Experiment: Cytidine 0.41115 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00680 and A4249_RS00685 are separated by 69 nucleotides A4249_RS00685 and A4249_RS00690 are separated by 124 nucleotides A4249_RS00690 and A4249_RS00695 are separated by 5 nucleotides A4249_RS00695 and A4249_RS00700 are separated by 147 nucleotides A4249_RS00700 and A4249_RS00705 are separated by 54 nucleotides
A4249_RS00680: A4249_RS00680 - thioredoxin-disulfide reductase, at 126,208 to 127,215
_RS00680
A4249_RS00685: A4249_RS00685 - hypothetical protein, at 127,285 to 127,575
_RS00685
A4249_RS00690: A4249_RS00690 - mitochondrial fission ELM1 family protein, at 127,700 to 128,680
_RS00690
A4249_RS00695: A4249_RS00695 - transcription elongation factor GreA, at 128,686 to 129,159
_RS00695
A4249_RS00700: A4249_RS00700 - hypothetical protein, at 129,307 to 129,507
_RS00700
A4249_RS00705: A4249_RS00705 - glutathione S-transferase, at 129,562 to 130,227
_RS00705
Position (kb) 127
128
129 Strain fitness (log2 ratio) -2
-1
0
1
2 at 127.222 kb on + strand at 127.223 kb on - strand at 127.254 kb on + strand at 127.254 kb on + strand at 127.255 kb on - strand at 127.255 kb on - strand at 127.255 kb on - strand at 127.255 kb on - strand at 127.255 kb on - strand at 127.365 kb on - strand, within A4249_RS00685 at 127.365 kb on - strand, within A4249_RS00685 at 127.365 kb on - strand, within A4249_RS00685 at 127.380 kb on - strand, within A4249_RS00685 at 127.380 kb on - strand, within A4249_RS00685 at 127.500 kb on + strand, within A4249_RS00685 at 127.500 kb on + strand, within A4249_RS00685 at 127.500 kb on + strand, within A4249_RS00685 at 127.500 kb on + strand, within A4249_RS00685 at 127.501 kb on - strand, within A4249_RS00685 at 127.501 kb on - strand, within A4249_RS00685 at 127.597 kb on + strand at 127.597 kb on + strand at 127.598 kb on - strand at 127.598 kb on - strand at 127.598 kb on - strand at 127.598 kb on - strand at 127.598 kb on - strand at 128.685 kb on - strand at 128.687 kb on + strand at 128.687 kb on + strand at 128.687 kb on + strand at 128.687 kb on + strand at 128.687 kb on + strand at 128.687 kb on + strand at 128.687 kb on + strand at 128.688 kb on - strand at 128.688 kb on - strand at 128.688 kb on - strand at 128.688 kb on - strand at 129.208 kb on + strand at 129.209 kb on - strand at 129.209 kb on - strand at 129.358 kb on + strand, within A4249_RS00700 at 129.358 kb on + strand, within A4249_RS00700 at 129.359 kb on - strand, within A4249_RS00700 at 129.359 kb on - strand, within A4249_RS00700 at 129.369 kb on - strand, within A4249_RS00700 at 129.369 kb on - strand, within A4249_RS00700 at 129.516 kb on - strand at 129.569 kb on + strand at 129.569 kb on + strand at 129.569 kb on + strand at 129.569 kb on + strand at 129.569 kb on + strand at 129.569 kb on + strand at 129.569 kb on + strand at 129.569 kb on + strand at 129.569 kb on + strand at 129.570 kb on - strand at 129.570 kb on - strand at 129.570 kb on - strand at 129.570 kb on - strand at 129.570 kb on - strand at 129.575 kb on + strand at 129.606 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cytidine 0.41115 mM (C) remove 127,222 + +1.2 127,223 - +0.7 127,254 + -0.4 127,254 + -0.2 127,255 - -1.3 127,255 - -0.3 127,255 - +0.7 127,255 - -1.5 127,255 - -0.4 127,365 - A4249_RS00685 0.27 -0.3 127,365 - A4249_RS00685 0.27 +0.9 127,365 - A4249_RS00685 0.27 -0.2 127,380 - A4249_RS00685 0.33 +0.1 127,380 - A4249_RS00685 0.33 +0.1 127,500 + A4249_RS00685 0.74 +0.8 127,500 + A4249_RS00685 0.74 -0.0 127,500 + A4249_RS00685 0.74 -0.1 127,500 + A4249_RS00685 0.74 -0.7 127,501 - A4249_RS00685 0.74 +0.9 127,501 - A4249_RS00685 0.74 +1.0 127,597 + +0.4 127,597 + -0.2 127,598 - -0.4 127,598 - -0.1 127,598 - +0.7 127,598 - +0.9 127,598 - +1.2 128,685 - -0.2 128,687 + -0.4 128,687 + -1.6 128,687 + +1.5 128,687 + +0.1 128,687 + +1.0 128,687 + +0.4 128,687 + +0.1 128,688 - +0.9 128,688 - -1.1 128,688 - -0.2 128,688 - +0.6 129,208 + -1.2 129,209 - -1.5 129,209 - -1.9 129,358 + A4249_RS00700 0.25 -0.2 129,358 + A4249_RS00700 0.25 -0.1 129,359 - A4249_RS00700 0.26 +0.1 129,359 - A4249_RS00700 0.26 -1.1 129,369 - A4249_RS00700 0.31 -0.6 129,369 - A4249_RS00700 0.31 -0.7 129,516 - -0.1 129,569 + -1.6 129,569 + -0.2 129,569 + -0.1 129,569 + +1.4 129,569 + -0.5 129,569 + +0.5 129,569 + -0.1 129,569 + +0.4 129,569 + -1.6 129,570 - -0.2 129,570 - +0.3 129,570 - +0.2 129,570 - +2.0 129,570 - +0.7 129,575 + -0.9 129,606 - +1.1
Or see this region's nucleotide sequence