Experiment: Cytidine 0.41115 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00810 and A4249_RS00815 are separated by 65 nucleotides A4249_RS00815 and A4249_RS00820 are separated by 26 nucleotides A4249_RS00820 and A4249_RS00825 are separated by 61 nucleotides
A4249_RS00810: A4249_RS00810 - glycosyltransferase family 4 protein, at 152,043 to 153,134
_RS00810
A4249_RS00815: A4249_RS00815 - tyrosine-protein phosphatase, at 153,200 to 153,742
_RS00815
A4249_RS00820: A4249_RS00820 - hypothetical protein, at 153,769 to 154,557
_RS00820
A4249_RS00825: A4249_RS00825 - cytochrome P450, at 154,619 to 156,022
_RS00825
Position (kb) 153
154 Strain fitness (log2 ratio) -2
-1
0
1
2 at 152.220 kb on + strand, within A4249_RS00810 at 152.221 kb on - strand, within A4249_RS00810 at 152.246 kb on + strand, within A4249_RS00810 at 152.247 kb on - strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.249 kb on - strand, within A4249_RS00810 at 152.249 kb on - strand, within A4249_RS00810 at 152.249 kb on - strand, within A4249_RS00810 at 152.767 kb on + strand, within A4249_RS00810 at 152.768 kb on - strand, within A4249_RS00810 at 152.830 kb on + strand, within A4249_RS00810 at 152.830 kb on + strand, within A4249_RS00810 at 152.831 kb on - strand, within A4249_RS00810 at 152.883 kb on + strand, within A4249_RS00810 at 152.883 kb on + strand, within A4249_RS00810 at 152.883 kb on + strand, within A4249_RS00810 at 152.883 kb on + strand, within A4249_RS00810 at 152.884 kb on - strand, within A4249_RS00810 at 152.884 kb on - strand, within A4249_RS00810 at 152.884 kb on - strand, within A4249_RS00810 at 152.936 kb on + strand, within A4249_RS00810 at 152.936 kb on + strand, within A4249_RS00810 at 152.936 kb on + strand, within A4249_RS00810 at 152.937 kb on - strand, within A4249_RS00810 at 152.937 kb on - strand, within A4249_RS00810 at 152.937 kb on - strand, within A4249_RS00810 at 152.937 kb on - strand, within A4249_RS00810 at 153.147 kb on + strand at 153.148 kb on - strand at 153.148 kb on - strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.168 kb on + strand at 153.168 kb on + strand at 153.168 kb on + strand at 153.169 kb on - strand at 153.169 kb on - strand at 153.169 kb on - strand at 153.201 kb on + strand at 153.201 kb on + strand at 153.201 kb on + strand at 153.201 kb on + strand at 153.201 kb on + strand at 153.201 kb on + strand at 153.201 kb on + strand at 153.202 kb on - strand at 153.202 kb on - strand at 153.202 kb on - strand at 153.202 kb on - strand at 153.202 kb on - strand at 153.202 kb on - strand at 153.258 kb on + strand, within A4249_RS00815 at 153.259 kb on - strand, within A4249_RS00815 at 153.351 kb on + strand, within A4249_RS00815 at 153.351 kb on + strand, within A4249_RS00815 at 153.352 kb on - strand, within A4249_RS00815 at 153.352 kb on - strand, within A4249_RS00815 at 153.352 kb on - strand, within A4249_RS00815 at 153.352 kb on - strand, within A4249_RS00815 at 153.352 kb on - strand, within A4249_RS00815 at 153.352 kb on - strand, within A4249_RS00815 at 153.537 kb on + strand, within A4249_RS00815 at 153.538 kb