Strain Fitness in Erwinia amylovora T8 around OLJFJH_11675

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
2,445,554	-				+0.6
2,445,575	+				-0.7
2,445,575	+				-1.6
2,445,616	+				+1.4
2,445,627	-				+0.3
2,445,662	-		OLJFJH_11670	0.14	+1.6
2,445,683	+		OLJFJH_11670	0.20	+1.5
2,445,764	+		OLJFJH_11670	0.44	-0.2
2,445,939	-				+0.1
2,446,046	-				+0.6
2,446,046	-				-1.0
2,446,046	-				-0.2
2,446,046	-				+0.7
2,446,133	+				-0.2
2,446,154	+				+0.4
2,446,154	+				+1.8
2,446,228	-				+0.8
2,446,290	+				-0.2
2,446,291	-				+1.4
2,446,291	-				+0.6
2,446,339	+				-0.2
2,446,354	+				-1.6
2,446,369	-				+1.6
2,446,369	-				-0.9
2,446,465	+				+0.1
2,446,465	+				-1.1
2,446,506	+				-0.6
2,446,506	+				+0.5
2,446,638	+		OLJFJH_11675	0.48	-0.5
2,446,639	-		OLJFJH_11675	0.49	-1.6
2,446,676	+		OLJFJH_11675	0.62	-0.7
2,446,812	+				-1.6
2,446,818	+				-0.1
2,446,818	+				+0.5
2,446,818	+				-1.1
2,446,821	+				-0.7
2,446,821	+				-0.9
2,446,835	-				-1.6
2,446,842	+				+1.9
2,446,855	-				-2.3
2,446,860	+				+0.2
2,446,860	+				-0.4
2,446,882	-				+1.9
2,446,882	-				-1.3
2,446,952	-				-0.8
2,446,991	+				-0.2
2,447,118	+				-1.1
2,447,135	+				-0.4
2,447,150	-				-0.5
2,447,150	-				+0.4
2,447,159	+				-0.4
2,447,251	+				-1.0
2,447,261	+				-0.1
2,447,333	+		OLJFJH_11685	0.11	+0.1
2,447,391	-		OLJFJH_11685	0.14	-0.9
2,447,426	+		OLJFJH_11685	0.16	+0.3
2,447,426	+		OLJFJH_11685	0.16	-1.1
2,447,426	+		OLJFJH_11685	0.16	+0.1
2,447,472	-		OLJFJH_11685	0.18	-0.2
2,447,517	-		OLJFJH_11685	0.21	-1.0
2,447,532	-		OLJFJH_11685	0.22	+0.8
2,447,745	-		OLJFJH_11685	0.34	-0.2