Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_07465 and OLJFJH_07470 overlap by 4 nucleotides OLJFJH_07470 and OLJFJH_07475 are separated by 199 nucleotides OLJFJH_07475 and OLJFJH_07480 are separated by 100 nucleotides OLJFJH_07480 and OLJFJH_07485 are separated by 107 nucleotides
OLJFJH_07465: OLJFJH_07465 - DNA phosphorothioation system sulfurtransferase DndC, at 1,528,699 to 1,530,333
_07465
OLJFJH_07470: OLJFJH_07470 - DNA sulfur modification protein DndB, at 1,530,330 to 1,531,415
_07470
OLJFJH_07475: OLJFJH_07475 - hypothetical protein, at 1,531,615 to 1,531,965
_07475
OLJFJH_07480: OLJFJH_07480 - hypothetical protein, at 1,532,066 to 1,532,209
_07480
OLJFJH_07485: OLJFJH_07485 - Rha family transcriptional regulator, at 1,532,317 to 1,532,514
_07485
Position (kb)
1530
1531
1532 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 1529.388 kb on + strand, within OLJFJH_07465 at 1529.527 kb on - strand, within OLJFJH_07465 at 1529.576 kb on + strand, within OLJFJH_07465 at 1529.576 kb on + strand, within OLJFJH_07465 at 1529.576 kb on + strand, within OLJFJH_07465 at 1529.576 kb on + strand, within OLJFJH_07465 at 1529.577 kb on - strand, within OLJFJH_07465 at 1529.577 kb on - strand, within OLJFJH_07465 at 1529.577 kb on - strand, within OLJFJH_07465 at 1529.577 kb on - strand, within OLJFJH_07465 at 1529.577 kb on - strand, within OLJFJH_07465 at 1529.632 kb on - strand, within OLJFJH_07465 at 1529.666 kb on - strand, within OLJFJH_07465 at 1529.708 kb on + strand, within OLJFJH_07465 at 1529.709 kb on - strand, within OLJFJH_07465 at 1529.709 kb on - strand, within OLJFJH_07465 at 1529.709 kb on - strand, within OLJFJH_07465 at 1529.709 kb on - strand, within OLJFJH_07465 at 1529.709 kb on - strand, within OLJFJH_07465 at 1529.712 kb on + strand, within OLJFJH_07465 at 1529.712 kb on + strand, within OLJFJH_07465 at 1529.734 kb on - strand, within OLJFJH_07465 at 1529.776 kb on + strand, within OLJFJH_07465 at 1529.777 kb on - strand, within OLJFJH_07465 at 1529.851 kb on - strand, within OLJFJH_07465 at 1530.081 kb on + strand, within OLJFJH_07465 at 1530.092 kb on - strand, within OLJFJH_07465 at 1530.147 kb on - strand, within OLJFJH_07465 at 1530.147 kb on - strand, within OLJFJH_07465 at 1530.148 kb on + strand, within OLJFJH_07465 at 1530.148 kb on + strand, within OLJFJH_07465 at 1530.148 kb on + strand, within OLJFJH_07465 at 1530.156 kb on + strand, within OLJFJH_07465 at 1530.157 kb on - strand, within OLJFJH_07465 at 1530.221 kb on + strand at 1530.489 kb on - strand, within OLJFJH_07470 at 1530.542 kb on - strand, within OLJFJH_07470 at 1530.553 kb on - strand, within OLJFJH_07470 at 1530.607 kb on + strand, within OLJFJH_07470 at 1530.608 kb on - strand, within OLJFJH_07470 at 1530.608 kb on - strand, within OLJFJH_07470 at 1530.644 kb on + strand, within OLJFJH_07470 at 1530.691 kb on + strand, within OLJFJH_07470 at 1530.750 kb on + strand, within OLJFJH_07470 at 1530.751 kb on - strand, within OLJFJH_07470 at 1530.786 kb on - strand, within OLJFJH_07470 at 1530.795 kb on - strand, within OLJFJH_07470 at 1530.812 kb on + strand, within OLJFJH_07470 at 1530.813 kb on - strand, within OLJFJH_07470 at 1530.841 kb on - strand, within OLJFJH_07470 at 1530.905 kb on - strand, within OLJFJH_07470 at 1531.000 kb on - strand, within OLJFJH_07470 at 1531.042 kb on - strand, within OLJFJH_07470 at 1531.042 kb on - strand, within OLJFJH_07470 at 1531.113 kb on + strand, within OLJFJH_07470 at 1531.114 kb on - strand, within OLJFJH_07470 at 1531.195 kb on + strand, within OLJFJH_07470 at 1531.196 kb on - strand, within OLJFJH_07470 at 1531.196 kb on - strand, within OLJFJH_07470 at 1531.256 kb on + strand, within OLJFJH_07470 at 1531.256 kb on + strand, within OLJFJH_07470 at 1531.372 kb on - strand at 1531.372 kb on - strand at 1531.373 kb on + strand at 1531.373 kb on + strand at 1531.374 kb on - strand at 1531.387 kb on + strand at 1531.394 kb on - strand at 1531.415 kb on + strand at 1531.415 kb on + strand at 1531.416 kb on - strand at 1531.416 kb on - strand at 1531.416 kb on - strand at 1531.416 kb on - strand at 1531.420 kb on - strand at 1531.463 kb on - strand at 1531.519 kb on - strand at 1531.534 kb on - strand at 1531.536 kb on + strand at 1531.537 kb on - strand at 1531.569 kb on + strand at 1531.569 kb on + strand at 1531.587 kb on + strand at 1531.587 kb on + strand at 1531.675 kb on - strand, within OLJFJH_07475 at 1531.717 kb on - strand, within OLJFJH_07475 at 1531.734 kb on + strand, within OLJFJH_07475 at 1531.857 kb on + strand, within OLJFJH_07475 at 1531.857 kb on + strand, within OLJFJH_07475 at 1531.857 kb on + strand, within OLJFJH_07475 at 1531.858 kb on - strand, within OLJFJH_07475 at 1531.861 kb on - strand, within OLJFJH_07475 at 1531.948 kb on - strand at 1532.214 kb on + strand at 1532.329 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:17;Samp:8-8 remove 1,529,388 + OLJFJH_07465 0.42 -1.1 1,529,527 - OLJFJH_07465 0.51 -1.3 1,529,576 + OLJFJH_07465 0.54 -0.6 1,529,576 + OLJFJH_07465 0.54 -0.8 1,529,576 + OLJFJH_07465 0.54 -1.0 1,529,576 + OLJFJH_07465 0.54 -0.4 1,529,577 - OLJFJH_07465 0.54 -0.5 1,529,577 - OLJFJH_07465 0.54 -0.4 1,529,577 - OLJFJH_07465 0.54 +0.2 1,529,577 - OLJFJH_07465 0.54 -1.0 1,529,577 - OLJFJH_07465 0.54 -0.7 1,529,632 - OLJFJH_07465 0.57 +0.5 1,529,666 - OLJFJH_07465 0.59 -1.0 1,529,708 + OLJFJH_07465 0.62 -0.9 1,529,709 - OLJFJH_07465 0.62 +0.3 1,529,709 - OLJFJH_07465 0.62 +0.3 1,529,709 - OLJFJH_07465 0.62 -0.8 1,529,709 - OLJFJH_07465 0.62 -0.4 1,529,709 - OLJFJH_07465 0.62 -0.2 1,529,712 + OLJFJH_07465 0.62 -0.1 1,529,712 + OLJFJH_07465 0.62 -0.6 1,529,734 - OLJFJH_07465 0.63 -0.1 1,529,776 + OLJFJH_07465 0.66 -0.6 1,529,777 - OLJFJH_07465 0.66 -0.6 1,529,851 - OLJFJH_07465 0.70 -0.0 1,530,081 + OLJFJH_07465 0.85 -1.9 1,530,092 - OLJFJH_07465 0.85 -0.8 1,530,147 - OLJFJH_07465 0.89 -0.5 1,530,147 - OLJFJH_07465 0.89 -0.9 1,530,148 + OLJFJH_07465 0.89 -1.9 1,530,148 + OLJFJH_07465 0.89 +0.1 1,530,148 + OLJFJH_07465 0.89 -0.5 1,530,156 + OLJFJH_07465 0.89 -1.0 1,530,157 - OLJFJH_07465 0.89 -0.1 1,530,221 + -0.2 1,530,489 - OLJFJH_07470 0.15 -1.1 1,530,542 - OLJFJH_07470 0.20 -0.0 1,530,553 - OLJFJH_07470 0.21 -1.2 1,530,607 + OLJFJH_07470 0.26 -1.1 1,530,608 - OLJFJH_07470 0.26 -0.5 1,530,608 - OLJFJH_07470 0.26 -2.4 1,530,644 + OLJFJH_07470 0.29 +0.9 1,530,691 + OLJFJH_07470 0.33 -0.7 1,530,750 + OLJFJH_07470 0.39 -1.1 1,530,751 - OLJFJH_07470 0.39 -1.9 1,530,786 - OLJFJH_07470 0.42 -3.1 1,530,795 - OLJFJH_07470 0.43 -1.7 1,530,812 + OLJFJH_07470 0.44 -0.8 1,530,813 - OLJFJH_07470 0.44 -0.3 1,530,841 - OLJFJH_07470 0.47 -1.3 1,530,905 - OLJFJH_07470 0.53 -1.3 1,531,000 - OLJFJH_07470 0.62 -1.2 1,531,042 - OLJFJH_07470 0.66 +0.6 1,531,042 - OLJFJH_07470 0.66 -0.4 1,531,113 + OLJFJH_07470 0.72 -1.1 1,531,114 - OLJFJH_07470 0.72 -0.0 1,531,195 + OLJFJH_07470 0.80 +1.3 1,531,196 - OLJFJH_07470 0.80 -1.9 1,531,196 - OLJFJH_07470 0.80 -1.5 1,531,256 + OLJFJH_07470 0.85 -0.7 1,531,256 + OLJFJH_07470 0.85 -1.3 1,531,372 - -2.6 1,531,372 - -1.5 1,531,373 + +0.0 1,531,373 + -1.2 1,531,374 - -2.3 1,531,387 + +0.5 1,531,394 - -2.7 1,531,415 + -0.9 1,531,415 + -0.7 1,531,416 - -3.2 1,531,416 - -4.8 1,531,416 - -3.5 1,531,416 - -1.2 1,531,420 - +1.9 1,531,463 - +0.6 1,531,519 - -0.9 1,531,534 - +0.3 1,531,536 + -0.7 1,531,537 - -0.1 1,531,569 + +0.1 1,531,569 + -0.6 1,531,587 + +0.3 1,531,587 + +0.2 1,531,675 - OLJFJH_07475 0.17 -0.3 1,531,717 - OLJFJH_07475 0.29 -0.3 1,531,734 + OLJFJH_07475 0.34 +0.9 1,531,857 + OLJFJH_07475 0.69 -0.2 1,531,857 + OLJFJH_07475 0.69 -0.6 1,531,857 + OLJFJH_07475 0.69 +1.9 1,531,858 - OLJFJH_07475 0.69 +1.7 1,531,861 - OLJFJH_07475 0.70 -0.3 1,531,948 - +0.3 1,532,214 + +0.8 1,532,329 - +1.8
Or see this region's nucleotide sequence