Strain Fitness in Erwinia amylovora T8 around OLJFJH_05935

Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:17;Samp:8-8
1,196,639	+		OLJFJH_05930	0.46	+0.1
1,196,639	+		OLJFJH_05930	0.46	-0.7
1,196,639	+		OLJFJH_05930	0.46	-0.3
1,196,639	+		OLJFJH_05930	0.46	-1.5
1,196,639	+		OLJFJH_05930	0.46	+0.4
1,196,639	+		OLJFJH_05930	0.46	+0.3
1,196,640	-		OLJFJH_05930	0.46	+0.4
1,196,640	-		OLJFJH_05930	0.46	+0.9
1,196,640	-		OLJFJH_05930	0.46	+0.4
1,196,810	+		OLJFJH_05930	0.58	+1.2
1,196,810	+		OLJFJH_05930	0.58	-2.5
1,196,852	+		OLJFJH_05930	0.61	-1.2
1,196,866	+		OLJFJH_05930	0.62	+0.5
1,196,866	+		OLJFJH_05930	0.62	-1.6
1,196,958	+		OLJFJH_05930	0.69	+0.2
1,196,958	+		OLJFJH_05930	0.69	-0.1
1,196,958	+		OLJFJH_05930	0.69	+0.6
1,196,959	-		OLJFJH_05930	0.69	+0.8
1,196,959	-		OLJFJH_05930	0.69	+0.0
1,196,959	-		OLJFJH_05930	0.69	-0.4
1,196,967	+		OLJFJH_05930	0.69	-0.4
1,196,967	+		OLJFJH_05930	0.69	-0.6
1,196,967	+		OLJFJH_05930	0.69	+0.7
1,197,091	+		OLJFJH_05930	0.78	+1.7
1,197,092	-		OLJFJH_05930	0.78	-0.4
1,197,195	-		OLJFJH_05930	0.86	+0.6
1,197,365	-				+0.6
1,197,483	+		OLJFJH_05935	0.14	-0.8
1,197,483	+		OLJFJH_05935	0.14	-0.3
1,197,483	+		OLJFJH_05935	0.14	-1.0
1,197,484	-		OLJFJH_05935	0.14	-0.3
1,197,484	-		OLJFJH_05935	0.14	-1.0
1,197,484	-		OLJFJH_05935	0.14	-1.2
1,197,484	-		OLJFJH_05935	0.14	-1.3
1,197,484	-		OLJFJH_05935	0.14	-0.5
1,197,484	-		OLJFJH_05935	0.14	+1.4
1,197,587	+		OLJFJH_05935	0.29	-1.6
1,197,797	+		OLJFJH_05935	0.59	-0.8
1,197,826	+		OLJFJH_05935	0.63	-1.0
1,197,862	-		OLJFJH_05935	0.68	-0.6
1,197,862	-		OLJFJH_05935	0.68	-1.0
1,197,862	-		OLJFJH_05935	0.68	+0.1
1,197,941	-		OLJFJH_05935	0.79	-1.1
1,198,009	-		OLJFJH_05935	0.89	-1.0
1,198,145	-				-0.7
1,198,223	+				-0.2
1,198,223	+				+1.7
1,198,223	+				+1.1
1,198,249	+				-0.6
1,198,250	-				+0.9
1,198,355	+		OLJFJH_05940	0.23	-0.3
1,198,356	-		OLJFJH_05940	0.23	+0.9
1,198,468	+		OLJFJH_05940	0.45	+1.8
1,198,468	+		OLJFJH_05940	0.45	+0.5
1,198,469	-		OLJFJH_05940	0.45	+0.0
1,198,469	-		OLJFJH_05940	0.45	-0.1
1,198,469	-		OLJFJH_05940	0.45	-1.4
1,198,472	+		OLJFJH_05940	0.46	+0.2
1,198,472	+		OLJFJH_05940	0.46	-1.3
1,198,473	-		OLJFJH_05940	0.46	+1.1
1,198,473	-		OLJFJH_05940	0.46	-0.3
1,198,473	-		OLJFJH_05940	0.46	-0.0
1,198,473	-		OLJFJH_05940	0.46	+1.0
1,198,506	-		OLJFJH_05940	0.52	-1.6
1,198,514	+		OLJFJH_05940	0.54	-0.6
1,198,515	-		OLJFJH_05940	0.54	+0.2
1,198,640	+		OLJFJH_05940	0.79	+0.3
1,198,695	-		OLJFJH_05940	0.89	+0.7
1,198,703	-				+0.7
1,198,703	-				-0.2
1,198,703	-				+1.6
1,198,703	-				+1.0
1,198,756	+				-1.3
1,198,789	+				-0.2
1,198,790	-				+1.3
1,198,827	+				-0.2
1,198,858	+				-1.2
1,198,858	+				+0.4
1,198,859	-				+0.4
1,198,860	+				-0.0
1,198,860	+				+0.2
1,198,860	+				+0.3
1,198,861	-				-0.8
1,198,861	-				+0.4
1,198,872	+				+0.0
1,198,873	-				-1.2
1,198,905	-				-2.1
1,198,969	+				-0.2
1,198,989	-		OLJFJH_05950	0.11	+0.5
1,198,989	-		OLJFJH_05950	0.11	-0.5
1,199,039	-		OLJFJH_05950	0.16	+0.5
1,199,053	-		OLJFJH_05950	0.18	-0.0
1,199,056	+		OLJFJH_05950	0.18	-1.0
1,199,056	+		OLJFJH_05950	0.18	-1.1