Strain Fitness in Erwinia amylovora T8 around OLJFJH_11465

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
2,391,505	-		OLJFJH_11460	0.61	-1.4
2,391,505	-		OLJFJH_11460	0.61	+0.3
2,391,647	+		OLJFJH_11460	0.69	-0.9
2,391,660	+		OLJFJH_11460	0.70	-1.7
2,391,660	+		OLJFJH_11460	0.70	-0.7
2,391,680	+		OLJFJH_11460	0.71	-1.9
2,391,681	-		OLJFJH_11460	0.71	-0.9
2,391,812	-		OLJFJH_11460	0.78	-2.8
2,392,011	+		OLJFJH_11460	0.89	-0.8
2,392,012	-		OLJFJH_11460	0.89	-2.3
2,392,035	+				-2.1
2,392,215	+				+1.1
2,392,225	+				+1.5
2,392,225	+				-1.1
2,392,225	+				-0.2
2,392,226	-				-0.7
2,392,226	-				-0.6
2,392,226	-				-0.3
2,392,226	-				-2.1
2,392,226	-				-2.9
2,392,339	+				+0.9
2,392,339	+				+2.2
2,392,339	+				+0.5
2,392,339	+				-2.1
2,392,340	-				-0.9
2,392,343	+				-1.2
2,392,343	+				-0.9
2,392,343	+				-0.8
2,392,343	+				+0.1
2,392,343	+				-0.5
2,392,343	+				-0.6
2,392,343	+				-0.5
2,392,343	+				+0.3
2,392,344	-				-0.9
2,392,344	-				-0.1
2,392,344	-				-2.5
2,392,344	-				-1.5
2,392,344	-				-0.7
2,392,344	-				-1.8
2,392,344	-				+1.9
2,392,344	-				-0.5
2,392,344	-				+0.3
2,392,347	+				-0.7
2,392,348	-				-1.5
2,392,348	-				+0.2
2,392,348	-				-0.7
2,392,394	+				+0.5
2,392,434	+				+2.7
2,392,434	+				+0.5
2,392,434	+				-1.3
2,392,435	-				-0.9
2,392,435	-				+0.9
2,392,448	-				-1.2
2,392,452	+				-2.3
2,392,452	+				+3.5
2,392,452	+				-0.7
2,392,452	+				-0.3
2,392,452	+				+0.0
2,392,453	-				+0.5
2,392,455	+				-1.1
2,392,881	-		OLJFJH_11465	0.30	-1.8
2,392,954	+		OLJFJH_11465	0.34	-0.7
2,392,958	+		OLJFJH_11465	0.35	-0.2
2,392,959	-		OLJFJH_11465	0.35	+0.3
2,392,959	-		OLJFJH_11465	0.35	+2.1
2,392,959	-		OLJFJH_11465	0.35	+0.1
2,392,959	-		OLJFJH_11465	0.35	-0.1
2,392,959	-		OLJFJH_11465	0.35	+0.1
2,392,959	-		OLJFJH_11465	0.35	-1.8
2,393,048	+		OLJFJH_11465	0.41	-2.8
2,393,378	+		OLJFJH_11465	0.62	-0.5
2,393,379	-		OLJFJH_11465	0.62	-1.3
2,393,416	+		OLJFJH_11465	0.65	-1.6
2,393,416	+		OLJFJH_11465	0.65	-1.0
2,393,416	+		OLJFJH_11465	0.65	-2.1
2,393,421	-		OLJFJH_11465	0.65	-0.5
2,393,421	-		OLJFJH_11465	0.65	-3.5
2,393,421	-		OLJFJH_11465	0.65	-0.6
2,393,421	-		OLJFJH_11465	0.65	-2.1
2,393,421	-		OLJFJH_11465	0.65	-0.2
2,393,516	+		OLJFJH_11465	0.71	-1.7
2,393,516	+		OLJFJH_11465	0.71	+0.3
2,393,517	-		OLJFJH_11465	0.71	-0.3
2,393,517	-		OLJFJH_11465	0.71	+1.1
2,393,517	-		OLJFJH_11465	0.71	+0.1
2,393,692	+		OLJFJH_11465	0.83	-1.4
2,393,692	+		OLJFJH_11465	0.83	-0.8
2,393,692	+		OLJFJH_11465	0.83	-1.8
2,393,693	-		OLJFJH_11465	0.83	+0.1
2,393,695	+		OLJFJH_11465	0.83	-2.0
2,393,733	-		OLJFJH_11465	0.86	-2.3
2,393,760	-		OLJFJH_11465	0.87	-0.7
2,393,938	+				-0.6
2,393,939	-				-1.2
2,393,964	+				+0.4
2,393,965	-				-1.1
2,394,113	+		OLJFJH_11470	0.11	-0.0
2,394,114	-		OLJFJH_11470	0.11	-1.8
2,394,182	+		OLJFJH_11470	0.15	-1.7
2,394,183	-		OLJFJH_11470	0.16	-0.3
2,394,183	-		OLJFJH_11470	0.16	-0.9
2,394,183	-		OLJFJH_11470	0.16	-0.5
2,394,183	-		OLJFJH_11470	0.16	+0.1
2,394,272	+		OLJFJH_11470	0.22	-1.1
2,394,272	+		OLJFJH_11470	0.22	-2.7
2,394,273	-		OLJFJH_11470	0.22	+0.2
2,394,273	-		OLJFJH_11470	0.22	-0.9
2,394,431	+		OLJFJH_11470	0.33	-0.1
2,394,431	+		OLJFJH_11470	0.33	-0.2
2,394,431	+		OLJFJH_11470	0.33	-1.3
2,394,432	-		OLJFJH_11470	0.33	-1.3
2,394,432	-		OLJFJH_11470	0.33	-1.1
2,394,730	+		OLJFJH_11470	0.53	-1.3
2,394,735	-		OLJFJH_11470	0.53	-1.5
2,394,735	-		OLJFJH_11470	0.53	+2.8
2,394,772	-		OLJFJH_11470	0.56	-1.0