Strain Fitness in Erwinia amylovora T8 around OLJFJH_13920

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-3
2,932,136	-				-0.2
2,932,204	-				-0.1
2,932,589	+		OLJFJH_13915	0.65	-1.1
2,932,589	+		OLJFJH_13915	0.65	+0.8
2,932,594	+		OLJFJH_13915	0.66	+0.0
2,932,621	+		OLJFJH_13915	0.72	+0.8
2,932,680	-		OLJFJH_13915	0.85	-1.7
2,932,755	+				+0.5
2,933,003	+				+0.4
2,933,058	-		OLJFJH_13920	0.15	+0.2
2,933,058	-		OLJFJH_13920	0.15	+2.4
2,933,072	+		OLJFJH_13920	0.16	+0.0
2,933,220	+		OLJFJH_13920	0.32	-0.0
2,933,257	+		OLJFJH_13920	0.36	+0.2
2,933,258	-		OLJFJH_13920	0.36	+0.9
2,933,260	+		OLJFJH_13920	0.36	+1.3
2,933,493	-		OLJFJH_13920	0.60	+1.0
2,933,606	-		OLJFJH_13920	0.72	+1.3
2,933,606	-		OLJFJH_13920	0.72	+0.0
2,933,608	+		OLJFJH_13920	0.72	+0.4
2,933,634	+		OLJFJH_13920	0.75	-0.1
2,933,634	+		OLJFJH_13920	0.75	-0.8
2,933,635	-		OLJFJH_13920	0.75	-0.5
2,933,635	-		OLJFJH_13920	0.75	+0.2
2,933,635	-		OLJFJH_13920	0.75	-1.0
2,933,635	-		OLJFJH_13920	0.75	-0.8
2,933,635	-		OLJFJH_13920	0.75	+0.9
2,933,745	+		OLJFJH_13920	0.87	-0.2
2,933,851	+				+0.1
2,933,906	+				+0.8
2,933,907	-				+0.1
2,933,943	+				+0.2
2,934,046	-				+0.6
2,934,047	+				+0.0
2,934,047	+				-1.0
2,934,048	-				-0.2
2,934,048	-				-0.3
2,934,048	-				+1.0
2,934,154	-		OLJFJH_13925	0.23	+0.1
2,934,212	+		OLJFJH_13925	0.30	+1.0
2,934,213	-		OLJFJH_13925	0.30	+0.4
2,934,216	+		OLJFJH_13925	0.31	+0.5
2,934,282	+		OLJFJH_13925	0.40	+0.8
2,934,468	+		OLJFJH_13925	0.64	+0.7
2,934,530	+		OLJFJH_13925	0.72	+0.4
2,934,530	+		OLJFJH_13925	0.72	-0.4
2,934,530	+		OLJFJH_13925	0.72	+0.7
2,934,531	-		OLJFJH_13925	0.72	+0.3
2,934,531	-		OLJFJH_13925	0.72	-0.5
2,934,666	+				+0.1
2,934,667	-				+0.2
2,934,667	-				+0.6
2,934,738	+				-0.2
2,934,743	+				+0.5
2,934,778	-				-0.6
2,934,779	-				+0.0
2,934,822	+				+2.0