Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS05240

Experiment: Cytidine 0.41115 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine 0.41115 mM (C)
1,079,275	+		A4249_RS05230	0.63	+0.3
1,079,275	+		A4249_RS05230	0.63	+0.4
1,079,275	+		A4249_RS05230	0.63	+0.0
1,079,275	+		A4249_RS05230	0.63	-1.1
1,079,275	+		A4249_RS05230	0.63	-0.2
1,079,275	+		A4249_RS05230	0.63	-0.6
1,079,275	+		A4249_RS05230	0.63	+0.2
1,079,276	-		A4249_RS05230	0.63	+0.3
1,079,276	-		A4249_RS05230	0.63	-1.4
1,079,278	+		A4249_RS05230	0.63	+0.8
1,079,278	+		A4249_RS05230	0.63	+0.8
1,079,278	+		A4249_RS05230	0.63	+0.0
1,079,439	-		A4249_RS05230	0.78	-0.7
1,079,581	+				+0.1
1,079,742	+		A4249_RS05235	0.13	+0.2
1,079,742	+		A4249_RS05235	0.13	+1.6
1,079,817	+		A4249_RS05235	0.26	-0.8
1,079,817	+		A4249_RS05235	0.26	-0.8
1,079,818	-		A4249_RS05235	0.26	+0.5
1,079,818	-		A4249_RS05235	0.26	-0.8
1,079,818	-		A4249_RS05235	0.26	-0.6
1,079,832	+		A4249_RS05235	0.29	+0.7
1,079,976	+		A4249_RS05235	0.55	-0.5
1,079,976	+		A4249_RS05235	0.55	-0.8
1,079,976	+		A4249_RS05235	0.55	+0.1
1,079,976	+		A4249_RS05235	0.55	+0.8
1,079,976	+		A4249_RS05235	0.55	-1.5
1,079,976	+		A4249_RS05235	0.55	-0.7
1,079,976	+		A4249_RS05235	0.55	-2.6
1,079,976	+		A4249_RS05235	0.55	-0.1
1,079,976	+		A4249_RS05235	0.55	+0.5
1,079,977	-		A4249_RS05235	0.55	-0.0
1,079,977	-		A4249_RS05235	0.55	+1.0
1,079,977	-		A4249_RS05235	0.55	-0.7
1,079,977	-		A4249_RS05235	0.55	-0.3
1,079,977	-		A4249_RS05235	0.55	-0.1
1,080,021	+		A4249_RS05235	0.63	-0.5
1,080,021	+		A4249_RS05235	0.63	-1.2
1,080,132	+		A4249_RS05235	0.82	+0.1
1,080,198	+				-0.5
1,080,198	+				+0.1
1,080,199	-				-0.1
1,080,203	+				+1.6
1,080,203	+				-0.3
1,080,203	+				+0.2
1,080,203	+				-0.7
1,080,203	+				+0.5
1,080,203	+				-0.6
1,080,203	+				+0.9
1,080,203	+				+0.1
1,080,203	+				+0.5
1,080,203	+				+0.2
1,080,203	+				+0.0
1,080,203	+				-0.7
1,080,203	+				-1.7
1,080,203	+				-0.0
1,080,204	-				+0.7
1,080,204	-				-0.0
1,080,204	-				-1.3
1,080,204	-				+0.2
1,080,277	-				+0.6
1,080,277	-				-0.4
1,080,377	+		A4249_RS05240	0.13	+0.8
1,080,377	+		A4249_RS05240	0.13	-0.8
1,080,377	+		A4249_RS05240	0.13	-0.5
1,080,377	+		A4249_RS05240	0.13	+1.1
1,080,377	+		A4249_RS05240	0.13	+0.1
1,080,377	+		A4249_RS05240	0.13	+1.2
1,080,378	-		A4249_RS05240	0.13	+0.5
1,080,378	-		A4249_RS05240	0.13	-0.4
1,080,378	-		A4249_RS05240	0.13	-1.4
1,080,378	-		A4249_RS05240	0.13	-0.9
1,080,378	-		A4249_RS05240	0.13	-0.2
1,080,378	-		A4249_RS05240	0.13	+0.4
1,080,378	-		A4249_RS05240	0.13	+0.5
1,080,378	-		A4249_RS05240	0.13	-0.9
1,080,438	+		A4249_RS05240	0.21	-0.9
1,080,438	+		A4249_RS05240	0.21	-0.6
1,080,574	+		A4249_RS05240	0.38	+0.1
