Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS05445

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
1,112,281	+				-0.1
1,112,460	+		A4249_RS05440	0.13	+1.3
1,112,460	+		A4249_RS05440	0.13	+0.1
1,112,460	+		A4249_RS05440	0.13	+0.1
1,112,460	+		A4249_RS05440	0.13	-0.9
1,112,460	+		A4249_RS05440	0.13	-0.4
1,112,460	+		A4249_RS05440	0.13	+0.4
1,112,460	+		A4249_RS05440	0.13	-0.4
1,112,460	+		A4249_RS05440	0.13	-0.7
1,112,460	+		A4249_RS05440	0.13	-0.4
1,112,461	-		A4249_RS05440	0.13	-1.0
1,112,461	-		A4249_RS05440	0.13	-0.9
1,112,461	-		A4249_RS05440	0.13	-0.2
1,112,461	-		A4249_RS05440	0.13	+0.0
1,112,461	-		A4249_RS05440	0.13	+0.9
1,112,461	-		A4249_RS05440	0.13	+0.1
1,112,461	-		A4249_RS05440	0.13	+1.2
1,112,461	-		A4249_RS05440	0.13	-0.6
1,112,461	-		A4249_RS05440	0.13	+0.2
1,112,461	-		A4249_RS05440	0.13	+1.4
1,112,498	+		A4249_RS05440	0.17	+0.7
1,112,498	+		A4249_RS05440	0.17	+0.2
1,112,498	+		A4249_RS05440	0.17	-0.6
1,112,499	-		A4249_RS05440	0.17	-0.8
1,112,568	+		A4249_RS05440	0.25	+1.1
1,112,613	-		A4249_RS05440	0.30	-0.5
1,112,613	-		A4249_RS05440	0.30	-0.6
1,112,613	-		A4249_RS05440	0.30	+1.2
1,112,613	-		A4249_RS05440	0.30	-0.6
1,112,632	+		A4249_RS05440	0.32	-1.0
1,112,632	+		A4249_RS05440	0.32	+0.1
1,112,632	+		A4249_RS05440	0.32	-0.7
1,112,632	+		A4249_RS05440	0.32	+1.0
1,112,633	-		A4249_RS05440	0.32	+0.8
1,112,633	-		A4249_RS05440	0.32	+0.4
1,112,633	-		A4249_RS05440	0.32	+1.2
1,112,633	-		A4249_RS05440	0.32	+0.2
1,112,642	+		A4249_RS05440	0.33	+0.8
1,112,642	+		A4249_RS05440	0.33	+0.7
1,112,643	-		A4249_RS05440	0.33	-0.0
1,112,643	-		A4249_RS05440	0.33	-0.3
1,112,643	-		A4249_RS05440	0.33	-1.2
1,112,643	-		A4249_RS05440	0.33	-0.3
1,112,643	-		A4249_RS05440	0.33	-0.4
1,112,643	-		A4249_RS05440	0.33	+0.9
1,112,643	-		A4249_RS05440	0.33	-0.3
1,112,675	+		A4249_RS05440	0.37	+0.3
1,112,675	+		A4249_RS05440	0.37	-0.4
1,112,675	+		A4249_RS05440	0.37	-0.9
1,112,675	+		A4249_RS05440	0.37	-1.0
1,112,675	+		A4249_RS05440	0.37	+1.2
1,112,675	+		A4249_RS05440	0.37	+0.2
1,112,676	-		A4249_RS05440	0.37	-0.6
1,112,676	-		A4249_RS05440	0.37	-0.9
1,112,676	-		A4249_RS05440	0.37	-0.5
1,112,676	-		A4249_RS05440	0.37	+0.6
1,112,676	-		A4249_RS05440	0.37	-0.3
1,112,830	-		A4249_RS05440	0.54	+0.1
1,112,831	+		A4249_RS05440	0.54	-0.9
1,112,832	-		A4249_RS05440	0.54	+0.2
1,112,832	-		A4249_RS05440	0.54	+0.6
1,112,832	-		A4249_RS05440	0.54	-0.2
1,112,832	-		A4249_RS05440	0.54	+0.2
1,113,014	+		A4249_RS05440	0.74	-1.0
1,113,014	+		A4249_RS05440	0.74	+1.4
1,113,143	+		A4249_RS05440	0.88	-1.5
1,113,143	+		A4249_RS05440	0.88	+1.0
1,113,143	+		A4249_RS05440	0.88	-0.4
1,113,144	-		A4249_RS05440	0.88	-0.9
1,113,194	+				-0.4
1,113,194	+				+0.7
1,113,194	+				+0.1
1,113,194	+				-0.9
1,113,195	-				-0.8
1,113,195	-				-0.1
1,113,195	-				-0.0
1,113,265	-				+0.2
1,113,265	-				-0.1
1,113,265	-				+1.0
1,113,419	+		A4249_RS05445	0.11	+2.2
1,113,419	+		A4249_RS05445	0.11	-1.1
