750	+		A4249_RS05995	0.80	-0.1
1,222,750	+		A4249_RS05995	0.80	+0.5
1,222,750	+		A4249_RS05995	0.80	+0.2
1,222,750	+		A4249_RS05995	0.80	-0.2
1,222,750	+		A4249_RS05995	0.80	-0.4
1,222,751	-		A4249_RS05995	0.80	+2.5
1,222,751	-		A4249_RS05995	0.80	+0.7
1,222,751	-		A4249_RS05995	0.80	-0.3
1,222,751	-		A4249_RS05995	0.80	+0.2
1,222,751	-		A4249_RS05995	0.80	+0.2
1,222,751	-		A4249_RS05995	0.80	-0.9
1,222,751	-		A4249_RS05995	0.80	+1.2
1,222,751	-		A4249_RS05995	0.80	-1.0
1,222,751	-		A4249_RS05995	0.80	-0.5
1,222,751	-		A4249_RS05995	0.80	-0.6
1,222,751	-		A4249_RS05995	0.80	+0.7
1,222,751	-		A4249_RS05995	0.80	+1.0
1,222,751	-		A4249_RS05995	0.80	+0.5
1,222,751	-		A4249_RS05995	0.80	-0.5
1,222,751	-		A4249_RS05995	0.80	+0.0
1,222,753	+		A4249_RS05995	0.80	-0.1
1,222,754	-		A4249_RS05995	0.80	+0.1
1,222,920	+		A4249_RS05995	0.88	-0.5
1,222,920	+		A4249_RS05995	0.88	+0.6
1,222,921	-		A4249_RS05995	0.88	-1.0
1,222,921	-		A4249_RS05995	0.88	-1.0
1,222,921	-		A4249_RS05995	0.88	-1.4
1,222,921	-		A4249_RS05995	0.88	+1.1
1,222,921	-		A4249_RS05995	0.88	+0.9
1,222,954	+		A4249_RS05995	0.89	+0.9
1,222,955	-		A4249_RS05995	0.89	+2.0
1,222,955	-		A4249_RS05995	0.89	-0.1
1,222,955	-		A4249_RS05995	0.89	+0.6
1,222,972	+				+0.2
1,222,973	-				+0.7
1,222,973	-				-1.8
1,223,017	+				-0.0
1,223,017	+				-0.7
1,223,017	+				-0.5
1,223,017	+				+0.6
1,223,018	-				+1.6
1,223,018	-				+0.1
1,223,128	+				+0.2
1,223,128	+				-1.2
1,223,128	+				-1.5
1,223,129	-				-0.4
1,223,129	-				+0.7
1,223,165	+				+1.8
1,223,165	+				+0.2
1,223,165	+				-1.8
1,223,165	+				-0.2
1,223,165	+				+0.3
1,223,165	+				-0.7
1,223,165	+				-0.0
1,223,165	+				-0.9
1,223,165	+				-0.7
1,223,165	+				-0.0
1,223,165	+				+0.3
1,223,165	+				-0.1
1,223,165	+				-1.2
1,223,166	-				-1.0
1,223,166	-				-0.4
1,223,166	-				-0.3
1,223,166	-				-2.0
1,223,166	-				-1.2
1,223,166	-				-1.0
1,223,166	-				+0.1
1,223,166	-				-2.6
1,223,166	-				+0.5
1,223,188	+				+0.6
1,223,513	+		A4249_RS06000	0.36	-0.0
1,223,513	+		A4249_RS06000	0.36	-1.0
1,223,514	-		A4249_RS06000	0.36	+0.5
1,223,629	+		A4249_RS06000	0.63	+0.8
1,223,629	+		A4249_RS06000	0.63	-1.0
1,223,629	+		A4249_RS06000	0.63	+0.6
1,223,629	+		A4249_RS06000	0.63	-1.5
1,223,629	+		A4249_RS06000	0.63	+0.2
1,223,629	+		A4249_RS06000	0.63	-1.0
1,223,629	+		A4249_RS06000	0.63	-1.2
1,223,629	+		A4249_RS06000	0.63	-0.2
1,223,629	+		A4249_RS06000	0.63	-1.4
1,223,629	+		A4249_RS06000	0.63	-0.0
1,223,629	+		A4249_RS06000	0.63	-0.3
1,223,629	+		A4249_RS06000	0.63	+0.0
1,223,629	+		A4249_RS06000	0.63	-0.8
1,223,629	+		A4249_RS06000	0.63	-0.7
1,223,630	-		A4249_RS06000	0.63	-0.9
1,223,630	-		A4249_RS06000	0.63	-0.5
1,223,630	-		A4249_RS06000	0.63	+1.3
1,223,630	-		A4249_RS06000	0.63	-0.8
1,223,630	-		A4249_RS06000	0.63	-0.5
1,223,780	+				+1.0
1,223,780	+				-0.5
1,223,780	+				-2.0
1,223,780	+				-1.0
1,223,780	+				+0.4
1,223,780	+				+0.5
1,223,780	+				-0.3
1,223,780	+				+1.5
1,223,780	+				+1.7
1,223,781	-				-0.7
1,223,781	-				-0.3
1,223,781	-				-0.3
1,223,781	-				-0.4
1,223,781	-				-0.7
1,223,814	+				-0.8
1,223,815	-				-0.3
1,223,815	-				+0.6