Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_18090 and OLJFJH_18095 are separated by 4 nucleotides OLJFJH_18095 and OLJFJH_18100 are separated by 169 nucleotides OLJFJH_18100 and OLJFJH_18105 are separated by 23 nucleotides
OLJFJH_18090: OLJFJH_18090 - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD, at 3,798,309 to 3,799,412
_18090
OLJFJH_18095: OLJFJH_18095 - transcriptional regulator NrdR, at 3,799,417 to 3,799,866
_18095
OLJFJH_18100: OLJFJH_18100 - peptidoglycan-binding protein LysM, at 3,800,036 to 3,800,479
_18100
OLJFJH_18105: OLJFJH_18105 - Putative lipoprotein yajI, at 3,800,503 to 3,801,066
_18105
Position (kb)
3799
3800 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 3799.427 kb on - strand at 3799.478 kb on - strand, within OLJFJH_18095 at 3799.497 kb on - strand, within OLJFJH_18095 at 3799.497 kb on - strand, within OLJFJH_18095 at 3799.594 kb on - strand, within OLJFJH_18095 at 3799.834 kb on - strand at 3799.834 kb on - strand at 3799.867 kb on - strand at 3800.000 kb on + strand at 3800.000 kb on + strand at 3800.024 kb on - strand at 3800.128 kb on + strand, within OLJFJH_18100 at 3800.324 kb on + strand, within OLJFJH_18100 at 3800.324 kb on + strand, within OLJFJH_18100 at 3800.325 kb on - strand, within OLJFJH_18100 at 3800.325 kb on - strand, within OLJFJH_18100 at 3800.327 kb on + strand, within OLJFJH_18100 at 3800.327 kb on + strand, within OLJFJH_18100 at 3800.327 kb on + strand, within OLJFJH_18100 at 3800.328 kb on - strand, within OLJFJH_18100 at 3800.328 kb on - strand, within OLJFJH_18100 at 3800.393 kb on + strand, within OLJFJH_18100 at 3800.467 kb on + strand at 3800.467 kb on + strand at 3800.468 kb on - strand at 3800.488 kb on + strand at 3800.488 kb on + strand at 3800.488 kb on + strand at 3800.630 kb on + strand, within OLJFJH_18105 at 3800.630 kb on + strand, within OLJFJH_18105 at 3800.630 kb on + strand, within OLJFJH_18105 at 3800.631 kb on - strand, within OLJFJH_18105 at 3800.735 kb on + strand, within OLJFJH_18105 at 3800.760 kb on - strand, within OLJFJH_18105 at 3800.811 kb on - strand, within OLJFJH_18105
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:17;Samp:8-8 remove 3,799,427 - -1.1 3,799,478 - OLJFJH_18095 0.14 -1.3 3,799,497 - OLJFJH_18095 0.18 -1.2 3,799,497 - OLJFJH_18095 0.18 -1.6 3,799,594 - OLJFJH_18095 0.39 -0.1 3,799,834 - -0.8 3,799,834 - +0.3 3,799,867 - -0.5 3,800,000 + +1.3 3,800,000 + -0.1 3,800,024 - -0.6 3,800,128 + OLJFJH_18100 0.21 +1.2 3,800,324 + OLJFJH_18100 0.65 -0.3 3,800,324 + OLJFJH_18100 0.65 -0.1 3,800,325 - OLJFJH_18100 0.65 -0.2 3,800,325 - OLJFJH_18100 0.65 +0.0 3,800,327 + OLJFJH_18100 0.66 +1.0 3,800,327 + OLJFJH_18100 0.66 -0.6 3,800,327 + OLJFJH_18100 0.66 +0.1 3,800,328 - OLJFJH_18100 0.66 +2.5 3,800,328 - OLJFJH_18100 0.66 +0.1 3,800,393 + OLJFJH_18100 0.80 +0.8 3,800,467 + -0.5 3,800,467 + -0.2 3,800,468 - -0.3 3,800,488 + -0.8 3,800,488 + -0.1 3,800,488 + -0.8 3,800,630 + OLJFJH_18105 0.23 +4.0 3,800,630 + OLJFJH_18105 0.23 +0.0 3,800,630 + OLJFJH_18105 0.23 +1.0 3,800,631 - OLJFJH_18105 0.23 -0.7 3,800,735 + OLJFJH_18105 0.41 -1.7 3,800,760 - OLJFJH_18105 0.46 +1.0 3,800,811 - OLJFJH_18105 0.55 +0.7
Or see this region's nucleotide sequence