Strain Fitness in Erwinia amylovora T8 around OLJFJH_16575

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
3,499,408	+		OLJFJH_16565	0.34	+0.7
3,499,508	-		OLJFJH_16565	0.58	+0.2
3,499,526	-		OLJFJH_16565	0.62	+0.7
3,499,556	+		OLJFJH_16565	0.70	+0.1
3,499,556	+		OLJFJH_16565	0.70	-0.6
3,499,556	+		OLJFJH_16565	0.70	-0.2
3,499,556	+		OLJFJH_16565	0.70	-0.2
3,499,604	-		OLJFJH_16565	0.81	+0.2
3,499,836	+		OLJFJH_16570	0.39	-2.1
3,499,836	+		OLJFJH_16570	0.39	+0.1
3,499,837	-		OLJFJH_16570	0.39	+0.3
3,500,222	+				+0.5
3,500,223	-				+2.5
3,500,232	+				+0.1
3,500,244	-				-1.4
3,500,313	+				+0.4
3,500,379	+				+0.6
3,500,379	+				+0.0
3,500,387	-				-0.1
3,500,387	-				+0.8
3,500,387	-				-2.6
3,500,387	-				-1.8
3,500,434	-				-0.2
3,500,434	-				-3.7
3,500,531	+		OLJFJH_16575	0.19	-1.0
3,500,531	+		OLJFJH_16575	0.19	+0.4
3,500,531	+		OLJFJH_16575	0.19	-2.2
3,500,531	+		OLJFJH_16575	0.19	-1.2
3,500,532	-		OLJFJH_16575	0.19	-0.4
3,500,538	+		OLJFJH_16575	0.20	-0.5
3,500,538	+		OLJFJH_16575	0.20	-1.2
3,500,538	+		OLJFJH_16575	0.20	-2.2
3,500,613	+		OLJFJH_16575	0.30	-0.2
3,500,633	+		OLJFJH_16575	0.33	-1.2
3,500,633	+		OLJFJH_16575	0.33	-2.3
3,500,634	-		OLJFJH_16575	0.33	-0.7
3,500,711	+		OLJFJH_16575	0.44	-0.1
3,500,734	-		OLJFJH_16575	0.47	-1.4
3,500,836	+		OLJFJH_16575	0.61	-1.8
3,500,837	-		OLJFJH_16575	0.61	-2.4
3,500,866	-		OLJFJH_16575	0.65	-1.1
3,501,024	+		OLJFJH_16575	0.86	-3.4
3,501,034	+		OLJFJH_16575	0.88	-1.2
3,501,219	+		OLJFJH_16580	0.19	-0.4
3,501,219	+		OLJFJH_16580	0.19	+0.6
3,501,220	-		OLJFJH_16580	0.20	-0.3
3,501,286	-		OLJFJH_16580	0.35	+0.2
3,501,286	-		OLJFJH_16580	0.35	-0.3
3,501,385	-		OLJFJH_16580	0.58	+0.2
3,501,385	-		OLJFJH_16580	0.58	-0.7
3,501,431	+		OLJFJH_16580	0.69	-0.3
3,501,438	+		OLJFJH_16580	0.70	+0.5
3,501,439	-		OLJFJH_16580	0.70	-2.4
3,501,480	+		OLJFJH_16580	0.80	-2.7
3,501,480	+		OLJFJH_16580	0.80	+0.3
3,501,480	+		OLJFJH_16580	0.80	+0.3
3,501,481	-		OLJFJH_16580	0.80	-0.1
3,501,484	-		OLJFJH_16580	0.81	-1.8
3,501,484	-		OLJFJH_16580	0.81	+1.8
3,501,557	-				-3.6
3,501,573	+				-0.7
3,501,573	+				-1.0
3,501,574	-				-0.5
3,501,577	+				+0.4
3,501,578	-				+0.3
3,501,578	-				+0.5
3,501,578	-				-0.3
3,501,710	-		OLJFJH_16585	0.21	-0.4
3,501,724	+		OLJFJH_16585	0.22	-0.6
3,501,807	-		OLJFJH_16585	0.34	-0.3
3,502,047	+		OLJFJH_16585	0.68	-1.5