on - strand, within A4249_RS00815 at 153.642 kb on + strand, within A4249_RS00815 at 153.642 kb on + strand, within A4249_RS00815 at 153.643 kb on - strand, within A4249_RS00815 at 153.643 kb on - strand, within A4249_RS00815 at 153.699 kb on + strand at 153.699 kb on + strand at 153.699 kb on + strand at 153.700 kb on - strand at 153.700 kb on - strand at 153.700 kb on - strand at 153.700 kb on - strand at 153.700 kb on - strand at 153.700 kb on - strand at 153.789 kb on + strand at 153.789 kb on + strand at 153.803 kb on + strand at 153.803 kb on + strand at 153.844 kb on + strand at 153.844 kb on + strand at 153.844 kb on + strand at 153.844 kb on + strand at 153.844 kb on + strand at 153.844 kb on + strand at 153.844 kb on + strand at 153.844 kb on + strand at 153.845 kb on - strand at 153.845 kb on - strand at 153.845 kb on - strand at 153.845 kb on - strand at 153.845 kb on - strand at 153.845 kb on - strand at 153.845 kb on - strand at 154.049 kb on + strand, within A4249_RS00820 at 154.050 kb on - strand, within A4249_RS00820 at 154.050 kb on - strand, within A4249_RS00820 at 154.127 kb on + strand, within A4249_RS00820 at 154.127 kb on + strand, within A4249_RS00820 at 154.127 kb on + strand, within A4249_RS00820 at 154.128 kb on - strand, within A4249_RS00820 at 154.128 kb on - strand, within A4249_RS00820 at 154.128 kb on - strand, within A4249_RS00820 at 154.128 kb on - strand, within A4249_RS00820 at 154.128 kb on - strand, within A4249_RS00820 at 154.128 kb on - strand, within A4249_RS00820 at 154.155 kb on + strand, within A4249_RS00820 at 154.155 kb on + strand, within A4249_RS00820 at 154.155 kb on + strand, within A4249_RS00820 at 154.155 kb on + strand, within A4249_RS00820 at 154.155 kb on + strand, within A4249_RS00820 at 154.155 kb on + strand, within A4249_RS00820 at 154.156 kb on - strand, within A4249_RS00820 at 154.156 kb on - strand, within A4249_RS00820 at 154.178 kb on + strand, within A4249_RS00820 at 154.178 kb on + strand, within A4249_RS00820 at 154.178 kb on + strand, within A4249_RS00820 at 154.178 kb on + strand, within A4249_RS00820 at 154.178 kb on + strand, within A4249_RS00820 at 154.178 kb on + strand, within A4249_RS00820 at 154.178 kb on + strand, within A4249_RS00820 at 154.178 kb on + strand, within A4249_RS00820 at 154.178 kb on + strand, within A4249_RS00820 at 154.178 kb on + strand, within A4249_RS00820 at 154.178 kb on + strand, within A4249_RS00820 at 154.179 kb on - strand, within A4249_RS00820 at 154.179 kb on - strand, within A4249_RS00820 at 154.179 kb on - strand, within A4249_RS00820 at 154.179 kb on - strand, within A4249_RS00820 at 154.179 kb on - strand, within A4249_RS00820 at 154.179 kb on - strand, within A4249_RS00820 at 154.179 kb on - strand, within A4249_RS00820 at 154.179 kb on - strand, within A4249_RS00820 at 154.179 kb on - strand, within A4249_RS00820 at 154.179 kb on - strand, within A4249_RS00820 at 154.179 kb on - strand, within A4249_RS00820 at 154.179 kb on - strand, within A4249_RS00820 at 154.179 kb on - strand, within A4249_RS00820 at 154.179 kb on - strand, within A4249_RS00820 