Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_00690 and OLJFJH_00695 overlap by 1 nucleotides OLJFJH_00695 and OLJFJH_00700 are separated by 14 nucleotides OLJFJH_00700 and OLJFJH_00705 are separated by 48 nucleotides
OLJFJH_00690: OLJFJH_00690 - Fe(3+)-hydroxamate ABC transporter permease FhuB, at 51,771 to 53,747
_00690
OLJFJH_00695: OLJFJH_00695 - Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD, at 53,747 to 54,625
_00695
OLJFJH_00700: OLJFJH_00700 - Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC, at 54,640 to 55,434
_00700
OLJFJH_00705: OLJFJH_00705 - ferrichrome porin FhuA, at 55,483 to 57,699
_00705
Position (kb) 53
54
55 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 53.128 kb on - strand, within OLJFJH_00690 at 53.143 kb on - strand, within OLJFJH_00690 at 53.229 kb on - strand, within OLJFJH_00690 at 53.229 kb on - strand, within OLJFJH_00690 at 53.229 kb on - strand, within OLJFJH_00690 at 53.229 kb on - strand, within OLJFJH_00690 at 53.236 kb on - strand, within OLJFJH_00690 at 53.250 kb on - strand, within OLJFJH_00690 at 53.250 kb on - strand, within OLJFJH_00690 at 53.936 kb on + strand, within OLJFJH_00695 at 53.937 kb on - strand, within OLJFJH_00695 at 54.251 kb on - strand, within OLJFJH_00695 at 54.293 kb on - strand, within OLJFJH_00695 at 54.445 kb on - strand, within OLJFJH_00695 at 54.450 kb on + strand, within OLJFJH_00695 at 54.450 kb on + strand, within OLJFJH_00695 at 54.451 kb on - strand, within OLJFJH_00695 at 54.451 kb on - strand, within OLJFJH_00695 at 54.451 kb on - strand, within OLJFJH_00695 at 54.547 kb on - strand at 54.631 kb on + strand at 54.645 kb on - strand at 54.704 kb on + strand at 54.704 kb on + strand at 54.704 kb on + strand at 54.704 kb on + strand at 54.705 kb on - strand at 54.705 kb on - strand at 54.705 kb on - strand at 54.705 kb on - strand at 54.705 kb on - strand at 54.707 kb on - strand at 54.707 kb on - strand at 55.173 kb on - strand, within OLJFJH_00700 at 55.173 kb on - strand, within OLJFJH_00700 at 55.173 kb on - strand, within OLJFJH_00700 at 55.303 kb on - strand, within OLJFJH_00700 at 55.303 kb on - strand, within OLJFJH_00700 at 55.357 kb on + strand at 55.565 kb on + strand at 55.594 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:17;Samp:8-8 remove 53,128 - OLJFJH_00690 0.69 -0.9 53,143 - OLJFJH_00690 0.69 +0.5 53,229 - OLJFJH_00690 0.74 -1.5 53,229 - OLJFJH_00690 0.74 -1.6 53,229 - OLJFJH_00690 0.74 -1.5 53,229 - OLJFJH_00690 0.74 -1.4 53,236 - OLJFJH_00690 0.74 -1.1 53,250 - OLJFJH_00690 0.75 -0.7 53,250 - OLJFJH_00690 0.75 -0.1 53,936 + OLJFJH_00695 0.22 -0.3 53,937 - OLJFJH_00695 0.22 +0.3 54,251 - OLJFJH_00695 0.57 -2.5 54,293 - OLJFJH_00695 0.62 -0.9 54,445 - OLJFJH_00695 0.79 -1.3 54,450 + OLJFJH_00695 0.80 +0.6 54,450 + OLJFJH_00695 0.80 -0.6 54,451 - OLJFJH_00695 0.80 -1.3 54,451 - OLJFJH_00695 0.80 -2.5 54,451 - OLJFJH_00695 0.80 -1.9 54,547 - -1.4 54,631 + -1.0 54,645 - +0.2 54,704 + -0.5 54,704 + -0.6 54,704 + -2.4 54,704 + -1.1 54,705 - +0.1 54,705 - +4.1 54,705 - -1.6 54,705 - +0.4 54,705 - -0.5 54,707 - -0.8 54,707 - -0.2 55,173 - OLJFJH_00700 0.67 +0.3 55,173 - OLJFJH_00700 0.67 -1.1 55,173 - OLJFJH_00700 0.67 -1.3 55,303 - OLJFJH_00700 0.83 -0.0 55,303 - OLJFJH_00700 0.83 +2.2 55,357 + -4.0 55,565 + -1.5 55,594 - +0.4
Or see this region's nucleotide sequence