Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_03705 and OLJFJH_03710 are separated by 125 nucleotides OLJFJH_03710 and OLJFJH_03715 are separated by 23 nucleotides OLJFJH_03715 and OLJFJH_03720 are separated by 17 nucleotides
OLJFJH_03705: OLJFJH_03705 - DNA-protecting protein DprA, at 717,399 to 718,523
_03705
OLJFJH_03710: OLJFJH_03710 - peptide deformylase, at 718,649 to 719,158
_03710
OLJFJH_03715: OLJFJH_03715 - methionyl-tRNA formyltransferase, at 719,182 to 720,129
_03715
OLJFJH_03720: OLJFJH_03720 - 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB, at 720,147 to 721,469
_03720
Position (kb) 718
719
720 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 717.689 kb on + strand, within OLJFJH_03705 at 717.690 kb on - strand, within OLJFJH_03705 at 717.690 kb on - strand, within OLJFJH_03705 at 717.692 kb on + strand, within OLJFJH_03705 at 717.693 kb on - strand, within OLJFJH_03705 at 717.693 kb on - strand, within OLJFJH_03705 at 717.695 kb on + strand, within OLJFJH_03705 at 717.695 kb on + strand, within OLJFJH_03705 at 717.696 kb on - strand, within OLJFJH_03705 at 717.696 kb on - strand, within OLJFJH_03705 at 717.696 kb on - strand, within OLJFJH_03705 at 717.782 kb on - strand, within OLJFJH_03705 at 717.849 kb on + strand, within OLJFJH_03705 at 717.849 kb on + strand, within OLJFJH_03705 at 717.850 kb on - strand, within OLJFJH_03705 at 717.881 kb on + strand, within OLJFJH_03705 at 717.881 kb on + strand, within OLJFJH_03705 at 718.082 kb on + strand, within OLJFJH_03705 at 718.083 kb on - strand, within OLJFJH_03705 at 718.086 kb on + strand, within OLJFJH_03705 at 718.086 kb on + strand, within OLJFJH_03705 at 718.087 kb on - strand, within OLJFJH_03705 at 718.087 kb on - strand, within OLJFJH_03705 at 718.087 kb on - strand, within OLJFJH_03705 at 718.087 kb on - strand, within OLJFJH_03705 at 718.087 kb on - strand, within OLJFJH_03705 at 718.087 kb on - strand, within OLJFJH_03705 at 718.107 kb on - strand, within OLJFJH_03705 at 718.110 kb on + strand, within OLJFJH_03705 at 718.119 kb on + strand, within OLJFJH_03705 at 718.119 kb on + strand, within OLJFJH_03705 at 718.120 kb on - strand, within OLJFJH_03705 at 718.163 kb on - strand, within OLJFJH_03705 at 718.213 kb on - strand, within OLJFJH_03705 at 718.441 kb on - strand at 719.084 kb on + strand, within OLJFJH_03710 at 720.130 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4 remove 717,689 + OLJFJH_03705 0.26 +1.1 717,690 - OLJFJH_03705 0.26 -0.4 717,690 - OLJFJH_03705 0.26 -0.7 717,692 + OLJFJH_03705 0.26 -0.3 717,693 - OLJFJH_03705 0.26 -0.5 717,693 - OLJFJH_03705 0.26 +0.1 717,695 + OLJFJH_03705 0.26 +1.4 717,695 + OLJFJH_03705 0.26 -0.5 717,696 - OLJFJH_03705 0.26 +0.6 717,696 - OLJFJH_03705 0.26 -0.2 717,696 - OLJFJH_03705 0.26 -1.3 717,782 - OLJFJH_03705 0.34 +0.1 717,849 + OLJFJH_03705 0.40 -1.4 717,849 + OLJFJH_03705 0.40 -0.5 717,850 - OLJFJH_03705 0.40 -0.6 717,881 + OLJFJH_03705 0.43 -0.6 717,881 + OLJFJH_03705 0.43 -0.5 718,082 + OLJFJH_03705 0.61 -1.0 718,083 - OLJFJH_03705 0.61 +0.1 718,086 + OLJFJH_03705 0.61 +1.1 718,086 + OLJFJH_03705 0.61 +0.0 718,087 - OLJFJH_03705 0.61 +0.5 718,087 - OLJFJH_03705 0.61 -1.2 718,087 - OLJFJH_03705 0.61 -2.9 718,087 - OLJFJH_03705 0.61 +0.8 718,087 - OLJFJH_03705 0.61 -1.8 718,087 - OLJFJH_03705 0.61 -1.4 718,107 - OLJFJH_03705 0.63 -1.8 718,110 + OLJFJH_03705 0.63 +0.1 718,119 + OLJFJH_03705 0.64 -0.8 718,119 + OLJFJH_03705 0.64 -3.2 718,120 - OLJFJH_03705 0.64 -1.4 718,163 - OLJFJH_03705 0.68 +2.4 718,213 - OLJFJH_03705 0.72 -0.4 718,441 - -0.2 719,084 + OLJFJH_03710 0.85 -1.5 720,130 + -0.0
Or see this region's nucleotide sequence