Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_00945 and OLJFJH_00950 overlap by 1 nucleotides OLJFJH_00950 and OLJFJH_00955 are separated by 46 nucleotides OLJFJH_00955 and OLJFJH_00960 are separated by 40 nucleotides OLJFJH_00960 and OLJFJH_00965 are separated by 10 nucleotides
OLJFJH_00945: OLJFJH_00945 - AMP-dependent synthetase, at 113,365 to 114,864
_00945
OLJFJH_00950: OLJFJH_00950 - acyl-CoA thioesterase, at 114,864 to 115,298
_00950
OLJFJH_00955: OLJFJH_00955 - Zn-dependent oxidoreductase, at 115,345 to 116,331
_00955
OLJFJH_00960: OLJFJH_00960 - biotin transporter BioY, at 116,372 to 116,911
_00960
OLJFJH_00965: OLJFJH_00965 - energy-coupling factor transporter transmembrane protein EcfT, at 116,922 to 117,539
_00965
Position (kb)
115
116
117 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 114.346 kb on - strand, within OLJFJH_00945 at 114.589 kb on + strand, within OLJFJH_00945 at 114.681 kb on + strand, within OLJFJH_00945 at 114.681 kb on + strand, within OLJFJH_00945 at 114.881 kb on + strand at 114.939 kb on - strand, within OLJFJH_00950 at 114.939 kb on - strand, within OLJFJH_00950 at 115.029 kb on + strand, within OLJFJH_00950 at 115.129 kb on + strand, within OLJFJH_00950 at 115.129 kb on + strand, within OLJFJH_00950 at 115.129 kb on + strand, within OLJFJH_00950 at 115.211 kb on - strand, within OLJFJH_00950 at 115.215 kb on + strand, within OLJFJH_00950 at 115.215 kb on + strand, within OLJFJH_00950 at 115.229 kb on + strand, within OLJFJH_00950 at 115.230 kb on - strand, within OLJFJH_00950 at 115.342 kb on - strand at 115.358 kb on + strand at 115.514 kb on - strand, within OLJFJH_00955 at 115.514 kb on - strand, within OLJFJH_00955 at 115.524 kb on + strand, within OLJFJH_00955 at 115.524 kb on + strand, within OLJFJH_00955 at 115.525 kb on - strand, within OLJFJH_00955 at 115.645 kb on + strand, within OLJFJH_00955 at 115.646 kb on - strand, within OLJFJH_00955 at 115.717 kb on + strand, within OLJFJH_00955 at 115.843 kb on - strand, within OLJFJH_00955 at 116.058 kb on + strand, within OLJFJH_00955 at 116.251 kb on + strand at 116.529 kb on + strand, within OLJFJH_00960 at 116.529 kb on + strand, within OLJFJH_00960 at 116.530 kb on - strand, within OLJFJH_00960 at 116.589 kb on + strand, within OLJFJH_00960 at 116.669 kb on - strand, within OLJFJH_00960 at 116.889 kb on + strand at 116.889 kb on + strand at 116.890 kb on - strand at 116.896 kb on + strand at 116.911 kb on + strand at 116.911 kb on + strand at 116.911 kb on + strand at 116.912 kb on - strand at 116.915 kb on + strand at 116.916 kb on - strand at 116.916 kb on - strand at 116.916 kb on - strand at 116.930 kb on + strand at 116.930 kb on + strand at 116.930 kb on + strand at 116.931 kb on - strand at 117.101 kb on + strand, within OLJFJH_00965 at 117.155 kb on + strand, within