Strain Fitness in Erwinia amylovora T8 around OLJFJH_11560

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
2,418,442	+		OLJFJH_11555	0.71	+2.5
2,418,451	-		OLJFJH_11555	0.71	-0.8
2,418,481	+		OLJFJH_11555	0.72	+0.1
2,418,482	-		OLJFJH_11555	0.72	-0.6
2,418,635	+		OLJFJH_11555	0.77	-0.9
2,418,635	+		OLJFJH_11555	0.77	+0.3
2,418,635	+		OLJFJH_11555	0.77	-0.1
2,418,636	-		OLJFJH_11555	0.77	+2.2
2,418,667	+		OLJFJH_11555	0.78	+0.8
2,418,790	+		OLJFJH_11555	0.83	+0.2
2,418,790	+		OLJFJH_11555	0.83	+1.0
2,418,899	-		OLJFJH_11555	0.86	-0.4
2,418,912	+		OLJFJH_11555	0.87	+0.8
2,418,912	+		OLJFJH_11555	0.87	+0.5
2,418,912	+		OLJFJH_11555	0.87	+1.7
2,418,913	-		OLJFJH_11555	0.87	+1.1
2,418,942	+		OLJFJH_11555	0.88	+0.3
2,418,942	+		OLJFJH_11555	0.88	+0.8
2,419,032	+				+2.5
2,419,032	+				+1.8
2,419,033	-				-0.0
2,419,033	-				-1.2
2,419,033	-				+0.1
2,419,036	+				+0.4
2,419,036	+				-0.6
2,419,036	+				+1.1
2,419,036	+				+1.2
2,419,037	-				+0.5
2,419,037	-				+0.2
2,419,169	-				-1.1
2,419,241	+				-0.2
2,419,242	-				+1.5
2,419,279	+				-0.4
2,419,313	-				+0.5
2,419,313	-				-0.6
2,419,354	+				+1.8
2,419,409	-				+2.8
2,419,425	+				+1.2
2,419,429	+				+0.2
2,419,429	+				+0.5
2,419,429	+				-1.4
2,419,430	-				-0.6
2,419,430	-				+2.2
2,419,448	+				-1.7
2,419,461	+				-0.9
2,419,461	+				-1.3
2,419,462	-				-1.4
2,419,466	-				+0.6
2,419,493	+		OLJFJH_11560	0.11	-2.4
2,419,686	+		OLJFJH_11560	0.40	-0.1
2,419,854	+		OLJFJH_11560	0.66	-1.1
2,419,855	-		OLJFJH_11560	0.67	-0.6
2,419,855	-		OLJFJH_11560	0.67	-1.0
2,419,945	+		OLJFJH_11560	0.80	+0.1
2,419,950	-		OLJFJH_11560	0.81	-1.5
2,420,033	-				-0.5
2,420,071	+				-2.8
2,420,071	+				-0.8
2,420,071	+				-0.1
2,420,075	-				+4.4
2,420,107	+				+0.0
2,420,107	+				-0.5
2,420,108	-				+1.5
2,420,141	+				-0.8
2,420,142	-				+0.5
2,420,172	+				-1.5
2,420,202	+				-0.5
2,420,208	+				-0.0
2,420,208	+				-0.9
2,420,256	-				+0.0
2,420,260	+				-1.7
2,420,261	-				+2.6
2,420,284	+				-0.6
2,420,284	+				-1.7
2,420,284	+				-0.7
2,420,284	+				-2.6
2,420,285	-				-0.8
2,420,285	-				+1.3
2,420,489	+		OLJFJH_11565	0.16	+0.6
2,420,532	+		OLJFJH_11565	0.17	-0.2
2,420,532	+		OLJFJH_11565	0.17	-1.5
2,420,745	-		OLJFJH_11565	0.25	+0.5
2,420,746	+		OLJFJH_11565	0.25	+0.8
2,420,801	+		OLJFJH_11565	0.27	+0.3
2,420,860	+		OLJFJH_11565	0.30	+0.4
2,420,864	+		OLJFJH_11565	0.30	+1.2
2,420,865	-		OLJFJH_11565	0.30	+1.2
2,420,928	+		OLJFJH_11565	0.32	+0.1
2,420,928	+		OLJFJH_11565	0.32	+0.1
2,420,929	-		OLJFJH_11565	0.32	+0.5
2,420,929	-		OLJFJH_11565	0.32	-0.1
2,421,017	-		OLJFJH_11565	0.36	+0.2
2,421,029	+		OLJFJH_11565	0.36	-0.1
2,421,029	+		OLJFJH_11565	0.36	-2.0
2,421,030	-		OLJFJH_11565	0.36	-0.8
2,421,054	-		OLJFJH_11565	0.37	+1.2