Strain Fitness in Erwinia amylovora T8 around OLJFJH_08835

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
1,809,151	-		OLJFJH_08830	0.65	+1.7
1,809,151	-		OLJFJH_08830	0.65	+0.4
1,809,182	+		OLJFJH_08830	0.66	-1.0
1,809,191	+		OLJFJH_08830	0.67	-0.1
1,809,191	+		OLJFJH_08830	0.67	-0.6
1,809,191	+		OLJFJH_08830	0.67	+0.5
1,809,191	+		OLJFJH_08830	0.67	+0.6
1,809,191	+		OLJFJH_08830	0.67	-0.1
1,809,191	+		OLJFJH_08830	0.67	-1.5
1,809,191	+		OLJFJH_08830	0.67	-0.0
1,809,191	+		OLJFJH_08830	0.67	-0.3
1,809,192	-		OLJFJH_08830	0.67	-0.7
1,809,192	-		OLJFJH_08830	0.67	+1.1
1,809,192	-		OLJFJH_08830	0.67	-1.0
1,809,192	-		OLJFJH_08830	0.67	-1.0
1,809,262	+		OLJFJH_08830	0.71	-0.8
1,809,263	-		OLJFJH_08830	0.71	+0.6
1,809,275	+		OLJFJH_08830	0.72	-1.5
1,809,276	-		OLJFJH_08830	0.72	+0.0
1,809,321	-		OLJFJH_08830	0.75	+0.1
1,809,707	-				-1.7
1,809,738	+				+0.8
1,809,739	-				-0.5
1,809,741	-				+2.1
1,809,749	+				+0.5
1,809,749	+				+0.3
1,809,792	+				+0.2
1,809,792	+				+0.0
1,809,793	-				+4.8
1,809,793	-				+0.7
1,809,922	-				+0.4
1,809,959	+				-0.3
1,809,988	-				+3.5
1,810,014	-				-0.1
1,810,016	+				+0.5
1,810,016	+				-0.5
1,810,017	-				-0.8
1,810,023	-				-0.8
1,810,049	+				-0.4
1,810,050	-				-0.1
1,810,058	-				-2.7
1,810,064	-				-2.7
1,810,066	+				-0.6
1,810,068	+				-0.5
1,810,286	-		OLJFJH_08835	0.17	-0.4
1,810,331	+		OLJFJH_08835	0.22	-0.8
1,810,483	+		OLJFJH_08835	0.39	-0.2
1,810,706	+		OLJFJH_08835	0.64	+1.2
1,810,707	-		OLJFJH_08835	0.64	-1.0
1,810,818	+		OLJFJH_08835	0.77	-2.3
1,810,930	+		OLJFJH_08835	0.89	-0.8
1,810,930	+		OLJFJH_08835	0.89	-2.0
1,810,931	-		OLJFJH_08835	0.89	+0.9
1,810,931	-		OLJFJH_08835	0.89	-0.5
1,810,934	-		OLJFJH_08835	0.89	+0.2
1,810,965	+				-0.3
1,810,965	+				-1.4
1,810,965	+				-3.8
1,810,966	-				-0.5
1,810,967	+				-1.4
1,810,967	+				-2.2
1,811,047	+				+0.9
1,811,047	+				-0.1
1,811,047	+				+0.0
1,811,047	+				-1.0
1,811,047	+				+2.3
1,811,047	+				+0.2
1,811,048	-				+1.2
1,811,048	-				-0.5
1,811,048	-				-0.1
1,811,049	+				-1.1
1,811,049	+				+1.4
1,811,067	+				-0.3
1,811,067	+				+0.8
1,811,067	+				+0.3
1,811,067	+				+0.5
1,811,068	-				-0.1
1,811,068	-				-1.2
1,811,068	-				+1.8
1,811,068	-				-0.8
1,811,068	-				-0.0
1,811,068	-				-0.9
1,811,084	+				+0.6
1,811,092	-				-0.2
1,811,101	-				+0.5
1,811,101	-				-0.2
1,811,104	-				-1.0
1,811,104	-				-0.6
1,811,146	+		OLJFJH_08840	0.10	+1.1
1,811,147	-		OLJFJH_08840	0.11	-0.7
1,811,175	+		OLJFJH_08840	0.15	+0.3
1,811,175	+		OLJFJH_08840	0.15	+0.8
1,811,176	-		OLJFJH_08840	0.15	+0.7
1,811,242	-		OLJFJH_08840	0.24	+3.3
1,811,242	-		OLJFJH_08840	0.24	+1.0
1,811,246	+		OLJFJH_08840	0.25	+0.3
1,811,246	+		OLJFJH_08840	0.25	+2.1
1,811,246	+		OLJFJH_08840	0.25	+0.3
1,811,247	-		OLJFJH_08840	0.25	+0.9
1,811,247	-		OLJFJH_08840	0.25	-0.9
1,811,289	-		OLJFJH_08840	0.31	-0.2
1,811,289	-		OLJFJH_08840	0.31	-0.2
1,811,375	+		OLJFJH_08840	0.43	+1.1
1,811,396	+		OLJFJH_08840	0.46	-0.6
1,811,397	-		OLJFJH_08840	0.46	-2.4
1,811,397	-		OLJFJH_08840	0.46	-0.8
1,811,420	-		OLJFJH_08840	0.49	-0.3
1,811,465	+		OLJFJH_08840	0.56	-1.5
1,811,645	+		OLJFJH_08840	0.81	+0.2
1,811,646	-		OLJFJH_08840	0.81	-1.1
1,811,647	+		OLJFJH_08840	0.82	+1.0
1,811,647	+		OLJFJH_08840	0.82	-1.1
1,811,647	+		OLJFJH_08840	0.82	-3.1
1,811,647	+		OLJFJH_08840	0.82	+1.8
1,811,647	+		OLJFJH_08840	0.82	-0.2
1,811,647	+		OLJFJH_08840	0.82	+0.6
1,811,648	-		OLJFJH_08840	0.82	+0.3
1,811,648	-		OLJFJH_08840	0.82	-1.3
1,811,648	-		OLJFJH_08840	0.82	-0.3
1,811,648	-		OLJFJH_08840	0.82	+4.5
1,811,648	-		OLJFJH_08840	0.82	+0.8
1,811,648	-		OLJFJH_08840	0.82	+2.0
1,811,648	-		OLJFJH_08840	0.82	+1.0
1,811,686	+		OLJFJH_08840	0.87	+0.3
1,811,790	+				-0.6
1,812,003	+		OLJFJH_08845	0.13	-0.1
1,812,003	+		OLJFJH_08845	0.13	-1.6
1,812,003	+		OLJFJH_08845	0.13	-0.3
1,812,004	-		OLJFJH_08845	0.13	-0.3