1,080,575	-		A4249_RS05240	0.39	+0.7
1,080,579	+		A4249_RS05240	0.39	-0.1
1,080,579	+		A4249_RS05240	0.39	-0.0
1,080,579	+		A4249_RS05240	0.39	+0.4
1,080,579	+		A4249_RS05240	0.39	+0.3
1,080,579	+		A4249_RS05240	0.39	-0.4
1,080,579	+		A4249_RS05240	0.39	+0.1
1,080,579	+		A4249_RS05240	0.39	-0.4
1,080,579	+		A4249_RS05240	0.39	-1.3
1,080,579	+		A4249_RS05240	0.39	+0.5
1,080,579	+		A4249_RS05240	0.39	+0.0
1,080,579	+		A4249_RS05240	0.39	+0.0
1,080,579	+		A4249_RS05240	0.39	-0.7
1,080,579	+		A4249_RS05240	0.39	+0.2
1,080,579	+		A4249_RS05240	0.39	-0.2
1,080,579	+		A4249_RS05240	0.39	-0.2
1,080,579	+		A4249_RS05240	0.39	-0.3
1,080,579	+		A4249_RS05240	0.39	-0.9
1,080,580	-		A4249_RS05240	0.39	-1.3
1,080,580	-		A4249_RS05240	0.39	-2.0
1,080,580	-		A4249_RS05240	0.39	+0.6
1,080,580	-		A4249_RS05240	0.39	-0.7
1,080,580	-		A4249_RS05240	0.39	-0.9
1,080,580	-		A4249_RS05240	0.39	-0.9
1,080,580	-		A4249_RS05240	0.39	-0.8
1,080,609	+		A4249_RS05240	0.43	+1.1
1,080,609	+		A4249_RS05240	0.43	-0.4
1,080,609	+		A4249_RS05240	0.43	-0.2
1,080,609	+		A4249_RS05240	0.43	-1.2
1,080,609	+		A4249_RS05240	0.43	-0.9
1,080,610	-		A4249_RS05240	0.43	+0.6
1,080,610	-		A4249_RS05240	0.43	+0.3
1,080,610	-		A4249_RS05240	0.43	+0.7
1,080,610	-		A4249_RS05240	0.43	-0.8
1,080,645	+		A4249_RS05240	0.48	-0.2
1,080,646	-		A4249_RS05240	0.48	-0.4
1,080,646	-		A4249_RS05240	0.48	+0.1
1,080,646	-		A4249_RS05240	0.48	+0.8
1,080,647	+		A4249_RS05240	0.48	-0.2
1,080,647	+		A4249_RS05240	0.48	+0.2
1,080,647	+		A4249_RS05240	0.48	-0.4
1,080,647	+		A4249_RS05240	0.48	-0.1
1,080,647	+		A4249_RS05240	0.48	-1.9
1,080,647	+		A4249_RS05240	0.48	-0.4
1,080,648	-		A4249_RS05240	0.48	-0.4
1,080,648	-		A4249_RS05240	0.48	+0.0
1,080,648	-		A4249_RS05240	0.48	+0.3
1,080,691	+		A4249_RS05240	0.54	-0.1
1,080,691	+		A4249_RS05240	0.54	-0.9
1,080,691	+		A4249_RS05240	0.54	-1.2
1,080,691	+		A4249_RS05240	0.54	+1.1
1,080,691	+		A4249_RS05240	0.54	-0.4
1,080,691	+		A4249_RS05240	0.54	-1.8
1,080,691	+		A4249_RS05240	0.54	+0.7
1,080,691	+		A4249_RS05240	0.54	-1.2
1,080,691	+		A4249_RS05240	0.54	+0.4
1,080,691	+		A4249_RS05240	0.54	+0.3
1,080,692	-		A4249_RS05240	0.54	-1.7
1,080,692	-		A4249_RS05240	0.54	-0.4
1,080,692	-		A4249_RS05240	0.54	+0.3
1,080,692	-		A4249_RS05240	0.54	+1.4
1,080,692	-		A4249_RS05240	0.54	+0.2
1,080,692	-		A4249_RS05240	0.54	+0.3
1,080,692	-		A4249_RS05240	0.54	-0.4
1,080,692	-		A4249_RS05240	0.54	-0.3
1,080,693	+		A4249_RS05240	0.54	+1.7
1,080,693	+		A4249_RS05240	0.54	+0.5
1,080,693	+		A4249_RS05240	0.54	+0.7
1,080,694	-		A4249_RS05240	0.54	-0.7
1,080,727	+		A4249_RS05240	0.58	-1.3
1,080,735	+		A4249_RS05240	0.59	-0.3
1,080,735	+		A4249_RS05240	0.59	+0.2
1,080,735	+		A4249_RS05240	0.59	-1.2
