Strain Fitness in Erwinia amylovora T8 around OLJFJH_13615
Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-8
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Matrix:pear;Phage:PBS;Temp:17;Samp:8-8 |
---|---|---|---|---|---|
remove | |||||
2,866,144 | - | -1.3 | |||
2,866,172 | + | +1.3 | |||
2,866,172 | + | -1.1 | |||
2,866,172 | + | -0.4 | |||
2,866,173 | - | -0.3 | |||
2,866,295 | - | +0.6 | |||
2,866,356 | - | -0.7 | |||
2,867,535 | + | OLJFJH_13615 | 0.64 | -1.7 | |
2,867,535 | + | OLJFJH_13615 | 0.64 | -2.0 | |
2,867,544 | + | OLJFJH_13615 | 0.66 | -0.2 | |
2,867,784 | - | -1.2 | |||
2,868,644 | + | -0.3 | |||
2,868,728 | + | -1.6 | |||
2,868,728 | + | -0.1 | |||
2,868,729 | - | +0.1 | |||
2,868,729 | - | +1.3 | |||
2,868,730 | + | -0.2 |
Or see this region's nucleotide sequence