Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_12045 and OLJFJH_12050 are separated by 165 nucleotides OLJFJH_12050 and OLJFJH_12055 are separated by 12 nucleotides OLJFJH_12055 and OLJFJH_12060 are separated by 86 nucleotides
OLJFJH_12045: OLJFJH_12045 - Amylovoran biosynthesis protein AmsC, at 2,534,015 to 2,535,142
_12045
OLJFJH_12050: OLJFJH_12050 - Amylovoran biosynthesis glycosyltransferase AmsD, at 2,535,308 to 2,536,363
_12050
OLJFJH_12055: OLJFJH_12055 - Amylovoran biosynthesis glycosyltransferase AmsE, at 2,536,376 to 2,537,176
_12055
OLJFJH_12060: OLJFJH_12060 - Amylovoran biosynthesis protein AmsF, at 2,537,263 to 2,539,494
_12060
Position (kb)
2535
2536
2537 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2534.670 kb on + strand, within OLJFJH_12045 at 2534.675 kb on - strand, within OLJFJH_12045 at 2534.747 kb on + strand, within OLJFJH_12045 at 2534.834 kb on + strand, within OLJFJH_12045 at 2535.037 kb on + strand at 2535.060 kb on - strand at 2535.136 kb on + strand at 2535.276 kb on + strand at 2535.565 kb on + strand, within OLJFJH_12050 at 2535.748 kb on + strand, within OLJFJH_12050 at 2535.884 kb on + strand, within OLJFJH_12050 at 2535.952 kb on + strand, within OLJFJH_12050 at 2536.058 kb on + strand, within OLJFJH_12050 at 2536.361 kb on + strand at 2536.596 kb on + strand, within OLJFJH_12055 at 2536.655 kb on - strand, within OLJFJH_12055 at 2536.835 kb on - strand, within OLJFJH_12055 at 2536.896 kb on - strand, within OLJFJH_12055 at 2536.999 kb on - strand, within OLJFJH_12055 at 2537.058 kb on + strand, within OLJFJH_12055
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:17;Samp:8-8 remove 2,534,670 + OLJFJH_12045 0.58 -0.9 2,534,675 - OLJFJH_12045 0.59 -3.1 2,534,747 + OLJFJH_12045 0.65 -1.1 2,534,834 + OLJFJH_12045 0.73 -1.4 2,535,037 + -2.9 2,535,060 - -2.9 2,535,136 + -1.1 2,535,276 + -1.4 2,535,565 + OLJFJH_12050 0.24 -0.2 2,535,748 + OLJFJH_12050 0.42 -3.6 2,535,884 + OLJFJH_12050 0.55 -4.5 2,535,952 + OLJFJH_12050 0.61 -3.1 2,536,058 + OLJFJH_12050 0.71 -3.0 2,536,361 + -0.8 2,536,596 + OLJFJH_12055 0.27 +1.6 2,536,655 - OLJFJH_12055 0.35 +0.7 2,536,835 - OLJFJH_12055 0.57 +0.4 2,536,896 - OLJFJH_12055 0.65 +1.9 2,536,999 - OLJFJH_12055 0.78 +0.2 2,537,058 + OLJFJH_12055 0.85 -1.8
Or see this region's nucleotide sequence