Strain Fitness in Erwinia amylovora T8 around OLJFJH_17775

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
3,736,563	-				+0.1
3,737,461	-				-0.1
3,737,462	+				-0.2
3,737,544	+		OLJFJH_17775	0.14	+0.1
3,737,544	+		OLJFJH_17775	0.14	-1.9
3,737,544	+		OLJFJH_17775	0.14	-0.7
3,737,544	+		OLJFJH_17775	0.14	-2.8
3,737,545	-		OLJFJH_17775	0.15	-2.4
3,737,621	+		OLJFJH_17775	0.23	-3.6
3,737,621	+		OLJFJH_17775	0.23	-2.2
3,737,626	+		OLJFJH_17775	0.23	-2.0
3,737,626	+		OLJFJH_17775	0.23	-0.9
3,737,626	+		OLJFJH_17775	0.23	-1.3
3,737,626	+		OLJFJH_17775	0.23	-2.2
3,737,627	-		OLJFJH_17775	0.24	-1.1
3,737,627	-		OLJFJH_17775	0.24	-2.1
3,737,627	-		OLJFJH_17775	0.24	-2.6
3,737,627	-		OLJFJH_17775	0.24	-2.9
3,737,630	+		OLJFJH_17775	0.24	-1.6
3,737,631	-		OLJFJH_17775	0.24	-2.1
3,737,631	-		OLJFJH_17775	0.24	-2.2
3,737,809	+		OLJFJH_17775	0.44	-2.1
3,737,897	-		OLJFJH_17775	0.53	-1.6
3,737,897	-		OLJFJH_17775	0.53	-2.2
3,738,100	+		OLJFJH_17775	0.76	-2.1
3,738,101	-		OLJFJH_17775	0.76	-3.2
3,738,296	+				-1.2
3,738,296	+				-2.6
3,738,297	-				-1.2
3,738,297	-				-0.4
3,738,349	+				-0.2
3,738,349	+				-0.2
3,738,350	-				+1.7
3,738,432	-		OLJFJH_17780	0.14	-0.2
3,738,476	-		OLJFJH_17780	0.19	+0.9
3,738,667	+		OLJFJH_17780	0.40	+0.3
3,738,748	-		OLJFJH_17780	0.50	+1.4
3,738,894	+		OLJFJH_17780	0.66	+1.1
3,738,940	-		OLJFJH_17780	0.72	-0.6
3,738,962	+		OLJFJH_17780	0.74	+2.3
3,738,963	-		OLJFJH_17780	0.74	+1.8
3,739,004	+		OLJFJH_17780	0.79	-0.4
3,739,004	+		OLJFJH_17780	0.79	+0.2
3,739,005	-		OLJFJH_17780	0.79	-1.1
3,739,005	-		OLJFJH_17780	0.79	-0.5
3,739,028	-		OLJFJH_17780	0.82	+1.6
3,739,064	+		OLJFJH_17780	0.86	-0.8
3,739,064	+		OLJFJH_17780	0.86	+0.3
3,739,090	-		OLJFJH_17780	0.89	+1.7
3,739,114	+				-3.1
3,739,115	-				-0.1
3,739,115	-				+1.2
3,739,119	+				-2.0
3,739,131	+				-0.1
3,739,290	-		OLJFJH_17785	0.26	-0.4
3,739,290	-		OLJFJH_17785	0.26	-0.5
3,739,290	-		OLJFJH_17785	0.26	+0.2
3,739,290	-		OLJFJH_17785	0.26	-0.2
3,739,290	-		OLJFJH_17785	0.26	+1.7