Strain Fitness in Erwinia amylovora T8 around OLJFJH_10305

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
2,121,158	+		OLJFJH_10300	0.53	+0.0
2,121,216	+		OLJFJH_10300	0.57	+1.5
2,121,217	-		OLJFJH_10300	0.57	-0.6
2,121,217	-		OLJFJH_10300	0.57	-0.4
2,121,255	+		OLJFJH_10300	0.60	-0.9
2,121,255	+		OLJFJH_10300	0.60	+1.0
2,121,255	+		OLJFJH_10300	0.60	-0.5
2,121,255	+		OLJFJH_10300	0.60	+0.5
2,121,256	-		OLJFJH_10300	0.60	-0.3
2,121,256	-		OLJFJH_10300	0.60	-0.1
2,121,256	-		OLJFJH_10300	0.60	-0.8
2,121,286	+		OLJFJH_10300	0.62	-1.1
2,121,287	-		OLJFJH_10300	0.62	-0.5
2,121,374	+		OLJFJH_10300	0.68	+0.9
2,121,473	+		OLJFJH_10300	0.75	-2.3
2,121,473	+		OLJFJH_10300	0.75	-0.1
2,121,474	-		OLJFJH_10300	0.75	-1.1
2,121,477	-		OLJFJH_10300	0.75	-0.5
2,121,519	-		OLJFJH_10300	0.78	-0.6
2,121,648	-		OLJFJH_10300	0.86	+0.2
2,121,680	+		OLJFJH_10300	0.89	-0.0
2,121,680	+		OLJFJH_10300	0.89	-0.7
2,121,680	+		OLJFJH_10300	0.89	-0.0
2,121,681	-		OLJFJH_10300	0.89	-0.3
2,121,683	+		OLJFJH_10300	0.89	+0.8
2,121,683	+		OLJFJH_10300	0.89	-1.3
2,121,684	-		OLJFJH_10300	0.89	-1.4
2,121,711	+				-1.9
2,121,799	+				+0.0
2,121,895	+				-0.9
2,121,896	-				-0.5
2,122,048	+				-0.4
2,122,048	+				+0.5
2,122,049	-				-3.0
2,122,049	-				-0.2
2,122,163	+				-2.3
2,122,214	+				-3.3
2,122,214	+				-1.5
2,122,215	-				-3.2
2,122,227	+				-3.4
2,122,227	+				-2.6
2,122,227	+				-1.4
2,122,228	-				-3.6
2,122,272	-				-3.1
2,122,299	+				-2.7
2,122,406	+				-4.7
2,122,455	+				-3.5
2,122,455	+				-3.1
2,122,455	+				-0.2
2,122,455	+				-0.5
2,122,456	-				-1.5
2,122,456	-				-4.7
2,122,737	+		OLJFJH_10305	0.16	-4.0
2,122,737	+		OLJFJH_10305	0.16	-1.9
2,122,737	+		OLJFJH_10305	0.16	-2.9
2,122,737	+		OLJFJH_10305	0.16	-5.2
2,122,737	+		OLJFJH_10305	0.16	+0.1
2,122,738	-		OLJFJH_10305	0.16	-2.8
2,122,738	-		OLJFJH_10305	0.16	-3.1
2,122,738	-		OLJFJH_10305	0.16	-3.5
2,122,738	-		OLJFJH_10305	0.16	-2.7
2,122,738	-		OLJFJH_10305	0.16	+0.1
2,122,738	-		OLJFJH_10305	0.16	-2.0
2,122,738	-		OLJFJH_10305	0.16	-1.8
2,122,738	-		OLJFJH_10305	0.16	-2.4
2,122,738	-		OLJFJH_10305	0.16	-2.7
2,122,739	+		OLJFJH_10305	0.16	-2.0
2,122,739	+		OLJFJH_10305	0.16	-3.9
2,122,739	+		OLJFJH_10305	0.16	-5.2
2,122,740	-		OLJFJH_10305	0.16	-1.2
2,122,832	+		OLJFJH_10305	0.18	-2.8
2,122,833	-		OLJFJH_10305	0.18	-4.2
2,122,847	+		OLJFJH_10305	0.19	-1.4
2,122,885	-		OLJFJH_10305	0.20	-3.5
2,122,887	-		OLJFJH_10305	0.20	-0.4
2,122,979	+		OLJFJH_10305	0.22	-4.2
2,123,012	+		OLJFJH_10305	0.23	-3.2
2,123,244	-		OLJFJH_10305	0.29	-4.3
2,123,289	+		OLJFJH_10305	0.30	-3.3
2,123,290	-		OLJFJH_10305	0.30	-4.5
2,123,290	-		OLJFJH_10305	0.30	-3.9
2,123,349	-		OLJFJH_10305	0.32	-3.5
2,123,349	-		OLJFJH_10305	0.32	-3.1
2,123,373	-		OLJFJH_10305	0.32	-2.6
2,123,423	+		OLJFJH_10305	0.34	-3.5
2,123,690	+		OLJFJH_10305	0.40	-3.1
2,123,766	+		OLJFJH_10305	0.42	-0.5
2,123,767	-		OLJFJH_10305	0.42	-0.4
2,123,880	-		OLJFJH_10305	0.45	-2.7
2,123,900	+		OLJFJH_10305	0.46	-3.2
2,124,071	+		OLJFJH_10305	0.50	-5.4
2,124,072	-		OLJFJH_10305	0.50	-3.8
2,124,074	+		OLJFJH_10305	0.50	-2.4
2,124,075	-		OLJFJH_10305	0.50	-4.9
2,124,183	+		OLJFJH_10305	0.53	+1.1
2,124,184	-		OLJFJH_10305	0.53	-3.0
2,124,184	-		OLJFJH_10305	0.53	-3.0
2,124,375	+		OLJFJH_10305	0.58	-3.3
2,124,376	-		OLJFJH_10305	0.58	-3.0
2,124,723	-		OLJFJH_10305	0.67	-2.9
2,124,933	-		OLJFJH_10305	0.72	-1.8
2,125,010	+		OLJFJH_10305	0.74	-3.2
2,125,010	+		OLJFJH_10305	0.74	-1.6
2,125,052	+		OLJFJH_10305	0.75	-4.2
2,125,052	+		OLJFJH_10305	0.75	-3.5
2,125,052	+		OLJFJH_10305	0.75	-3.2
2,125,411	+		OLJFJH_10305	0.85	-0.9
2,125,718	-				+0.1
2,125,766	-				-2.0
2,125,766	-				-3.5
2,125,848	-				-1.7
2,126,015	-				-0.7
2,126,015	-				+0.6
2,126,015	-				-0.5
2,126,015	-				-1.5
2,126,030	-				-1.5
2,126,112	+				+0.8
2,126,153	+				-0.6
2,126,154	-				+0.7
2,126,154	-				-1.4
2,126,367	+				-0.1
2,126,368	-				-0.3
2,126,442	+				+0.0
2,126,649	+				+0.2
2,126,862	-		OLJFJH_10320	0.19	+3.1