Strain Fitness in Erwinia amylovora T8 around OLJFJH_05995

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-3
1,205,212	-		OLJFJH_05980	0.75	-0.7
1,205,227	-		OLJFJH_05980	0.77	+0.1
1,205,343	+				+0.0
1,205,343	+				+0.3
1,205,347	-				-0.3
1,205,400	+				-0.6
1,205,410	+				+0.6
1,205,421	+				-0.4
1,205,421	+				+0.6
1,205,462	-				+0.1
1,205,472	-				+0.2
1,205,474	+				-0.2
1,205,477	+				-0.1
1,205,477	+				-0.3
1,205,478	-				+2.0
1,205,484	+				-0.1
1,205,484	+				+0.2
1,205,485	-				-0.5
1,205,485	-				+0.0
1,205,508	+				-0.3
1,205,508	+				-0.0
1,205,509	-				-0.2
1,205,514	+				-0.2
1,205,514	+				+0.4
1,205,514	+				-0.2
1,205,515	-				+0.9
1,205,515	-				-0.4
1,205,515	-				+1.2
1,205,588	+				-0.2
1,205,588	+				-0.1
1,205,590	+				+0.3
1,205,590	+				-0.0
1,205,590	+				-0.2
1,205,591	-				+0.9
1,205,636	+				-0.0
1,205,637	-				-0.4
1,205,637	-				+0.3
1,205,637	-				+1.3
1,205,674	+				-0.3
1,205,676	+				+0.8
1,205,676	+				-0.1
1,205,676	+				-0.6
1,205,676	+				+0.4
1,205,677	-				+0.8
1,205,677	-				+0.9
1,205,822	+		OLJFJH_05985	0.33	-0.3
1,205,822	+		OLJFJH_05985	0.33	+0.0
1,205,823	-		OLJFJH_05985	0.34	-0.8
1,205,841	+		OLJFJH_05985	0.44	-0.7
1,205,842	-		OLJFJH_05985	0.45	+0.8
1,205,887	+		OLJFJH_05985	0.70	+0.1
1,205,887	+		OLJFJH_05985	0.70	-0.8
1,205,887	+		OLJFJH_05985	0.70	+0.3
1,205,887	+		OLJFJH_05985	0.70	-0.0
1,205,888	-		OLJFJH_05985	0.71	+0.0
1,205,888	-		OLJFJH_05985	0.71	+0.4
1,205,980	-		OLJFJH_05990	0.27	-0.7
1,206,033	-				-0.6
1,206,099	-				-0.3
1,206,276	+		OLJFJH_05995	0.16	-0.4
1,206,330	+		OLJFJH_05995	0.19	-0.1
1,206,331	-		OLJFJH_05995	0.19	-0.3
1,206,331	-		OLJFJH_05995	0.19	+0.2
1,206,446	+		OLJFJH_05995	0.27	-0.9
1,206,503	+		OLJFJH_05995	0.30	-0.2
1,206,503	+		OLJFJH_05995	0.30	-1.7
1,206,522	+		OLJFJH_05995	0.31	-0.4
1,206,579	+		OLJFJH_05995	0.35	+0.6
1,206,622	-		OLJFJH_05995	0.38	-0.5
1,206,715	-		OLJFJH_05995	0.44	-0.4
1,206,719	+		OLJFJH_05995	0.44	-0.5
1,206,719	+		OLJFJH_05995	0.44	+0.5
1,206,719	+		OLJFJH_05995	0.44	+0.2
1,206,719	+		OLJFJH_05995	0.44	+0.1
1,206,719	+		OLJFJH_05995	0.44	-0.3
1,206,719	+		OLJFJH_05995	0.44	+0.5
1,206,719	+		OLJFJH_05995	0.44	+0.2
1,206,719	+		OLJFJH_05995	0.44	+0.6
1,206,720	-		OLJFJH_05995	0.44	-0.3
1,206,720	-		OLJFJH_05995	0.44	-1.0
1,206,798	-		OLJFJH_05995	0.49	+0.3
1,206,869	+		OLJFJH_05995	0.54	-1.8
1,206,869	+		OLJFJH_05995	0.54	-0.2
1,206,869	+		OLJFJH_05995	0.54	-0.5
1,206,869	+		OLJFJH_05995	0.54	-1.3
1,206,869	+		OLJFJH_05995	0.54	+0.2
1,206,870	-		OLJFJH_05995	0.54	-3.1
1,206,952	+		OLJFJH_05995	0.59	-0.9
1,206,952	+		OLJFJH_05995	0.59	-1.0
1,206,952	+		OLJFJH_05995	0.59	-1.6
1,206,962	-		OLJFJH_05995	0.60	+0.3
1,207,003	+		OLJFJH_05995	0.62	-0.4
1,207,087	-		OLJFJH_05995	0.68	-1.7
1,207,156	-		OLJFJH_05995	0.72	+0.2
1,207,239	+		OLJFJH_05995	0.77	-0.9
1,207,240	-		OLJFJH_05995	0.77	+0.3
1,207,284	+		OLJFJH_05995	0.80	+0.3
1,207,285	-		OLJFJH_05995	0.80	-0.5
1,207,388	+		OLJFJH_05995	0.87	-0.6
1,207,388	+		OLJFJH_05995	0.87	-0.5
1,207,388	+		OLJFJH_05995	0.87	-0.5
1,207,389	-		OLJFJH_05995	0.87	+0.0
1,207,389	-		OLJFJH_05995	0.87	-0.4
1,207,389	-		OLJFJH_05995	0.87	-1.1
1,207,474	+				-0.2
1,207,475	-				+0.0
1,207,514	+				-0.3
1,207,514	+				+0.0
1,207,514	+				-0.3
1,207,515	-				+0.1
1,207,518	+				-0.4
1,207,555	+				+0.4
1,207,556	-				-0.2
1,207,558	+				-0.7
1,207,558	+				+0.5
1,207,559	-				+0.0
1,207,758	-				+0.1
1,207,826	-		OLJFJH_06000	0.31	+0.5
1,207,845	-		OLJFJH_06000	0.38	+0.2