Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_03265 and OLJFJH_03270 are separated by 96 nucleotides OLJFJH_03270 and OLJFJH_03275 are separated by 570 nucleotides
OLJFJH_03265: OLJFJH_03265 - NAD-dependent dehydratase, at 613,236 to 614,306
_03265
OLJFJH_03270: OLJFJH_03270 - LysR family transcriptional regulator, at 614,403 to 615,311
_03270
OLJFJH_03275: OLJFJH_03275 - hypothetical protein, at 615,882 to 616,334
_03275
Position (kb)
614
615
616 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 613.433 kb on - strand, within OLJFJH_03265 at 613.569 kb on + strand, within OLJFJH_03265 at 613.570 kb on - strand, within OLJFJH_03265 at 613.589 kb on + strand, within OLJFJH_03265 at 613.590 kb on - strand, within OLJFJH_03265 at 613.591 kb on + strand, within OLJFJH_03265 at 613.592 kb on - strand, within OLJFJH_03265 at 613.592 kb on - strand, within OLJFJH_03265 at 613.742 kb on - strand, within OLJFJH_03265 at 613.831 kb on + strand, within OLJFJH_03265 at 613.832 kb on - strand, within OLJFJH_03265 at 613.832 kb on - strand, within OLJFJH_03265 at 613.832 kb on - strand, within OLJFJH_03265 at 613.870 kb on + strand, within OLJFJH_03265 at 613.870 kb on + strand, within OLJFJH_03265 at 613.870 kb on + strand, within OLJFJH_03265 at 613.871 kb on - strand, within OLJFJH_03265 at 613.871 kb on - strand, within OLJFJH_03265 at 613.873 kb on + strand, within OLJFJH_03265 at 613.873 kb on + strand, within OLJFJH_03265 at 613.874 kb on - strand, within OLJFJH_03265 at 613.874 kb on - strand, within OLJFJH_03265 at 613.874 kb on - strand, within OLJFJH_03265 at 613.874 kb on - strand, within OLJFJH_03265 at 613.964 kb on - strand, within OLJFJH_03265 at 614.121 kb on - strand, within OLJFJH_03265 at 614.131 kb on - strand, within OLJFJH_03265 at 614.289 kb on + strand at 614.290 kb on - strand at 614.290 kb on - strand at 614.344 kb on - strand at 614.363 kb on + strand at 614.371 kb on - strand at 614.382 kb on - strand at 614.611 kb on - strand, within OLJFJH_03270 at 614.611 kb on - strand, within OLJFJH_03270 at 614.783 kb on + strand, within OLJFJH_03270 at 614.846 kb on + strand, within OLJFJH_03270 at 615.056 kb on + strand, within OLJFJH_03270 at 615.056 kb on + strand, within OLJFJH_03270 at 615.057 kb on - strand, within OLJFJH_03270 at 615.063 kb on - strand, within OLJFJH_03270 at 615.229 kb on - strand at 615.285 kb on - strand at 615.298 kb on + strand at 615.298 kb on + strand at 615.330 kb on - strand at 615.330 kb on - strand at 615.330 kb on - strand at 615.369 kb on + strand at 615.386 kb on + strand at 615.432 kb on + strand at 615.433 kb on - strand at 615.463 kb on + strand at 615.464 kb on - strand at 615.464 kb on - strand at 615.464 kb on - strand at 615.487 kb on + strand at 615.488 kb on - strand at 615.488 kb on - strand at 615.501 kb on - strand at 615.501 kb on - strand at 615.585 kb on - strand at 615.585 kb on - strand at 615.636 kb on + strand at 615.640 kb on + strand at 615.660 kb on + strand at 615.660 kb on + strand at 615.660 kb on + strand at 615.661 kb on - strand at 615.663 kb on - strand at 615.680 kb on - strand at 615.824 kb on + strand at 615.842 kb on + strand at 615.882 kb on - strand at 615.906 kb on - strand at 615.930 kb on + strand, within OLJFJH_03275 at 615.930 kb on + strand, within OLJFJH_03275 at 615.932 kb on + strand, within OLJFJH_03275 at 615.978 kb on - strand, within OLJFJH_03275 at 616.029 kb on - strand, within OLJFJH_03275 at 616.066 kb on + strand, within OLJFJH_03275 at 616.067 kb on - strand, within OLJFJH_03275 at 616.067 kb on - strand, within OLJFJH_03275 at 616.175 kb on - strand, within OLJFJH_03275 at 