Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_03510 and OLJFJH_03515 are separated by 394 nucleotides OLJFJH_03515 and OLJFJH_03520 are separated by 54 nucleotides OLJFJH_03520 and OLJFJH_03525 are separated by 421 nucleotides
OLJFJH_03510: OLJFJH_03510 - phage holin lambda family, at 678,819 to 679,136
_03510
OLJFJH_03515: OLJFJH_03515 - HicB-like domain-containing protein, at 679,531 to 679,944
_03515
OLJFJH_03520: OLJFJH_03520 - DNA modification methylase, at 679,999 to 680,538
_03520
OLJFJH_03525: OLJFJH_03525 - Conserved uncharacterized protein, at 680,960 to 681,970
_03525
Position (kb) 679
680
681 Strain fitness (log2 ratio) -2
-1
0
1
2 at 679.010 kb on - strand, within OLJFJH_03510 at 679.021 kb on - strand, within OLJFJH_03510 at 679.082 kb on + strand, within OLJFJH_03510 at 679.083 kb on - strand, within OLJFJH_03510 at 679.096 kb on + strand, within OLJFJH_03510 at 679.097 kb on - strand, within OLJFJH_03510 at 679.130 kb on + strand at 679.130 kb on + strand at 679.131 kb on - strand at 679.131 kb on - strand at 679.131 kb on - strand at 679.136 kb on + strand at 679.258 kb on + strand at 679.260 kb on + strand at 679.260 kb on + strand at 679.260 kb on + strand at 679.261 kb on - strand at 679.264 kb on + strand at 679.397 kb on + strand at 679.398 kb on - strand at 679.398 kb on - strand at 679.426 kb on - strand at 679.775 kb on + strand, within OLJFJH_03515 at 679.845 kb on - strand, within OLJFJH_03515 at 679.883 kb on - strand, within OLJFJH_03515 at 679.929 kb on - strand at 679.995 kb on + strand at 680.054 kb on - strand, within OLJFJH_03520 at 680.154 kb on + strand, within OLJFJH_03520 at 680.154 kb on + strand, within OLJFJH_03520 at 680.154 kb on + strand, within OLJFJH_03520 at 680.154 kb on + strand, within OLJFJH_03520 at 680.155 kb on - strand, within OLJFJH_03520 at 680.155 kb on - strand, within OLJFJH_03520 at 680.310 kb on + strand, within OLJFJH_03520 at 680.310 kb on + strand, within OLJFJH_03520 at 680.311 kb on - strand, within OLJFJH_03520 at 680.315 kb on - strand, within OLJFJH_03520 at 680.366 kb on + strand, within OLJFJH_03520 at 680.398 kb on - strand, within OLJFJH_03520 at 680.561 kb on + strand at 680.561 kb on + strand at 680.562 kb on - strand at 680.592 kb on + strand at 680.679 kb on - strand at 680.679 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-3 remove 679,010 - OLJFJH_03510 0.60 +0.5 679,021 - OLJFJH_03510 0.64 -0.6 679,082 + OLJFJH_03510 0.83 +0.4 679,083 - OLJFJH_03510 0.83 +0.6 679,096 + OLJFJH_03510 0.87 +0.2 679,097 - OLJFJH_03510 0.87 +0.0 679,130 + -0.1 679,130 + +0.2 679,131 - -0.1 679,131 - +0.6 679,131 - -0.7 679,136 + -0.1 679,258 + -0.1 679,260 + +0.2 679,260 + -0.1 679,260 + +0.8 679,261 - -0.5 679,264 + -2.1 679,397 + -0.7 679,398 - -0.3 679,398 - -0.8 679,426 - -0.8 679,775 + OLJFJH_03515 0.59 -0.1 679,845 - OLJFJH_03515 0.76 -0.1 679,883 - OLJFJH_03515 0.85 +0.1 679,929 - -0.6 679,995 + -0.0 680,054 - OLJFJH_03520 0.10 -2.4 680,154 + OLJFJH_03520 0.29 +0.1 680,154 + OLJFJH_03520 0.29 +0.4 680,154 + OLJFJH_03520 0.29 -0.6 680,154 + OLJFJH_03520 0.29 -1.2 680,155 - OLJFJH_03520 0.29 -1.0 680,155 - OLJFJH_03520 0.29 -0.0 680,310 + OLJFJH_03520 0.58 -0.3 680,310 + OLJFJH_03520 0.58 -0.0 680,311 - OLJFJH_03520 0.58 -0.1 680,315 - OLJFJH_03520 0.59 +0.1 680,366 + OLJFJH_03520 0.68 -1.3 680,398 - OLJFJH_03520 0.74 -0.8 680,561 + +1.1 680,561 + +0.3 680,562 - +1.8 680,592 + +1.5 680,679 - +0.4 680,679 - -0.4
Or see this region's nucleotide sequence