Strain Fitness in Erwinia amylovora T8 around OLJFJH_16980

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
3,588,818	-		OLJFJH_16970	0.30	-2.5
3,588,839	-		OLJFJH_16970	0.35	-1.7
3,588,862	+		OLJFJH_16970	0.41	-1.2
3,589,173	-				-2.3
3,589,359	+				+0.4
3,589,459	-				-1.8
3,589,463	+				-1.1
3,589,464	-				-1.5
3,589,464	-				-0.2
3,589,467	+				-0.8
3,589,468	-				-1.7
3,589,509	+				-1.6
3,589,509	+				+0.0
3,589,509	+				-0.5
3,589,513	+				-0.9
3,589,513	+				-1.3
3,589,513	+				-0.5
3,589,514	-				-1.6
3,589,514	-				-2.0
3,589,546	-				-3.2
3,589,546	-				-2.2
3,589,550	+				-1.1
3,589,551	-				-3.1
3,589,612	+				+0.9
3,589,632	+				-0.0
3,589,691	+				-1.8
3,589,691	+				-3.6
3,589,692	-				-2.4
3,589,692	-				-2.0
3,589,693	+				-2.3
3,589,693	+				+0.6
3,589,693	+				-2.4
3,589,697	-				-1.8
3,589,725	+				-3.1
3,589,858	-		OLJFJH_16980	0.11	-2.5
3,589,891	+		OLJFJH_16980	0.14	-1.4
3,589,891	+		OLJFJH_16980	0.14	-2.3
3,589,892	-		OLJFJH_16980	0.14	-3.1
3,589,964	-		OLJFJH_16980	0.19	-1.8
3,589,978	+		OLJFJH_16980	0.20	-1.8
3,589,979	-		OLJFJH_16980	0.20	-3.1
3,589,979	-		OLJFJH_16980	0.20	-3.0
3,590,028	+		OLJFJH_16980	0.24	-1.5
3,590,069	+		OLJFJH_16980	0.27	-3.1
3,590,069	+		OLJFJH_16980	0.27	-2.5
3,590,069	+		OLJFJH_16980	0.27	-2.5
3,590,070	-		OLJFJH_16980	0.27	-2.1
3,590,152	+		OLJFJH_16980	0.34	-3.7
3,590,152	+		OLJFJH_16980	0.34	-2.4
3,590,152	+		OLJFJH_16980	0.34	-5.1
3,590,153	-		OLJFJH_16980	0.34	-2.3
3,590,218	-		OLJFJH_16980	0.39	-2.4
3,590,252	-		OLJFJH_16980	0.42	-3.9
3,590,316	+		OLJFJH_16980	0.47	-1.6
3,590,316	+		OLJFJH_16980	0.47	-3.0
3,590,316	+		OLJFJH_16980	0.47	-3.1
3,590,317	-		OLJFJH_16980	0.47	-2.2
3,590,317	-		OLJFJH_16980	0.47	-1.7
3,590,383	-		OLJFJH_16980	0.52	-2.4
3,590,432	+		OLJFJH_16980	0.56	-2.4
3,590,432	+		OLJFJH_16980	0.56	-0.0
3,590,436	+		OLJFJH_16980	0.56	-2.5
3,590,437	-		OLJFJH_16980	0.56	-0.2
3,590,538	+		OLJFJH_16980	0.64	-2.7
3,590,538	+		OLJFJH_16980	0.64	-2.3
3,590,539	-		OLJFJH_16980	0.64	-2.0
3,590,543	+		OLJFJH_16980	0.64	-3.0
3,590,544	-		OLJFJH_16980	0.64	-2.7
3,590,544	-		OLJFJH_16980	0.64	-4.5
3,590,544	-		OLJFJH_16980	0.64	-2.8
3,590,599	-		OLJFJH_16980	0.69	-2.5
3,590,642	-		OLJFJH_16980	0.72	-1.8
3,590,642	-		OLJFJH_16980	0.72	-2.9
3,590,643	+		OLJFJH_16980	0.72	-4.1
3,590,643	+		OLJFJH_16980	0.72	-2.2
3,590,644	-		OLJFJH_16980	0.72	-0.2
3,590,644	-		OLJFJH_16980	0.72	-3.0
3,590,650	+		OLJFJH_16980	0.73	-1.4
3,590,771	-		OLJFJH_16980	0.82	-3.0
3,590,797	-		OLJFJH_16980	0.84	-1.7
3,590,809	+		OLJFJH_16980	0.85	-1.3
3,590,850	+		OLJFJH_16980	0.88	-3.2
3,590,850	+		OLJFJH_16980	0.88	-2.4
3,590,850	+		OLJFJH_16980	0.88	+0.1
3,590,851	-		OLJFJH_16980	0.88	-2.7
3,590,953	+				-3.0
3,590,953	+				-2.1
3,590,954	-				-2.3
3,590,973	+				-2.4
3,591,364	+		OLJFJH_16985	0.36	-0.4
3,591,364	+		OLJFJH_16985	0.36	-0.9
3,591,364	+		OLJFJH_16985	0.36	-0.6
3,591,364	+		OLJFJH_16985	0.36	-1.4
3,591,364	+		OLJFJH_16985	0.36	-0.6
3,591,364	+		OLJFJH_16985	0.36	-0.8
3,591,365	-		OLJFJH_16985	0.36	+1.7
3,591,365	-		OLJFJH_16985	0.36	-0.7
3,591,607	-		OLJFJH_16985	0.66	+0.4
3,591,642	+		OLJFJH_16985	0.71	-2.2
3,591,643	-		OLJFJH_16985	0.71	-1.6
3,591,643	-		OLJFJH_16985	0.71	-0.2
3,591,643	-		OLJFJH_16985	0.71	-0.9
3,591,645	-		OLJFJH_16985	0.71	-1.3
3,591,661	+		OLJFJH_16985	0.73	+0.4
3,591,740	+		OLJFJH_16985	0.83	-0.3
3,591,741	-		OLJFJH_16985	0.83	+1.9
3,591,769	+		OLJFJH_16985	0.87	-0.4
3,591,769	+		OLJFJH_16985	0.87	-1.4