1,113,419	+		A4249_RS05445	0.11	+0.9
1,113,420	-		A4249_RS05445	0.11	+0.8
1,113,420	-		A4249_RS05445	0.11	+0.2
1,113,526	+		A4249_RS05445	0.19	+0.2
1,113,697	-		A4249_RS05445	0.32	+0.2
1,113,697	-		A4249_RS05445	0.32	-1.6
1,113,697	-		A4249_RS05445	0.32	-1.0
1,113,717	+		A4249_RS05445	0.34	-1.1
1,113,717	+		A4249_RS05445	0.34	+1.0
1,113,717	+		A4249_RS05445	0.34	+0.5
1,113,717	+		A4249_RS05445	0.34	-1.5
1,113,717	+		A4249_RS05445	0.34	-0.4
1,113,717	+		A4249_RS05445	0.34	-0.9
1,113,717	+		A4249_RS05445	0.34	+0.7
1,113,717	+		A4249_RS05445	0.34	-0.6
1,113,717	+		A4249_RS05445	0.34	-0.6
1,113,717	+		A4249_RS05445	0.34	+0.2
1,113,717	+		A4249_RS05445	0.34	-0.9
1,113,717	+		A4249_RS05445	0.34	-0.7
1,113,717	+		A4249_RS05445	0.34	+0.7
1,113,717	+		A4249_RS05445	0.34	+0.1
1,113,717	+		A4249_RS05445	0.34	+1.8
1,113,717	+		A4249_RS05445	0.34	-0.8
1,113,717	+		A4249_RS05445	0.34	+0.5
1,113,717	+		A4249_RS05445	0.34	-1.3
1,113,717	+		A4249_RS05445	0.34	-1.0
1,113,718	-		A4249_RS05445	0.34	+0.6
1,113,718	-		A4249_RS05445	0.34	-0.0
1,113,718	-		A4249_RS05445	0.34	-0.2
1,113,718	-		A4249_RS05445	0.34	+1.3
1,113,718	-		A4249_RS05445	0.34	+0.4
1,113,718	-		A4249_RS05445	0.34	-0.2
1,113,718	-		A4249_RS05445	0.34	+2.0
1,113,718	-		A4249_RS05445	0.34	-0.0
1,113,718	-		A4249_RS05445	0.34	-1.4
1,113,718	-		A4249_RS05445	0.34	-0.3
1,113,718	-		A4249_RS05445	0.34	+1.3
1,113,718	-		A4249_RS05445	0.34	-2.1
1,113,718	-		A4249_RS05445	0.34	+0.1
1,113,719	+		A4249_RS05445	0.34	+0.6
1,113,719	+		A4249_RS05445	0.34	-0.1
1,113,719	+		A4249_RS05445	0.34	+0.1
1,113,719	+		A4249_RS05445	0.34	+0.3
1,113,719	+		A4249_RS05445	0.34	-1.8
1,113,719	+		A4249_RS05445	0.34	-0.9
1,113,720	-		A4249_RS05445	0.34	-1.1
1,113,720	-		A4249_RS05445	0.34	-1.1
1,113,720	-		A4249_RS05445	0.34	-0.1
1,113,720	-		A4249_RS05445	0.34	+1.3
1,113,720	-		A4249_RS05445	0.34	+0.6
1,113,720	-		A4249_RS05445	0.34	-1.0
1,113,720	-		A4249_RS05445	0.34	+0.2
1,113,720	-		A4249_RS05445	0.34	+0.2
1,113,986	+		A4249_RS05445	0.54	+0.5
1,113,986	+		A4249_RS05445	0.54	-2.0
1,113,986	+		A4249_RS05445	0.54	+0.3
1,113,987	-		A4249_RS05445	0.54	-0.2
1,114,142	+		A4249_RS05445	0.66	+0.5
1,114,142	+		A4249_RS05445	0.66	-0.0
1,114,142	+		A4249_RS05445	0.66	-0.3
1,114,142	+		A4249_RS05445	0.66	+1.2
1,114,143	-		A4249_RS05445	0.66	-1.4
1,114,143	-		A4249_RS05445	0.66	-2.3
1,114,143	-		A4249_RS05445	0.66	-0.1
1,114,143	-		A4249_RS05445	0.66	-0.4
1,114,143	-		A4249_RS05445	0.66	-0.1
1,114,143	-		A4249_RS05445	0.66	+1.2
1,114,181	+		A4249_RS05445	0.69	+0.2
1,114,181	+		A4249_RS05445	0.69	+0.4
1,114,182	-		A4249_RS05445	0.69	-2.3
1,114,332	-		A4249_RS05445	0.81	-0.3
1,114,385	+		A4249_RS05445	0.85	+0.6
1,114,385	+		A4249_RS05445	0.85	-0.7
1,114,385	+		A4249_RS05445	0.85	+0.5
1,114,386	-		A4249_RS05445	0.85	+1.2
1,114,386	-		A4249_RS05445	0.85	+0.4
1,114,386	-		A4249_RS05445	0.85	-0.1
1,114,386	-		A4249_RS05445	0.85	+0.6
1,114,386	-		A4249_RS05445	0.85	-0.6
