Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04300 and OLJFJH_04305 are separated by 159 nucleotides OLJFJH_04305 and OLJFJH_04310 are separated by 72 nucleotides OLJFJH_04310 and OLJFJH_04315 overlap by 4 nucleotides
OLJFJH_04300: OLJFJH_04300 - gamma-glutamyltransferase, at 828,267 to 830,018
_04300
OLJFJH_04305: OLJFJH_04305 - DUF2756 domain-containing protein, at 830,178 to 830,465
_04305
OLJFJH_04310: OLJFJH_04310 - glycerophosphodiester phosphodiesterase, at 830,538 to 831,278
_04310
OLJFJH_04315: OLJFJH_04315 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 831,275 to 832,348
_04315
Position (kb) 830
831 Strain fitness (log2 ratio) -2
-1
0
1 at 829.184 kb on + strand, within OLJFJH_04300 at 829.191 kb on + strand, within OLJFJH_04300 at 829.202 kb on - strand, within OLJFJH_04300 at 829.282 kb on + strand, within OLJFJH_04300 at 829.283 kb on - strand, within OLJFJH_04300 at 829.283 kb on - strand, within OLJFJH_04300 at 829.283 kb on - strand, within OLJFJH_04300 at 829.428 kb on - strand, within OLJFJH_04300 at 829.432 kb on + strand, within OLJFJH_04300 at 829.531 kb on + strand, within OLJFJH_04300 at 829.640 kb on + strand, within OLJFJH_04300 at 829.640 kb on + strand, within OLJFJH_04300 at 829.640 kb on + strand, within OLJFJH_04300 at 829.640 kb on + strand, within OLJFJH_04300 at 829.692 kb on - strand, within OLJFJH_04300 at 829.718 kb on + strand, within OLJFJH_04300 at 829.718 kb on + strand, within OLJFJH_04300 at 829.929 kb on - strand at 830.034 kb on - strand at 830.046 kb on - strand at 830.070 kb on + strand at 830.071 kb on - strand at 830.077 kb on - strand at 830.144 kb on + strand at 830.145 kb on - strand at 830.156 kb on + strand at 830.381 kb on + strand, within OLJFJH_04305 at 830.556 kb on + strand at 830.557 kb on - strand at 830.567 kb on + strand at 830.567 kb on + strand at 830.567 kb on + strand at 830.627 kb on + strand, within OLJFJH_04310 at 830.720 kb on + strand, within OLJFJH_04310 at 830.720 kb on + strand, within OLJFJH_04310 at 831.210 kb on - strand at 831.448 kb on + strand, within OLJFJH_04315 at 831.449 kb on - strand, within OLJFJH_04315
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4 remove 829,184 + OLJFJH_04300 0.52 +0.3 829,191 + OLJFJH_04300 0.53 -0.2 829,202 - OLJFJH_04300 0.53 -0.2 829,282 + OLJFJH_04300 0.58 -1.0 829,283 - OLJFJH_04300 0.58 +0.6 829,283 - OLJFJH_04300 0.58 -1.3 829,283 - OLJFJH_04300 0.58 -1.8 829,428 - OLJFJH_04300 0.66 -0.1 829,432 + OLJFJH_04300 0.66 -0.1 829,531 + OLJFJH_04300 0.72 -1.6 829,640 + OLJFJH_04300 0.78 +0.5 829,640 + OLJFJH_04300 0.78 -0.8 829,640 + OLJFJH_04300 0.78 -0.2 829,640 + OLJFJH_04300 0.78 +0.2 829,692 - OLJFJH_04300 0.81 -0.4 829,718 + OLJFJH_04300 0.83 -1.7 829,718 + OLJFJH_04300 0.83 +0.2 829,929 - -0.2 830,034 - -1.0 830,046 - -0.2 830,070 + -1.3 830,071 - +0.1 830,077 - -0.3 830,144 + -0.7 830,145 - +0.6 830,156 + -0.4 830,381 + OLJFJH_04305 0.70 -1.6 830,556 + +0.2 830,557 - +0.6 830,567 + -2.0 830,567 + +1.6 830,567 + -1.0 830,627 + OLJFJH_04310 0.12 +0.7 830,720 + OLJFJH_04310 0.25 -0.7 830,720 + OLJFJH_04310 0.25 +0.7 831,210 - -0.1 831,448 + OLJFJH_04315 0.16 -0.0 831,449 - OLJFJH_04315 0.16 -0.2
Or see this region's nucleotide sequence