Strain Fitness in Erwinia amylovora T8 around OLJFJH_05105

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
1,013,305	+		OLJFJH_05100	0.29	+1.9
1,013,306	-		OLJFJH_05100	0.29	+1.7
1,013,306	-		OLJFJH_05100	0.29	+0.3
1,013,350	-		OLJFJH_05100	0.33	-1.0
1,013,442	+		OLJFJH_05100	0.40	-0.5
1,013,442	+		OLJFJH_05100	0.40	-0.5
1,013,443	-		OLJFJH_05100	0.40	+0.2
1,013,443	-		OLJFJH_05100	0.40	-0.0
1,013,445	+		OLJFJH_05100	0.40	+0.5
1,013,599	+		OLJFJH_05100	0.52	+0.2
1,013,599	+		OLJFJH_05100	0.52	-0.2
1,013,600	-		OLJFJH_05100	0.52	+0.4
1,013,600	-		OLJFJH_05100	0.52	-0.8
1,013,600	-		OLJFJH_05100	0.52	-1.1
1,013,805	+		OLJFJH_05100	0.68	+0.0
1,013,811	-		OLJFJH_05100	0.68	+0.3
1,013,825	+		OLJFJH_05100	0.70	-0.2
1,013,826	-		OLJFJH_05100	0.70	+0.5
1,013,826	-		OLJFJH_05100	0.70	+0.7
1,013,826	-		OLJFJH_05100	0.70	+0.4
1,013,875	+		OLJFJH_05100	0.73	+1.1
1,013,908	+		OLJFJH_05100	0.76	+0.0
1,013,941	+		OLJFJH_05100	0.79	+1.1
1,013,941	+		OLJFJH_05100	0.79	+0.4
1,013,941	+		OLJFJH_05100	0.79	-0.6
1,013,941	+		OLJFJH_05100	0.79	-0.4
1,013,942	-		OLJFJH_05100	0.79	+0.9
1,013,942	-		OLJFJH_05100	0.79	-0.1
1,013,942	-		OLJFJH_05100	0.79	-2.8
1,013,942	-		OLJFJH_05100	0.79	-0.4
1,014,106	+				-0.6
1,014,106	+				-0.5
1,014,106	+				+0.6
1,014,106	+				+0.2
1,014,107	-				-0.1
1,014,289	+				-1.8
1,014,291	+				+0.1
1,014,291	+				-2.7
1,014,292	-				-2.0
1,014,292	-				-2.8
1,014,329	+				-2.7
1,014,329	+				-0.6
1,014,330	-				-1.6
1,014,370	-		OLJFJH_05105	0.11	-2.2
1,014,623	+		OLJFJH_05105	0.37	-2.1
1,014,624	-		OLJFJH_05105	0.37	-4.7
1,014,624	-		OLJFJH_05105	0.37	-2.0
1,014,624	-		OLJFJH_05105	0.37	-2.3
1,014,666	+		OLJFJH_05105	0.41	-4.4
1,014,667	-		OLJFJH_05105	0.41	-2.6
1,014,667	-		OLJFJH_05105	0.41	-1.3
1,014,703	-		OLJFJH_05105	0.45	-1.8
1,014,703	-		OLJFJH_05105	0.45	-2.9
1,014,788	-		OLJFJH_05105	0.54	-0.2
1,015,122	+		OLJFJH_05105	0.88	-1.9
1,015,264	+				-0.5
1,015,265	-				-0.1
1,015,316	+				+1.0
1,015,316	+				-2.0
1,015,317	-				-0.8
1,015,318	+				-0.3
1,015,365	+				+0.2
1,015,385	+				+0.0
1,015,385	+				-1.0
1,015,422	+				-0.9
1,015,505	+				+0.4
1,015,506	-				-0.6
1,015,506	-				+3.2
1,015,506	-				+2.0
1,015,506	-				+1.5
1,015,509	+				-0.5
1,015,509	+				+1.1
1,015,509	+				-0.5
1,015,547	+				-1.3
1,015,547	+				+0.4
1,015,593	+		OLJFJH_05110	0.29	+0.1
1,015,594	-		OLJFJH_05110	0.29	-0.0
1,015,594	-		OLJFJH_05110	0.29	-0.2
1,015,594	-		OLJFJH_05110	0.29	+0.3
1,015,594	-		OLJFJH_05110	0.29	-0.8
1,015,659	+		OLJFJH_05110	0.60	+1.0
1,015,660	-		OLJFJH_05110	0.60	+0.9
1,015,732	-				+0.0
1,015,745	+				+3.8
1,015,749	-				+0.9
1,015,804	+				-0.7
1,015,804	+				-0.4
1,015,804	+				+0.3
1,015,807	-				+0.3
1,015,815	+				+0.8
1,015,816	-				-0.7
1,016,008	+				-0.0
1,016,009	-				+0.8
1,016,043	+		OLJFJH_05115	0.12	-1.1
1,016,044	-		OLJFJH_05115	0.12	-0.1
1,016,092	+		OLJFJH_05115	0.16	+1.6
1,016,092	+		OLJFJH_05115	0.16	+1.1
1,016,093	-		OLJFJH_05115	0.16	-0.1
1,016,093	-		OLJFJH_05115	0.16	-1.5
1,016,096	+		OLJFJH_05115	0.17	-1.4
1,016,096	+		OLJFJH_05115	0.17	+0.9
1,016,097	-		OLJFJH_05115	0.17	-0.3
1,016,097	-		OLJFJH_05115	0.17	+3.5
1,016,097	-		OLJFJH_05115	0.17	+0.4
1,016,097	-		OLJFJH_05115	0.17	-0.2
1,016,122	+		OLJFJH_05115	0.19	-0.5
1,016,122	+		OLJFJH_05115	0.19	+0.5
1,016,123	-		OLJFJH_05115	0.19	-0.0
1,016,133	-		OLJFJH_05115	0.20	-0.6
1,016,133	-		OLJFJH_05115	0.20	-0.1
1,016,139	-		OLJFJH_05115	0.20	+0.3