Strain Fitness in Erwinia amylovora T8 around OLJFJH_13440

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
2,829,548	-				+1.5
2,829,548	-				+0.2
2,829,716	+				-1.7
2,829,717	-				-0.3
2,829,948	+				-1.6
2,829,948	+				+0.5
2,829,972	-				+0.7
2,830,082	-				+0.1
2,830,108	-		OLJFJH_13435	0.14	+0.0
2,830,125	+		OLJFJH_13435	0.20	-1.4
2,830,125	+		OLJFJH_13435	0.20	-1.3
2,830,275	-		OLJFJH_13435	0.70	+1.1
2,830,275	-		OLJFJH_13435	0.70	-0.1
2,830,280	+		OLJFJH_13435	0.72	+1.5
2,830,348	-				+2.6
2,830,348	-				-1.2
2,830,356	+				-1.3
2,830,356	+				-0.7
2,830,357	-				-0.7
2,830,357	-				-0.7
2,830,357	-				-0.8
2,830,357	-				+0.4
2,830,431	-				-0.0
2,830,437	+				+0.6
2,830,451	+				-2.4
2,830,473	-				-0.2
2,830,566	-				-0.4
2,830,566	-				+0.8
2,830,589	-				-0.7
2,830,589	-				-1.7
2,830,660	-		OLJFJH_13440	0.15	-1.9
2,830,961	+		OLJFJH_13440	0.57	-1.6
2,831,129	+		OLJFJH_13440	0.80	-0.7
2,831,129	+		OLJFJH_13440	0.80	+0.8
2,831,129	+		OLJFJH_13440	0.80	-0.2
2,831,197	-		OLJFJH_13440	0.89	-1.7
2,831,228	+				-1.5
2,831,229	-				-0.7
2,831,349	-				-0.3
2,831,349	-				-0.8
2,831,367	+				+1.3
2,831,426	+		OLJFJH_13445	0.18	+0.7
2,831,427	-		OLJFJH_13445	0.19	-0.4
2,831,430	+		OLJFJH_13445	0.19	-0.7
2,831,430	+		OLJFJH_13445	0.19	-0.0
2,831,430	+		OLJFJH_13445	0.19	-1.2
2,831,430	+		OLJFJH_13445	0.19	-1.7
2,831,431	-		OLJFJH_13445	0.20	-0.0
2,831,431	-		OLJFJH_13445	0.20	-0.7
2,831,431	-		OLJFJH_13445	0.20	+0.1
2,831,431	-		OLJFJH_13445	0.20	-0.6
2,831,431	-		OLJFJH_13445	0.20	-1.1
2,831,465	-		OLJFJH_13445	0.28	+0.6
2,831,557	+		OLJFJH_13445	0.49	-0.4
2,831,558	-		OLJFJH_13445	0.49	-1.6
2,831,558	-		OLJFJH_13445	0.49	-0.3
2,831,558	-		OLJFJH_13445	0.49	-1.8
2,831,558	-		OLJFJH_13445	0.49	-0.9
2,831,584	-		OLJFJH_13445	0.55	+1.9
2,831,584	-		OLJFJH_13445	0.55	-0.9
2,831,709	+		OLJFJH_13445	0.84	-0.9
2,831,776	+				+3.1
2,831,776	+				+0.1
2,831,776	+				-0.0
2,831,776	+				-0.4
2,831,776	+				-1.1
2,831,776	+				+0.4
2,831,777	-				+1.1
2,831,778	+				+0.0
2,831,778	+				+3.1
2,831,779	-				-0.2
2,831,779	-				-0.6
2,831,848	+				-0.7
2,831,880	-				+0.2
2,831,881	+				-1.8
2,831,882	-				+0.9
2,831,882	-				-2.4
2,831,882	-				+1.7
2,831,882	-				+2.3
2,831,937	-		OLJFJH_13450	0.17	-0.4
2,831,978	-		OLJFJH_13450	0.24	-1.2
2,831,978	-		OLJFJH_13450	0.24	-0.9