Strain Fitness in Erwinia amylovora T8 around OLJFJH_15555

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
3,278,333	-		OLJFJH_15545	0.50	+0.3
3,278,662	-		OLJFJH_15545	0.82	-0.7
3,278,825	-				-0.8
3,279,209	-		OLJFJH_15555	0.30	-1.8
3,279,388	-		OLJFJH_15555	0.64	-1.7
3,279,501	-		OLJFJH_15555	0.85	-0.5
3,279,513	-		OLJFJH_15555	0.88	-0.7
3,279,607	-				-0.7
3,279,607	-				-1.6
3,279,607	-				-0.7
3,279,671	+				-0.9
3,279,701	+				-0.5
3,279,734	-				-0.4
3,279,737	-				-0.5
3,279,737	-				-0.6
3,279,743	+				-1.8
3,279,744	-				-0.7
3,279,744	-				-0.2
3,279,766	+				-1.0
3,279,770	-				-0.9
3,279,770	-				-1.1
3,279,792	-		OLJFJH_15560	0.12	+1.4
3,279,931	+		OLJFJH_15560	0.36	-0.9
3,279,932	-		OLJFJH_15560	0.36	-0.8
3,279,978	-		OLJFJH_15560	0.44	-0.0
3,280,109	-		OLJFJH_15560	0.66	+0.4
3,280,131	+		OLJFJH_15560	0.70	+1.0
3,280,131	+		OLJFJH_15560	0.70	+0.1
3,280,132	-		OLJFJH_15560	0.70	+0.7
3,280,132	-		OLJFJH_15560	0.70	-1.4
3,280,194	-		OLJFJH_15560	0.81	+0.9
3,280,422	-				+0.4