Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS05250

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
1,080,895	+		A4249_RS05240	0.80	+0.5
1,080,895	+		A4249_RS05240	0.80	-0.3
1,080,895	+		A4249_RS05240	0.80	+1.5
1,080,896	-		A4249_RS05240	0.80	+0.2
1,080,898	-		A4249_RS05240	0.80	+0.5
1,081,122	+		A4249_RS05245	0.12	-0.5
1,081,123	-		A4249_RS05245	0.12	-0.1
1,081,162	+		A4249_RS05245	0.19	-0.4
1,081,162	+		A4249_RS05245	0.19	-0.4
1,081,162	+		A4249_RS05245	0.19	+0.9
1,081,162	+		A4249_RS05245	0.19	-1.2
1,081,162	+		A4249_RS05245	0.19	+0.1
1,081,162	+		A4249_RS05245	0.19	-1.2
1,081,162	+		A4249_RS05245	0.19	+0.7
1,081,162	+		A4249_RS05245	0.19	-0.3
1,081,163	-		A4249_RS05245	0.19	+0.0
1,081,163	-		A4249_RS05245	0.19	+0.5
1,081,163	-		A4249_RS05245	0.19	-1.2
1,081,163	-		A4249_RS05245	0.19	-0.2
1,081,163	-		A4249_RS05245	0.19	+0.4
1,081,163	-		A4249_RS05245	0.19	-0.6
1,081,163	-		A4249_RS05245	0.19	-0.2
1,081,163	-		A4249_RS05245	0.19	-0.8
1,081,163	-		A4249_RS05245	0.19	-1.0
1,081,163	-		A4249_RS05245	0.19	-0.3
1,081,163	-		A4249_RS05245	0.19	-0.5
1,081,163	-		A4249_RS05245	0.19	-1.9
1,081,163	-		A4249_RS05245	0.19	-0.0
1,081,163	-		A4249_RS05245	0.19	-1.4
1,081,163	-		A4249_RS05245	0.19	+0.5
1,081,237	+		A4249_RS05245	0.32	-0.5
1,081,261	+		A4249_RS05245	0.36	-1.6
1,081,350	-		A4249_RS05245	0.52	-1.6
1,081,350	-		A4249_RS05245	0.52	-0.3
1,081,602	+				-0.7
1,081,617	-				-0.2
1,081,617	-				-0.3
1,081,617	-				-1.7
1,081,617	-				-0.4
1,081,653	+				-1.0
1,081,654	-				+0.4
1,081,912	+				+0.1
1,081,912	+				-0.4
1,081,912	+				+1.7
1,081,912	+				+0.0
1,081,912	+				-0.1
1,081,912	+				+0.6
1,081,912	+				-1.6
1,081,912	+				-0.6
1,081,912	+				+0.1
1,081,912	+				-0.2
1,081,912	+				-0.1
1,081,912	+				-0.4
1,081,913	-				-0.7
1,081,913	-				-0.4
1,081,913	-				-0.2
1,081,913	-				+0.4
1,081,913	-				+1.1
1,082,008	+		A4249_RS05250	0.13	-1.1
1,082,008	+		A4249_RS05250	0.13	-1.2
1,082,008	+		A4249_RS05250	0.13	-0.8
1,082,009	-		A4249_RS05250	0.13	+0.0
1,082,009	-		A4249_RS05250	0.13	+0.4
1,082,009	-		A4249_RS05250	0.13	-1.7
1,082,009	-		A4249_RS05250	0.13	+0.5
1,082,095	+		A4249_RS05250	0.21	+0.3
1,082,095	+		A4249_RS05250	0.21	-1.9
1,082,095	+		A4249_RS05250	0.21	+0.1
1,082,096	-		A4249_RS05250	0.21	+0.8
1,082,096	-		A4249_RS05250	0.21	+0.1
1,082,317	+		A4249_RS05250	0.40	+0.1
1,082,317	+		A4249_RS05250	0.40	-0.2
1,082,317	+		A4249_RS05250	0.40	-0.6
1,082,317	+		A4249_RS05250	0.40	+0.6
1,082,317	+		A4249_RS05250	0.40	-1.1
1,082,317	+		A4249_RS05250	0.40	+0.1
1,082,317	+		A4249_RS05250	0.40	+1.3
1,082,317	+		A4249_RS05250	0.40	-0.3
1,082,317	+		A4249_RS05250	0.40	-0.0
1,082,317	+		A4249_RS05250	0.40	+0.0
1,082,317	+		A4249_RS05250	0.40	+1.4
1,082,317	+		A4249_RS05250	0.40	+0.5
1,082,317	+		A4249_RS05250	0.40	-0.3
1,082,317	+		A4249_RS05250	0.40	-0.4
1,082,317	+		A4249_RS05250	0.40	-1.3
1,082,318	-		A4249_RS05250	0.40	+0.3
1,082,318	-		A4249_RS05250	0.40	+0.6
1,082,318	-		A4249_RS05250	0.40	-0.1
1,082,406	+		A4249_RS05250	0.47	-0.7
1,082,406	+		A4249_RS05250	0.47	-0.4
1,082,407	-		A4249_RS05250	0.47	+0.1
1,082,585	-		A4249_RS05250	0.62	+0.2
1,082,599	+		A4249_RS05250	0.63	-1.3
1,082,599	+		A4249_RS05250	0.63	-0.1
1,082,599	+		A4249_RS05250	0.63	+0.5
1,082,599	+		A4249_RS05250	0.63	+0.2
1,082,599	+		A4249_RS05250	0.63	-0.4
