Strain Fitness in Erwinia amylovora T8 around OLJFJH_10195

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
2,099,535	-				+2.2
2,099,547	+				+1.2
2,099,568	+				+0.1
2,099,573	+				+0.1
2,099,573	+				+0.2
2,099,574	-				+0.2
2,099,574	-				+0.4
2,099,575	+				+0.8
2,099,575	+				-0.9
2,099,576	-				-0.3
2,099,576	-				-1.2
2,099,764	-		OLJFJH_10190	0.10	+0.8
2,099,764	-		OLJFJH_10190	0.10	+0.1
2,099,834	+		OLJFJH_10190	0.20	-1.1
2,099,835	-		OLJFJH_10190	0.21	-1.2
2,099,835	-		OLJFJH_10190	0.21	+0.4
2,099,835	-		OLJFJH_10190	0.21	-0.3
2,099,937	+		OLJFJH_10190	0.36	+0.2
2,100,098	+		OLJFJH_10190	0.59	-0.1
2,100,098	+		OLJFJH_10190	0.59	-0.0
2,100,098	+		OLJFJH_10190	0.59	-1.5
2,100,098	+		OLJFJH_10190	0.59	-1.0
2,100,099	-		OLJFJH_10190	0.59	+0.5
2,100,099	-		OLJFJH_10190	0.59	+0.3
2,100,099	-		OLJFJH_10190	0.59	+0.5
2,100,099	-		OLJFJH_10190	0.59	-0.1
2,100,102	+		OLJFJH_10190	0.60	-0.1
2,100,102	+		OLJFJH_10190	0.60	-0.5
2,100,102	+		OLJFJH_10190	0.60	+0.0
2,100,103	-		OLJFJH_10190	0.60	+1.9
2,100,264	-		OLJFJH_10190	0.84	+0.2
2,100,264	-		OLJFJH_10190	0.84	-1.0
2,100,267	+		OLJFJH_10190	0.84	-0.6
2,100,267	+		OLJFJH_10190	0.84	+1.5
2,100,267	+		OLJFJH_10190	0.84	+0.7
2,100,274	-		OLJFJH_10190	0.85	-0.4
2,100,305	-		OLJFJH_10190	0.90	-0.3
2,100,320	+				+0.9
2,100,320	+				-0.6
2,100,321	-				+1.2
2,100,321	-				-1.6
2,100,400	+				+0.3
2,100,400	+				+1.2
2,100,401	-				+0.3
2,100,401	-				-0.2
2,100,404	+				+0.8
2,100,405	-				-0.7
2,100,429	+		OLJFJH_10195	0.22	-1.1
2,100,429	+		OLJFJH_10195	0.22	-1.2
2,100,430	-		OLJFJH_10195	0.23	-0.5
2,100,430	-		OLJFJH_10195	0.23	-1.0
2,100,430	-		OLJFJH_10195	0.23	-0.4
2,100,430	-		OLJFJH_10195	0.23	-0.2
2,100,430	-		OLJFJH_10195	0.23	-0.9
2,100,430	-		OLJFJH_10195	0.23	-1.5
2,100,576	+				+1.0
2,100,576	+				-0.7
2,100,577	-				-2.1
2,100,606	+				+0.1
2,100,694	+				+0.3
2,100,695	-				-0.3
2,100,719	+				-0.2
2,100,841	-				-0.1
2,100,934	-				+0.1
2,100,934	-				-0.6
2,100,946	-				-0.3
2,101,010	-				-0.4
2,101,029	+				-0.5
2,101,368	+		OLJFJH_10200	0.25	+0.2
2,101,368	+		OLJFJH_10200	0.25	+0.2
2,101,368	+		OLJFJH_10200	0.25	-2.4
2,101,369	-		OLJFJH_10200	0.25	-1.1
2,101,382	-		OLJFJH_10200	0.26	-0.7
2,101,533	+		OLJFJH_10200	0.38	-1.6
2,101,534	-		OLJFJH_10200	0.38	-0.7
2,101,534	-		OLJFJH_10200	0.38	-1.7