1,114,386	-		A4249_RS05445	0.85	+0.2
1,114,406	+		A4249_RS05445	0.86	+0.8
1,114,406	+		A4249_RS05445	0.86	-0.1
1,114,406	+		A4249_RS05445	0.86	-1.7
1,114,406	+		A4249_RS05445	0.86	-0.2
1,114,407	-		A4249_RS05445	0.86	+1.6
1,114,575	+				+1.2
1,114,575	+				+0.5
1,114,576	-				-0.6
1,114,576	-				+0.7
1,114,576	-				-0.1
1,114,576	-				+0.2
1,114,903	+		A4249_RS05450	0.18	-0.1
1,114,963	+		A4249_RS05450	0.27	-0.1
1,114,963	+		A4249_RS05450	0.27	-0.4
1,114,963	+		A4249_RS05450	0.27	-0.8
1,114,963	+		A4249_RS05450	0.27	-0.2
1,114,963	+		A4249_RS05450	0.27	-0.4
1,114,963	+		A4249_RS05450	0.27	-1.1
1,114,963	+		A4249_RS05450	0.27	-0.2
1,114,963	+		A4249_RS05450	0.27	-0.5
1,114,964	-		A4249_RS05450	0.27	-2.3
1,114,964	-		A4249_RS05450	0.27	+0.2
1,114,964	-		A4249_RS05450	0.27	+0.2
1,114,964	-		A4249_RS05450	0.27	+0.0
1,114,964	-		A4249_RS05450	0.27	-1.6
1,114,964	-		A4249_RS05450	0.27	-0.5
1,114,964	-		A4249_RS05450	0.27	-0.1
1,115,101	+		A4249_RS05450	0.49	+0.3
1,115,101	+		A4249_RS05450	0.49	-1.0
1,115,101	+		A4249_RS05450	0.49	-0.2
1,115,101	+		A4249_RS05450	0.49	-0.3
1,115,101	+		A4249_RS05450	0.49	-0.2
1,115,101	+		A4249_RS05450	0.49	-0.3
1,115,102	-		A4249_RS05450	0.49	-0.3
1,115,146	+		A4249_RS05450	0.56	-1.0
1,115,146	+		A4249_RS05450	0.56	-0.5
1,115,146	+		A4249_RS05450	0.56	-0.2
1,115,146	+		A4249_RS05450	0.56	-0.3
1,115,146	+		A4249_RS05450	0.56	+0.2
1,115,146	+		A4249_RS05450	0.56	+0.3
1,115,147	-		A4249_RS05450	0.56	-0.7
1,115,147	-		A4249_RS05450	0.56	-1.0
1,115,147	-		A4249_RS05450	0.56	-0.5
1,115,147	-		A4249_RS05450	0.56	-0.5
1,115,147	-		A4249_RS05450	0.56	-1.6
1,115,147	-		A4249_RS05450	0.56	+0.5
1,115,344	+		A4249_RS05450	0.88	+0.0
1,115,344	+		A4249_RS05450	0.88	+0.3
1,115,344	+		A4249_RS05450	0.88	-1.4
1,115,344	+		A4249_RS05450	0.88	-1.2
1,115,345	-		A4249_RS05450	0.88	-0.1
1,115,396	+				-0.4
1,115,397	-				-0.4
1,115,397	-				-0.4
1,115,397	-				+0.3
1,115,397	-				+0.3
1,115,426	+				-0.6
1,115,426	+				+0.5
1,115,426	+				+1.0
1,115,426	+				-0.8
1,115,427	-				+0.2
1,115,427	-				+2.6
1,115,520	+		A4249_RS05455	0.13	-0.9
1,115,520	+		A4249_RS05455	0.13	-1.6
1,115,520	+		A4249_RS05455	0.13	+1.0
1,115,520	+		A4249_RS05455	0.13	-0.7
1,115,520	+		A4249_RS05455	0.13	+0.2
1,115,520	+		A4249_RS05455	0.13	+1.2
1,115,520	+		A4249_RS05455	0.13	-0.1
1,115,520	+		A4249_RS05455	0.13	-0.7
1,115,520	+		A4249_RS05455	0.13	+0.9
1,115,520	+		A4249_RS05455	0.13	+1.0
1,115,520	+		A4249_RS05455	0.13	+0.3
1,115,520	+		A4249_RS05455	0.13	-0.1
1,115,521	-		A4249_RS05455	0.13	-1.5
1,115,521	-		A4249_RS05455	0.13	-0.4
1,115,521	-		A4249_RS05455	0.13	+0.5
1,115,521	-		A4249_RS05455	0.13	-0.1
1,115,521	-		A4249_RS05455	0.13	+0.4
1,115,521	-		A4249_RS05455	0.13	-0.1
1,115,521	-		A4249_RS05455	0.13	-0.8
1,115,521	-		A4249_RS05455	0.13	-0.8
1,115,521	-		A4249_RS05455	0.13	+0.5
1,115,521	-		A4249_RS05455	0.13	+0.2
1,115,521	-		A4249_RS05455	0.13	+0.1
1,115,521	-		A4249_RS05455	0.13	-0.3