Strain Fitness in Erwinia amylovora T8 around OLJFJH_15800

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
3,328,113	+		OLJFJH_15795	0.28	+0.1
3,328,215	-		OLJFJH_15795	0.44	+1.6
3,328,357	-		OLJFJH_15795	0.65	+1.1
3,328,432	+		OLJFJH_15795	0.77	+0.4
3,328,444	-		OLJFJH_15795	0.79	+0.1
3,328,507	-		OLJFJH_15795	0.88	+1.0
3,328,507	-		OLJFJH_15795	0.88	-0.4
3,328,537	-				-0.8
3,328,601	-				+0.7
3,328,613	+				+1.9
3,328,618	-				+1.3
3,328,788	-				-0.6
3,328,794	-				+0.1
3,328,826	+				+1.9
3,328,860	+				+0.7
3,328,969	+				-0.0
3,328,991	+				-0.3
3,328,993	+				+1.1
3,328,993	+				-0.2
3,328,994	-				+0.1
3,328,998	+				-0.3
3,329,000	+				+0.7
3,329,001	-				-1.6
3,329,001	-				-1.6
3,329,049	-				+1.0
3,329,222	+		OLJFJH_15800	0.68	+0.1
3,329,253	+		OLJFJH_15800	0.82	-2.0
3,329,253	+		OLJFJH_15800	0.82	-2.2
3,329,465	-		OLJFJH_15805	0.23	-0.1
3,329,467	+		OLJFJH_15805	0.23	-0.4
3,329,468	-		OLJFJH_15805	0.24	-0.4
3,329,468	-		OLJFJH_15805	0.24	+0.7
3,329,593	+		OLJFJH_15805	0.61	+1.3
3,329,621	-		OLJFJH_15805	0.70	+1.0
3,329,629	-		OLJFJH_15805	0.72	+1.3
3,329,629	-		OLJFJH_15805	0.72	-0.2
3,329,850	-		OLJFJH_15810	0.20	+0.5
3,329,870	-		OLJFJH_15810	0.23	-0.5
3,329,907	+		OLJFJH_15810	0.29	+0.0
3,329,959	+		OLJFJH_15810	0.37	-0.9
3,329,959	+		OLJFJH_15810	0.37	-0.2
3,329,959	+		OLJFJH_15810	0.37	+0.2
3,329,961	+		OLJFJH_15810	0.38	-1.0
3,329,961	+		OLJFJH_15810	0.38	+1.1
3,329,962	-		OLJFJH_15810	0.38	-0.1
3,329,972	+		OLJFJH_15810	0.39	-0.3
3,330,013	+		OLJFJH_15810	0.46	-0.0
3,330,014	-		OLJFJH_15810	0.46	+0.8
3,330,154	+		OLJFJH_15810	0.69	+0.9
3,330,154	+		OLJFJH_15810	0.69	-0.9
3,330,154	+		OLJFJH_15810	0.69	-0.3
3,330,154	+		OLJFJH_15810	0.69	+0.2
3,330,154	+		OLJFJH_15810	0.69	-1.1
3,330,155	-		OLJFJH_15810	0.69	+0.0
3,330,155	-		OLJFJH_15810	0.69	-0.1
3,330,155	-		OLJFJH_15810	0.69	+2.9
3,330,155	-		OLJFJH_15810	0.69	+0.1
3,330,188	+		OLJFJH_15810	0.74	+0.9
3,330,189	-		OLJFJH_15810	0.74	+0.1
3,330,279	+		OLJFJH_15810	0.89	+0.2