Strain Fitness in Erwinia amylovora T8 around OLJFJH_15230

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
3,211,337	-		OLJFJH_15220	0.52	-1.5
3,211,355	-		OLJFJH_15220	0.58	+2.8
3,211,470	+				-0.7
3,211,562	-		OLJFJH_15225	0.26	-0.9
3,211,655	-		OLJFJH_15225	0.51	-0.2
3,211,655	-		OLJFJH_15225	0.51	-0.7
3,211,698	+		OLJFJH_15225	0.62	-1.6
3,211,698	+		OLJFJH_15225	0.62	-1.1
3,211,698	+		OLJFJH_15225	0.62	-0.7
3,211,699	-		OLJFJH_15225	0.62	-0.6
3,211,699	-		OLJFJH_15225	0.62	+0.9
3,211,699	-		OLJFJH_15225	0.62	+2.3
3,211,699	-		OLJFJH_15225	0.62	-0.9
3,211,700	+		OLJFJH_15225	0.62	+0.3
3,211,701	-		OLJFJH_15225	0.63	-0.4
3,211,718	+		OLJFJH_15225	0.67	+0.4
3,211,719	-		OLJFJH_15225	0.67	-0.1
3,211,809	+				-1.5
3,211,825	-				+0.3
3,211,825	-				+0.9
3,211,825	-				-0.0
3,211,842	+				+1.5
3,211,855	-				+0.7
3,211,955	-				-0.5
3,212,128	+				-1.1
3,212,286	+				-0.6
3,212,292	-				-0.5
3,213,027	-		OLJFJH_15230	0.86	-1.0
3,213,107	+				-0.3
3,213,129	+				-1.0
3,213,130	-				+0.5
3,213,130	-				+0.9
3,213,148	-				-0.6
3,213,148	-				-1.6
3,213,149	+				-0.1
3,213,869	-		OLJFJH_15235	0.53	+0.6