OLJFJH_00965 at 117.155 kb on + strand, within OLJFJH_00965 at 117.155 kb on + strand, within OLJFJH_00965 at 117.156 kb on - strand, within OLJFJH_00965 at 117.157 kb on + strand, within OLJFJH_00965 at 117.157 kb on + strand, within OLJFJH_00965 at 117.157 kb on + strand, within OLJFJH_00965 at 117.157 kb on + strand, within OLJFJH_00965 at 117.157 kb on + strand, within OLJFJH_00965 at 117.157 kb on + strand, within OLJFJH_00965 at 117.158 kb on - strand, within OLJFJH_00965 at 117.158 kb on - strand, within OLJFJH_00965 at 117.158 kb on - strand, within OLJFJH_00965 at 117.158 kb on - strand, within OLJFJH_00965 at 117.158 kb on - strand, within OLJFJH_00965 at 117.258 kb on + strand, within OLJFJH_00965 at 117.259 kb on - strand, within OLJFJH_00965 at 117.259 kb on - strand, within OLJFJH_00965
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:17;Samp:8-8 remove 114,346 - OLJFJH_00945 0.65 +0.2 114,589 + OLJFJH_00945 0.82 -0.3 114,681 + OLJFJH_00945 0.88 +0.1 114,681 + OLJFJH_00945 0.88 +0.6 114,881 + +1.0 114,939 - OLJFJH_00950 0.17 +0.2 114,939 - OLJFJH_00950 0.17 -0.2 115,029 + OLJFJH_00950 0.38 -1.0 115,129 + OLJFJH_00950 0.61 +2.4 115,129 + OLJFJH_00950 0.61 +0.4 115,129 + OLJFJH_00950 0.61 +0.5 115,211 - OLJFJH_00950 0.80 -1.1 115,215 + OLJFJH_00950 0.81 +0.2 115,215 + OLJFJH_00950 0.81 -0.3 115,229 + OLJFJH_00950 0.84 -0.4 115,230 - OLJFJH_00950 0.84 -0.9 115,342 - -0.3 115,358 + +1.0 115,514 - OLJFJH_00955 0.17 -3.7 115,514 - OLJFJH_00955 0.17 -1.2 115,524 + OLJFJH_00955 0.18 -1.9 115,524 + OLJFJH_00955 0.18 -1.7 115,525 - OLJFJH_00955 0.18 -1.5 115,645 + OLJFJH_00955 0.30 -2.1 115,646 - OLJFJH_00955 0.30 -1.6 115,717 + OLJFJH_00955 0.38 -0.9 115,843 - OLJFJH_00955 0.50 -0.5 116,058 + OLJFJH_00955 0.72 -1.0 116,251 + -1.5 116,529 + OLJFJH_00960 0.29 -0.9 116,529 + OLJFJH_00960 0.29 +1.9 116,530 - OLJFJH_00960 0.29 -0.0 116,589 + OLJFJH_00960 0.40 -0.0 116,669 - OLJFJH_00960 0.55 +0.6 116,889 + -0.7 116,889 + +0.2 116,890 - -0.7 116,896 + +0.3 116,911 + -2.2 116,911 + -0.7 116,911 + -0.2 116,912 - -0.5 116,915 + +0.2 116,916 - -0.0 116,916 - +0.3 116,916 - -0.5 116,930 + -0.5 116,930 + -0.9 116,930 + -0.1 116,931 - -0.7 117,101 + OLJFJH_00965 0.29 -0.1 117,155 + OLJFJH_00965 0.38 -1.3 117,155 + OLJFJH_00965 0.38 +1.9 117,155 + OLJFJH_00965 0.38 +0.4 117,156 - OLJFJH_00965 0.38 -0.3 117,157 + OLJFJH_00965 0.38 -0.1 117,157 + OLJFJH_00965 0.38 -0.6 117,157 + OLJFJH_00965 0.38 +1.1 117,157 + OLJFJH_00965 0.38 +2.9 117,157 + OLJFJH_00965 0.38 +0.0 117,157 + OLJFJH_00965 0.38 +0.4 117,158 - OLJFJH_00965 0.38 -0.2 117,158 - OLJFJH_00965 0.38 +0.4 117,158 - OLJFJH_00965 0.38 -0.1 117,158 - OLJFJH_00965 0.38 -1.3 117,158 - OLJFJH_00965 0.38 +1.4 117,258 + OLJFJH_00965 0.54 +0.6 117,259 - OLJFJH_00965 0.55 -0.3 117,259 - OLJFJH_00965 0.55 +0.9
Or see this region's nucleotide sequence