at 154.245 kb on - strand, within A4249_RS00820 at 154.322 kb on + strand, within A4249_RS00820 at 154.322 kb on + strand, within A4249_RS00820 at 154.322 kb on + strand, within A4249_RS00820 at 154.322 kb on + strand, within A4249_RS00820 at 154.323 kb on - strand, within A4249_RS00820 at 154.323 kb on - strand, within A4249_RS00820 at 154.323 kb on - strand, within A4249_RS00820 at 154.323 kb on - strand, within A4249_RS00820 at 154.323 kb on - strand, within A4249_RS00820 at 154.335 kb on + strand, within A4249_RS00820 at 154.336 kb on - strand, within A4249_RS00820 at 154.336 kb on - strand, within A4249_RS00820 at 154.336 kb on - strand, within A4249_RS00820 at 154.336 kb on - strand, within A4249_RS00820 at 154.336 kb on - strand, within A4249_RS00820 at 154.410 kb on - strand, within A4249_RS00820 at 154.530 kb on + strand at 154.530 kb on + strand at 154.531 kb on - strand at 154.531 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cytidine 0.41115 mM (C) remove 152,220 + A4249_RS00810 0.16 -0.5 152,221 - A4249_RS00810 0.16 -1.0 152,246 + A4249_RS00810 0.19 -0.3 152,247 - A4249_RS00810 0.19 +0.1 152,248 + A4249_RS00810 0.19 -0.5 152,248 + A4249_RS00810 0.19 -0.1 152,248 + A4249_RS00810 0.19 -0.2 152,248 + A4249_RS00810 0.19 -0.1 152,248 + A4249_RS00810 0.19 -1.1 152,248 + A4249_RS00810 0.19 -0.2 152,248 + A4249_RS00810 0.19 +0.4 152,248 + A4249_RS00810 0.19 +0.6 152,248 + A4249_RS00810 0.19 +0.2 152,248 + A4249_RS00810 0.19 +0.1 152,248 + A4249_RS00810 0.19 -0.8 152,248 + A4249_RS00810 0.19 -1.3 152,249 - A4249_RS00810 0.19 -0.6 152,249 - A4249_RS00810 0.19 +0.7 152,249 - A4249_RS00810 0.19 -0.3 152,767 + A4249_RS00810 0.66 -1.3 152,768 - A4249_RS00810 0.66 -1.3 152,830 + A4249_RS00810 0.72 +0.2 152,830 + A4249_RS00810 0.72 -0.7 152,831 - A4249_RS00810 0.72 +0.0 152,883 + A4249_RS00810 0.77 -0.2 152,883 + A4249_RS00810 0.77 +1.1 152,883 + A4249_RS00810 0.77 -0.0 152,883 + A4249_RS00810 0.77 -0.2 152,884 - A4249_RS00810 0.77 -1.5 152,884 - A4249_RS00810 0.77 -0.4 152,884 - A4249_RS00810 0.77 -2.1 152,936 + A4249_RS00810 0.82 -1.9 152,936 + A4249_RS00810 0.82 +0.4 152,936 + A4249_RS00810 0.82 -1.3 152,937 - A4249_RS00810 0.82 -1.5 152,937 - A4249_RS00810 0.82 -0.1 152,937 - A4249_RS00810 0.82 +0.5 152,937 - A4249_RS00810 0.82 +0.3 153,147 + +1.1 153,148 - -0.6 153,148 - +0.4 153,166 + -1.4 153,166 + +0.9 153,166 + +0.1 153,166 + +0.8 153,166 + -0.3 153,166 + -0.3 153,166 + +1.0 153,166 + -0.5 153,166 + +0.1 153,166 + -0.8 153,166 + -1.1 153,166 + -0.1 153,166 + -1.0 153,166 + -1.6 153,167 - +0.5 153,167 - +1.9 153,167 - +0.5 153,167 - +0.9 153,167 - -0.3 153,167 - -1.6 153,167 - +0.5 153,167 - -0.6 153,167 - -0.7 153,167 - +0.5 153,167 - +0.6 153,167 - +0.3 153,167 - +1.1 153,167 - +0.1 153,167 - -0.2 153,168 + -0.0 153,168 + -0.1 153,168 + +0.6 153,169 - +1.4 153,169 - -0.4 153,169 - -0.6 153,201 + -0.7 153,201 + +0.4 153,201 + +0.1 153,201 + +0.2 153,201 + +1.0 153,201 + -0.2 153,201 + -0.8 153,202 - -0.6 153,202 - -0.9 153,202 - -0.8 153,202 - +0.2 153,202 - +0.3 153,202 - +0.2 153,258 + A4249_RS00815 0.11 -0.5 153,259 - A4249_RS00815 0.11 +0.0 153,351 + A4249_RS00815 0.28 +0.2 153,351 + A4249_RS00815 0.28 +0.0 153,352 - A4249_RS00815 0.28 -1.7 153,352 - A4249_RS00815 0.28 -0.3 153,352 - A4249_RS00815 0.28 -0.6 153,352 - A4249_RS00815 0.28 +0.5 153,352 - A4249_RS00815 0.28 -0.7 153,352 - A4249_RS00815 0.28 +0.7 153,537 + A4249_RS00815 0.62 -0.6 153,538 - A4249_RS00815 0.62 +0.2 153,642 + A4249_RS00815 0.81 -0.3 153,642 + A4249_RS00815 0.81 +1.1 153,643 - A4249_RS00815 0.82 -1.0 153,643 - A4249_RS00815 0.82 +0.9 153,699 + -0.3 153,699 + -0.6 153,699 + +0.1 153,700 - -0.9 153,700 - -0.4 153,700 - +0.4 153,700 - -0.3 153,700 - -0.3 153,700 - +0.5 153,789 + +1.0 153,789 + -0.1 153,803 + -0.5 153,803 + +0.3 153,844 + -1.5 153,844 + -1.4 153,844 + +0.4 153,844 + +0.1 153,844 + -0.4 153,844 + -1.0 153,844 + -0.5 153,844 + -0.7 153,845 - -0.1 153,845 - -2.4 153,845 - -0.2 153,845 - -0.6 153,845 - -0.6 153,845 - +0.2 153,845 - -0.4 154,049 + A4249_RS00820 0.35 -0.6 154,050 - A4249_RS00820 0.36 -0.5 154,050 - A4249_RS00820 0.36 -0.7 154,127 + A4249_RS00820 0.45 -0.2 154,127 + A4249_RS00820 0.45 -0.9 154,127 + A4249_RS00820 0.45 -0.3 154,128 - A4249_RS00820 0.46 -1.1 154,128 - A4249_RS00820 0.46 +0.0 154,128 - A4249_RS00820 0.46 +1.2 154,128 - A4249_RS00820 0.46 +1.0 154,128 - A4249_RS00820 0.46 -0.2 154,128 - A4249_RS00820 0.46 -0.4 154,155 + A4249_RS00820 0.49 +0.4 154,155 + A4249_RS00820 0.49 +0.6 154,155 + A4249_RS00820 0.49 -0.6 154,155 + A4249_RS00820 0.49 -0.1 154,155 + A4249_RS00820 0.49 -0.4 154,155 + A4249_RS00820 0.49 +0.9 154,156 - A4249_RS00820 0.49 +0.9 154,156 - A4249_RS00820 0.49 -0.7 154,178 + A4249_RS00820 0.52 -0.5 154,178 + A4249_RS00820 0.52 -0.2 154,178 + A4249_RS00820 0.52 +0.6 154,178 + A4249_RS00820 0.52 -0.2 154,178 + A4249_RS00820 0.52 -0.6 154,178 + A4249_RS00820 0.52 +0.2 154,178 + A4249_RS00820 0.52 +0.0 154,178 + A4249_RS00820 0.52 -0.7 154,178 + A4249_RS00820 0.52 +1.0 154,178 + A4249_RS00820 0.52 +0.5 154,178 + A4249_RS00820 0.52 -1.3 154,179 - A4249_RS00820 0.52 +0.3 154,179 - A4249_RS00820 0.52 -0.0 154,179 - A4249_RS00820 0.52 +0.3 154,179 - A4249_RS00820 0.52 +0.1 154,179 - A4249_RS00820 0.52 +0.2 154,179 - A4249_RS00820 0.52 +0.6 154,179 - A4249_RS00820 0.52 +0.6 154,179 - A4249_RS00820 0.52 -0.5 154,179 - A4249_RS00820 0.52 +1.7 154,179 - A4249_RS00820 0.52 -1.4 154,179 - A4249_RS00820 0.52 -0.6 154,179 - A4249_RS00820 0.52 +1.0 154,179 - A4249_RS00820 0.52 -0.9 154,179 - A4249_RS00820 0.52 -0.1 154,245 - A4249_RS00820 0.60 -0.9 154,322 + A4249_RS00820 0.70 -0.3 154,322 + A4249_RS00820 0.70 -0.8 154,322 + A4249_RS00820 0.70 +0.1 154,322 + A4249_RS00820 0.70 -0.6 154,323 - A4249_RS00820 0.70 -0.9 154,323 - A4249_RS00820 0.70 +0.2 154,323 - A4249_RS00820 0.70 +0.8 154,323 - A4249_RS00820 0.70 -0.1 154,323 - A4249_RS00820 0.70 +0.1 154,335 + A4249_RS00820 0.72 +0.6 154,336 - A4249_RS00820 0.72 +0.9 154,336 - A4249_RS00820 0.72 +0.3 154,336 - A4249_RS00820 0.72 -0.7 154,336 - A4249_RS00820 0.72 +0.3 154,336 - A4249_RS00820 0.72 +0.3 154,410 - A4249_RS00820 0.81 -0.2 154,530 + -1.4 154,530 + +1.1 154,531 - +0.4 154,531 - -0.1
Or see this region's nucleotide sequence