Strain Fitness in Erwinia amylovora T8 around OLJFJH_15175

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
3,202,397	-		OLJFJH_15160	0.77	-2.1
3,202,494	+				+0.1
3,202,494	+				-0.3
3,202,495	-				-0.1
3,202,495	-				-1.0
3,202,495	-				+0.1
3,202,495	-				-0.1
3,202,497	-				-0.5
3,202,516	+				-0.2
3,202,517	-				-0.3
3,202,657	+				+0.1
3,202,697	+		OLJFJH_15165	0.17	+1.3
3,202,698	-		OLJFJH_15165	0.17	-1.0
3,202,760	+		OLJFJH_15165	0.34	+0.5
3,202,760	+		OLJFJH_15165	0.34	-0.7
3,202,761	-		OLJFJH_15165	0.34	-1.4
3,202,764	+		OLJFJH_15165	0.35	-1.4
3,202,765	-		OLJFJH_15165	0.35	-0.5
3,202,765	-		OLJFJH_15165	0.35	-1.7
3,202,808	+		OLJFJH_15165	0.47	-0.2
3,202,808	+		OLJFJH_15165	0.47	+1.1
3,202,808	+		OLJFJH_15165	0.47	-0.4
3,202,809	-		OLJFJH_15165	0.47	-1.7
3,202,809	-		OLJFJH_15165	0.47	+0.1
3,202,843	+		OLJFJH_15165	0.57	+1.8
3,202,844	-		OLJFJH_15165	0.57	-0.9
3,202,939	-				+0.6
3,202,943	-				-0.2
3,202,943	-				-0.9
3,202,976	+				+0.5
3,203,051	+		OLJFJH_15170	0.50	+1.2
3,203,051	+		OLJFJH_15170	0.50	-1.3
3,203,051	+		OLJFJH_15170	0.50	+0.9
3,203,052	-		OLJFJH_15170	0.50	-1.1
3,203,052	-		OLJFJH_15170	0.50	-1.2
3,203,065	-		OLJFJH_15170	0.54	+0.1
3,203,199	-				-0.1
3,203,339	+				-0.4
3,203,490	+		OLJFJH_15175	0.10	-3.3
3,203,491	-		OLJFJH_15175	0.11	-0.5
3,203,672	+		OLJFJH_15175	0.30	-2.9
3,203,707	+		OLJFJH_15175	0.34	-2.6
3,203,708	-		OLJFJH_15175	0.34	-1.4
3,203,730	+		OLJFJH_15175	0.36	-3.5
3,203,730	+		OLJFJH_15175	0.36	-2.9
3,203,730	+		OLJFJH_15175	0.36	-2.4
3,203,730	+		OLJFJH_15175	0.36	-4.2
3,203,730	+		OLJFJH_15175	0.36	-3.1
3,203,730	+		OLJFJH_15175	0.36	-2.9
3,203,731	-		OLJFJH_15175	0.36	-2.4
3,203,731	-		OLJFJH_15175	0.36	-2.3
3,203,731	-		OLJFJH_15175	0.36	-2.1
3,203,731	-		OLJFJH_15175	0.36	-3.4
3,203,747	+		OLJFJH_15175	0.38	-1.4
3,203,753	-		OLJFJH_15175	0.39	-2.2
3,203,923	+		OLJFJH_15175	0.57	-4.0
3,203,924	-		OLJFJH_15175	0.57	-3.0
3,203,924	-		OLJFJH_15175	0.57	-3.7
3,203,929	+		OLJFJH_15175	0.58	-1.6
3,204,072	-		OLJFJH_15175	0.73	-2.9
3,204,074	+		OLJFJH_15175	0.73	-3.1
3,204,075	-		OLJFJH_15175	0.73	-3.1
3,204,075	-		OLJFJH_15175	0.73	-2.9
3,204,092	-		OLJFJH_15175	0.75	-3.4
3,204,094	+		OLJFJH_15175	0.75	-3.3
3,204,095	-		OLJFJH_15175	0.75	-2.3
3,204,160	+		OLJFJH_15175	0.82	-2.6
3,204,161	-		OLJFJH_15175	0.83	-3.6
3,204,163	+		OLJFJH_15175	0.83	-2.2
3,204,164	-		OLJFJH_15175	0.83	-1.8
3,204,174	+		OLJFJH_15175	0.84	-2.7
3,204,175	-		OLJFJH_15175	0.84	-2.8
3,204,220	-		OLJFJH_15175	0.89	-3.1
3,204,367	+				+1.7
3,204,367	+				-0.6
3,204,368	-				+0.9
3,204,482	-				+0.7
3,204,484	+				-0.7
3,204,484	+				-0.2
3,204,564	+				-0.5
3,204,564	+				+0.4
3,204,564	+				+1.1
3,204,566	+				-0.5
3,204,572	+				-0.3
3,204,572	+				-1.0
3,204,576	-				+3.9
3,204,594	-				+0.7
3,204,595	+				-0.2
3,204,595	+				-0.3
3,204,642	+				+0.2
3,204,643	-				-0.4
3,204,726	+				-0.4
3,204,752	+				+0.3
3,204,752	+				+1.2
3,204,753	-				-0.0
3,204,753	-				-0.3
3,204,849	-		OLJFJH_15180	0.14	-0.5
3,204,897	+		OLJFJH_15180	0.17	+0.9
3,204,985	-		OLJFJH_15180	0.22	-0.2
3,205,043	+		OLJFJH_15180	0.26	+0.6
3,205,056	+		OLJFJH_15180	0.26	+3.1
3,205,099	+		OLJFJH_15180	0.29	+0.1
3,205,100	-		OLJFJH_15180	0.29	+0.1
3,205,111	+		OLJFJH_15180	0.30	-0.3
3,205,120	-		OLJFJH_15180	0.30	+0.5
3,205,207	-		OLJFJH_15180	0.35	+0.9
3,205,228	+		OLJFJH_15180	0.37	+0.9
3,205,231	+		OLJFJH_15180	0.37	-0.0
3,205,231	+		OLJFJH_15180	0.37	+1.2
3,205,231	+		OLJFJH_15180	0.37	+0.3
3,205,277	+		OLJFJH_15180	0.40	-0.5
3,205,277	+		OLJFJH_15180	0.40	+0.6
3,205,277	+		OLJFJH_15180	0.40	+0.1
3,205,278	-		OLJFJH_15180	0.40	-0.5