616.197 kb on + strand, within OLJFJH_03275 at 616.198 kb on - strand, within OLJFJH_03275 at 616.198 kb on - strand, within OLJFJH_03275 at 616.255 kb on + strand, within OLJFJH_03275 at 616.255 kb on + strand, within OLJFJH_03275 at 616.256 kb on - strand, within OLJFJH_03275 at 616.256 kb on - strand, within OLJFJH_03275 at 616.256 kb on - strand, within OLJFJH_03275 at 616.256 kb on - strand, within OLJFJH_03275 at 616.273 kb on + strand, within OLJFJH_03275 at 616.305 kb on + strand at 616.305 kb on + strand at 616.305 kb on + strand at 616.305 kb on + strand at 616.306 kb on - strand at 616.306 kb on - strand at 616.306 kb on - strand at 616.306 kb on - strand at 616.306 kb on - strand at 616.308 kb on - strand at 616.309 kb on + strand at 616.309 kb on + strand at 616.309 kb on + strand at 616.310 kb on - strand at 616.310 kb on - strand at 616.310 kb on - strand at 616.310 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4 remove 613,433 - OLJFJH_03265 0.18 +0.1 613,569 + OLJFJH_03265 0.31 +1.0 613,570 - OLJFJH_03265 0.31 -0.5 613,589 + OLJFJH_03265 0.33 +0.6 613,590 - OLJFJH_03265 0.33 -0.6 613,591 + OLJFJH_03265 0.33 -1.0 613,592 - OLJFJH_03265 0.33 +0.5 613,592 - OLJFJH_03265 0.33 -0.3 613,742 - OLJFJH_03265 0.47 -0.9 613,831 + OLJFJH_03265 0.56 -0.3 613,832 - OLJFJH_03265 0.56 +1.7 613,832 - OLJFJH_03265 0.56 -0.9 613,832 - OLJFJH_03265 0.56 +1.3 613,870 + OLJFJH_03265 0.59 -0.5 613,870 + OLJFJH_03265 0.59 +1.7 613,870 + OLJFJH_03265 0.59 +0.2 613,871 - OLJFJH_03265 0.59 +0.5 613,871 - OLJFJH_03265 0.59 -0.2 613,873 + OLJFJH_03265 0.59 -1.0 613,873 + OLJFJH_03265 0.59 -0.1 613,874 - OLJFJH_03265 0.60 +0.5 613,874 - OLJFJH_03265 0.60 +0.3 613,874 - OLJFJH_03265 0.60 -0.6 613,874 - OLJFJH_03265 0.60 +0.3 613,964 - OLJFJH_03265 0.68 -0.2 614,121 - OLJFJH_03265 0.83 -0.5 614,131 - OLJFJH_03265 0.84 +0.4 614,289 + -1.8 614,290 - -0.5 614,290 - -0.1 614,344 - -0.5 614,363 + -0.8 614,371 - +0.6 614,382 - +0.5 614,611 - OLJFJH_03270 0.23 +0.2 614,611 - OLJFJH_03270 0.23 +4.9 614,783 + OLJFJH_03270 0.42 -0.9 614,846 + OLJFJH_03270 0.49 +1.0 615,056 + OLJFJH_03270 0.72 +0.5 615,056 + OLJFJH_03270 0.72 -0.1 615,057 - OLJFJH_03270 0.72 -0.3 615,063 - OLJFJH_03270 0.73 -0.8 615,229 - +0.9 615,285 - -0.8 615,298 + +0.1 615,298 + +0.0 615,330 - +0.7 615,330 - +0.6 615,330 - -1.9 615,369 + -1.1 615,386 + -0.5 615,432 + +0.3 615,433 - +0.7 615,463 + -0.0 615,464 - -1.5 615,464 - -0.5 615,464 - -0.1 615,487 + -0.5 615,488 - -0.3 615,488 - -0.4 615,501 - +0.2 615,501 - -0.2 615,585 - -0.7 615,585 - -0.5 615,636 + -0.9 615,640 + +0.5 615,660 + +0.2 615,660 + +0.0 615,660 + -0.2 615,661 - -0.3 615,663 - -1.5 615,680 - -0.1 615,824 + +0.1 615,842 + +0.3 615,882 - +0.8 615,906 - +0.1 615,930 + OLJFJH_03275 0.11 +0.8 615,930 + OLJFJH_03275 0.11 -0.6 615,932 + OLJFJH_03275 0.11 -0.8 615,978 - OLJFJH_03275 0.21 -0.4 616,029 - OLJFJH_03275 0.32 +1.1 616,066 + OLJFJH_03275 0.41 -0.3 616,067 - OLJFJH_03275 0.41 -1.6 616,067 - OLJFJH_03275 0.41 +0.8 616,175 - OLJFJH_03275 0.65 -1.7 616,197 + OLJFJH_03275 0.70 -0.3 616,198 - OLJFJH_03275 0.70 +0.5 616,198 - OLJFJH_03275 0.70 -0.1 616,255 + OLJFJH_03275 0.82 +1.2 616,255 + OLJFJH_03275 0.82 +0.5 616,256 - OLJFJH_03275 0.83 -0.3 616,256 - OLJFJH_03275 0.83 +0.8 616,256 - OLJFJH_03275 0.83 -0.6 616,256 - OLJFJH_03275 0.83 +1.4 616,273 + OLJFJH_03275 0.86 -0.6 616,305 + -1.0 616,305 + -1.3 616,305 + +0.1 616,305 + -0.1 616,306 - -0.2 616,306 - +1.1 616,306 - -0.1 616,306 - +0.8 616,306 - +0.5 616,308 - -0.9 616,309 + +0.3 616,309 + -0.1 616,309 + +0.3 616,310 - +0.5 616,310 - -0.2 616,310 - -0.2 616,310 - -0.5
Or see this region's nucleotide sequence