1,082,599	+		A4249_RS05250	0.63	-0.1
1,082,599	+		A4249_RS05250	0.63	+0.9
1,082,600	-		A4249_RS05250	0.64	+0.1
1,082,600	-		A4249_RS05250	0.64	-1.2
1,082,600	-		A4249_RS05250	0.64	+0.3
1,082,600	-		A4249_RS05250	0.64	+0.0
1,082,600	-		A4249_RS05250	0.64	-0.6
1,082,600	-		A4249_RS05250	0.64	+0.1
1,082,600	-		A4249_RS05250	0.64	-1.3
1,082,671	+		A4249_RS05250	0.70	-1.2
1,082,671	+		A4249_RS05250	0.70	+0.6
1,082,672	-		A4249_RS05250	0.70	+0.7
1,082,672	-		A4249_RS05250	0.70	+0.1
1,082,892	-		A4249_RS05250	0.88	-0.0
1,082,896	+		A4249_RS05250	0.89	+0.4
1,082,896	+		A4249_RS05250	0.89	-0.2
1,082,896	+		A4249_RS05250	0.89	-0.6
1,082,897	-		A4249_RS05250	0.89	-0.2
1,082,897	-		A4249_RS05250	0.89	-0.3
1,082,933	+				+0.1
1,083,216	+		A4249_RS05255	0.30	-1.0
1,083,216	+		A4249_RS05255	0.30	-0.2
1,083,217	-		A4249_RS05255	0.30	+0.3
1,083,217	-		A4249_RS05255	0.30	-1.2
1,083,217	-		A4249_RS05255	0.30	+0.8
1,083,217	-		A4249_RS05255	0.30	-1.4
1,083,324	+		A4249_RS05255	0.49	-0.6
1,083,324	+		A4249_RS05255	0.49	-0.3
1,083,324	+		A4249_RS05255	0.49	+0.1
1,083,324	+		A4249_RS05255	0.49	-0.6
1,083,324	+		A4249_RS05255	0.49	+0.1
1,083,325	-		A4249_RS05255	0.49	-0.2
1,083,325	-		A4249_RS05255	0.49	-1.3
1,083,325	-		A4249_RS05255	0.49	+0.2
1,083,325	-		A4249_RS05255	0.49	-1.2
1,083,325	-		A4249_RS05255	0.49	-0.6
1,083,325	-		A4249_RS05255	0.49	+1.4
1,083,477	+		A4249_RS05255	0.76	+0.0
1,083,478	-		A4249_RS05255	0.76	+0.7
1,083,483	+		A4249_RS05255	0.77	-0.8
1,083,484	-		A4249_RS05255	0.77	-0.8
1,083,484	-		A4249_RS05255	0.77	+0.5
1,083,484	-		A4249_RS05255	0.77	+0.3
1,083,484	-		A4249_RS05255	0.77	-0.5
1,083,484	-		A4249_RS05255	0.77	-0.7
1,083,484	-		A4249_RS05255	0.77	+0.1
1,083,537	+		A4249_RS05255	0.86	-2.4
1,083,537	+		A4249_RS05255	0.86	-0.3
1,083,538	-		A4249_RS05255	0.87	-0.5
1,083,552	+		A4249_RS05255	0.89	-0.8
1,083,552	+		A4249_RS05255	0.89	-0.4
1,083,552	+		A4249_RS05255	0.89	+0.1
1,083,552	+		A4249_RS05255	0.89	+0.2
1,083,552	+		A4249_RS05255	0.89	+0.2
1,083,552	+		A4249_RS05255	0.89	-2.1
1,083,552	+		A4249_RS05255	0.89	+0.8
1,083,552	+		A4249_RS05255	0.89	+0.4
1,083,553	-		A4249_RS05255	0.89	-0.4
1,083,553	-		A4249_RS05255	0.89	-2.2
1,083,553	-		A4249_RS05255	0.89	+0.4
1,083,553	-		A4249_RS05255	0.89	+0.1
1,083,553	-		A4249_RS05255	0.89	+1.3
1,083,553	-		A4249_RS05255	0.89	-1.2
1,083,553	-		A4249_RS05255	0.89	-0.5
1,083,678	+				-0.9
1,083,775	+		A4249_RS05260	0.22	-0.3
1,083,775	+		A4249_RS05260	0.22	+1.6
1,083,775	+		A4249_RS05260	0.22	+0.5
1,083,775	+		A4249_RS05260	0.22	+1.3
1,083,775	+		A4249_RS05260	0.22	-1.2
1,083,775	+		A4249_RS05260	0.22	-0.8
1,083,775	+		A4249_RS05260	0.22	-1.1
1,083,775	+		A4249_RS05260	0.22	+0.1
1,083,775	+		A4249_RS05260	0.22	-0.0
1,083,775	+		A4249_RS05260	0.22	+0.7
1,083,776	-		A4249_RS05260	0.22	-1.5
1,083,776	-		A4249_RS05260	0.22	-0.3
1,083,776	-		A4249_RS05260	0.22	-0.4
1,083,776	-		A4249_RS05260	0.22	-0.2
1,083,776	-		A4249_RS05260	0.22	-0.4
1,083,776	-		A4249_RS05260	0.22	+0.6
1,083,776	-		A4249_RS05260	0.22	-0.2
1,083,776	-		A4249_RS05260	0.22	+0.0
1,083,776	-		A4249_RS05260	0.22	-0.6
1,083,776	-		A4249_RS05260	0.22	-0.8
1,083,888	+		A4249_RS05260	0.43	+0.2
1,083,888	+		A4249_RS05260	0.43	+0.3
1,083,889	-		A4249_RS05260	0.43	-0.1
1,083,889	-		A4249_RS05260	0.43	-1.4
1,083,889	-		A4249_RS05260	0.43	+0.4
1,083,936	+		A4249_RS05260	0.52	-1.4