1,080,736	-		A4249_RS05240	0.59	-0.8
1,080,736	-		A4249_RS05240	0.59	-0.2
1,080,736	-		A4249_RS05240	0.59	-0.2
1,080,736	-		A4249_RS05240	0.59	+0.6
1,080,736	-		A4249_RS05240	0.59	-0.1
1,080,775	+		A4249_RS05240	0.64	-1.4
1,080,775	+		A4249_RS05240	0.64	-0.4
1,080,776	-		A4249_RS05240	0.64	-0.3
1,080,776	-		A4249_RS05240	0.64	+0.2
1,080,776	-		A4249_RS05240	0.64	+1.6
1,080,777	+		A4249_RS05240	0.65	+0.2
1,080,777	+		A4249_RS05240	0.65	-1.8
1,080,777	+		A4249_RS05240	0.65	-0.1
1,080,777	+		A4249_RS05240	0.65	-0.6
1,080,778	-		A4249_RS05240	0.65	+0.8
1,080,778	-		A4249_RS05240	0.65	+0.3
1,080,778	-		A4249_RS05240	0.65	+0.8
1,080,778	-		A4249_RS05240	0.65	-0.0
1,080,895	+		A4249_RS05240	0.80	+0.5
1,080,895	+		A4249_RS05240	0.80	-0.3
1,080,895	+		A4249_RS05240	0.80	+1.5
1,080,896	-		A4249_RS05240	0.80	+0.2
1,080,898	-		A4249_RS05240	0.80	+0.5
1,081,122	+		A4249_RS05245	0.12	-0.5
1,081,123	-		A4249_RS05245	0.12	-0.1
1,081,162	+		A4249_RS05245	0.19	-0.4
1,081,162	+		A4249_RS05245	0.19	-0.4
1,081,162	+		A4249_RS05245	0.19	+0.9
1,081,162	+		A4249_RS05245	0.19	-1.2
1,081,162	+		A4249_RS05245	0.19	+0.1
1,081,162	+		A4249_RS05245	0.19	-1.2
1,081,162	+		A4249_RS05245	0.19	+0.7
1,081,162	+		A4249_RS05245	0.19	-0.3
1,081,163	-		A4249_RS05245	0.19	+0.0
1,081,163	-		A4249_RS05245	0.19	+0.5
1,081,163	-		A4249_RS05245	0.19	-1.2
1,081,163	-		A4249_RS05245	0.19	-0.2
1,081,163	-		A4249_RS05245	0.19	+0.4
1,081,163	-		A4249_RS05245	0.19	-0.6
1,081,163	-		A4249_RS05245	0.19	-0.2
1,081,163	-		A4249_RS05245	0.19	-0.8
1,081,163	-		A4249_RS05245	0.19	-1.0
1,081,163	-		A4249_RS05245	0.19	-0.3
1,081,163	-		A4249_RS05245	0.19	-0.5
1,081,163	-		A4249_RS05245	0.19	-1.9
1,081,163	-		A4249_RS05245	0.19	-0.0
1,081,163	-		A4249_RS05245	0.19	-1.4
1,081,163	-		A4249_RS05245	0.19	+0.5
1,081,237	+		A4249_RS05245	0.32	-0.5
1,081,261	+		A4249_RS05245	0.36	-1.6
1,081,350	-		A4249_RS05245	0.52	-1.6
1,081,350	-		A4249_RS05245	0.52	-0.3
1,081,602	+				-0.7
1,081,617	-				-0.2
1,081,617	-				-0.3
1,081,617	-				-1.7
1,081,617	-				-0.4
1,081,653	+				-1.0
1,081,654	-				+0.4
1,081,912	+				+0.1
1,081,912	+				-0.4
1,081,912	+				+1.7
1,081,912	+				+0.0
1,081,912	+				-0.1
1,081,912	+				+0.6
1,081,912	+				-1.6
1,081,912	+				-0.6
1,081,912	+				+0.1
1,081,912	+				-0.2
1,081,912	+				-0.1
1,081,912	+				-0.4
1,081,913	-				-0.7
1,081,913	-				-0.4
1,081,913	-				-0.2
1,081,913	-				+0.4
1,081,913	-				+1.1
1,082,008	+		A4249_RS05250	0.13	-1.1
1,082,008	+		A4249_RS05250	0.13	-1.2
1,082,008	+		A4249_RS05250	0.13	-0.8
1,082,009	-		A4249_RS05250	0.13	+0.0
1,082,009	-		A4249_RS05250	0.13	+0.4
1,082,009	-		A4249_RS05250	0.13	-1.7
1,082,009	-		A4249_RS05250	0.13	+0.5