Strain Fitness in Erwinia amylovora T8 around OLJFJH_15990

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
3,366,313	+		OLJFJH_15980	0.79	+0.2
3,366,313	+		OLJFJH_15980	0.79	-0.5
3,366,313	+		OLJFJH_15980	0.79	-1.7
3,366,313	+		OLJFJH_15980	0.79	+0.1
3,366,314	-		OLJFJH_15980	0.79	-1.0
3,366,314	-		OLJFJH_15980	0.79	-0.2
3,366,314	-		OLJFJH_15980	0.79	+0.2
3,366,314	-		OLJFJH_15980	0.79	-0.0
3,366,319	+		OLJFJH_15980	0.79	+1.1
3,366,319	+		OLJFJH_15980	0.79	-0.3
3,366,365	-		OLJFJH_15980	0.83	-0.8
3,366,502	+				-0.8
3,366,512	+				-0.3
3,366,512	+				-0.8
3,366,513	-				-2.4
3,366,513	-				+2.1
3,366,513	-				-0.4
3,366,902	+		OLJFJH_15985	0.62	-0.2
3,367,129	-				-0.6
3,367,131	+				+0.2
3,367,131	+				-1.2
3,367,136	+				-1.0
3,367,352	+				-1.6
3,367,352	+				-3.1
3,367,354	+				-3.0
3,367,355	-				-1.7
3,367,355	-				-3.3
3,367,355	-				-2.9
3,367,566	+		OLJFJH_15990	0.27	-0.1
3,367,590	+		OLJFJH_15990	0.29	-1.1
3,367,621	+		OLJFJH_15990	0.32	-2.5
3,367,674	-		OLJFJH_15990	0.38	-2.3
3,367,674	-		OLJFJH_15990	0.38	-1.8
3,367,674	-		OLJFJH_15990	0.38	-1.9
3,367,677	+		OLJFJH_15990	0.38	-1.9
3,367,678	-		OLJFJH_15990	0.38	-2.5
3,367,694	-		OLJFJH_15990	0.40	-0.2
3,367,713	+		OLJFJH_15990	0.41	-0.9
3,367,749	-		OLJFJH_15990	0.45	-3.5
3,367,803	-		OLJFJH_15990	0.50	-3.4
3,367,841	+		OLJFJH_15990	0.54	-1.8
3,368,061	+		OLJFJH_15990	0.76	-1.1
3,368,094	+		OLJFJH_15990	0.79	-2.1
3,368,094	+		OLJFJH_15990	0.79	-0.7
3,368,149	+		OLJFJH_15990	0.85	-2.0
3,368,228	-				-0.5
3,368,228	-				-1.3
3,368,228	-				-2.9
3,368,300	+				-0.2
3,368,300	+				-2.8
3,368,300	+				-0.4
3,368,300	+				-2.7
3,368,301	+				-2.8
3,368,301	-				-0.6
3,368,301	-				-3.8
3,368,301	-				+0.1
3,368,301	-				-2.9
3,368,301	-				-1.1
3,368,402	-				-0.3
3,368,402	-				+0.8
3,368,436	+				-0.0
3,368,436	+				-0.2
3,368,436	+				-0.2
3,368,436	+				-2.3
3,368,436	+				-0.6
3,368,570	+				+1.1
3,368,571	-				+0.3
3,368,571	-				+1.5
3,368,614	+				-1.1
3,368,679	-		OLJFJH_15995	0.22	+0.5
3,368,702	-		OLJFJH_15995	0.26	-0.6
3,368,702	-		OLJFJH_15995	0.26	+0.7
3,368,702	-		OLJFJH_15995	0.26	+1.0
3,368,702	-		OLJFJH_15995	0.26	-0.5
3,368,702	-		OLJFJH_15995	0.26	-0.6
3,368,702	-		OLJFJH_15995	0.26	-0.3
3,368,702	-		OLJFJH_15995	0.26	-1.0
3,368,704	-		OLJFJH_15995	0.26	+0.1
3,368,704	-		OLJFJH_15995	0.26	+0.3
3,368,704	-		OLJFJH_15995	0.26	-0.2
3,368,704	-		OLJFJH_15995	0.26	-1.0
3,368,704	-		OLJFJH_15995	0.26	-0.5
3,368,704	-		OLJFJH_15995	0.26	-0.7
3,368,787	+		OLJFJH_15995	0.41	-0.9
3,368,787	+		OLJFJH_15995	0.41	-1.3
3,368,787	+		OLJFJH_15995	0.41	-1.0
3,368,788	-		OLJFJH_15995	0.41	-0.7
3,368,897	+		OLJFJH_15995	0.61	+0.1
3,368,897	+		OLJFJH_15995	0.61	+0.6
3,368,997	+		OLJFJH_15995	0.79	+0.3
3,369,106	+				-0.4
3,369,107	-				+0.6
3,369,107	-				+0.3
3,369,107	-				+0.6
3,369,108	+				+0.3
3,369,108	+				+0.3
3,369,109	-				-1.4
3,369,109	-				+0.5
3,369,129	+				-0.3
3,369,130	-				-0.8